TRIM73

General Information

Gene Name       : TRIM73
Gene ID             : ENSG00000178809.11
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: TRIM73)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TRIM73ENSG00000178809.110.030.130.08ENCSR000AEF
HepG2TRIM73ENSG00000178809.111.050.490.77ENCSR985KAT
K562TRIM73ENSG00000178809.110.110.010.06ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TRIM73 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TRIM73 RNA is bound by 2 proteins.  







eCLIP assay for TRIM73 is not avaliable on ENCORE database.





2 proteins are bound to TRIM73 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr77502463075024718+5'-UTR5.3670110.28087HepG2RBFOX2
chr77503965475039779+intron-Distal,intron-Proximal5.6399111.78182K562PRPF8
chr77503968675039783+intron-Distal,intron-Proximal6.8272916.30191HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TRIM73 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TRIM73 is not available on ENCORE database.

  • 83 RBPs can affect the levels of TRIM73.  








The Knockdown/knockout RNA-Seq assay for TRIM73 is not available on ENCORE database.





83 RBPs can affect the gene expression of TRIM73 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TRIM73ENSG00000178809.7152.2858076.448900.994103.002202.01860HepG2ABCF1
TRIM73ENSG00000178809.726.92710109.41050-2.0226011.1522010.10380HepG2ACO1
TRIM73ENSG00000178809.725.78840106.39360-2.044607.832006.98640HepG2AKAP1
TRIM73ENSG00000178809.7156.8400088.033500.833103.170702.32920HepG2ASCC1
TRIM73ENSG00000178809.793.45800161.04920-0.785103.586202.82130HepG2AUH
TRIM73ENSG00000178809.781.7999035.151201.218402.699101.81010HepG2BCLAF1
TRIM73ENSG00000178809.7187.90050109.393100.780304.322603.52660HepG2CKAP4
TRIM73ENSG00000178809.7209.63430133.799400.647702.141201.47490HepG2CNOT7
TRIM73ENSG00000178809.741.0981079.21860-0.946802.455801.84300HepG2CELF1
TRIM73ENSG00000178809.7123.6154085.150800.537702.023601.37480HepG2DAZAP1
TRIM73ENSG00000178809.720.85740101.92070-2.288809.782908.67000HepG2DDX3X
TRIM73ENSG00000178809.713.2519053.84540-2.022604.369303.15280HepG2DDX59
TRIM73ENSG00000178809.784.4607043.834600.946102.040401.46380HepG2DNAJC2
TRIM73ENSG00000178809.7203.9768093.017601.132706.105805.15940HepG2EIF4A3
TRIM73ENSG00000178809.7106.26050184.92620-0.799304.186203.47330HepG2ETF1
TRIM73ENSG00000178809.737.1660077.18300-1.054302.616101.86620HepG2FIP1L1
TRIM73ENSG00000178809.7247.2000087.055401.5056011.258109.96000HepG2G3BP1
TRIM73ENSG00000178809.7158.4556053.744001.559807.743206.70700HepG2GPKOW
TRIM73ENSG00000178809.7168.1574044.678401.912108.508007.46600HepG2HNRNPA1
TRIM73ENSG00000178809.7273.8110049.686702.4621023.9397022.13050HepG2HNRNPC
TRIM73ENSG00000178809.750.0812088.13620-0.815501.943701.35200HepG2HNRNPK
TRIM73ENSG00000178809.7146.9688049.358901.574009.926608.83570HepG2HNRNPU
TRIM73ENSG00000178809.7129.1602075.897000.766903.020302.26630HepG2IGF2BP1
TRIM73ENSG00000178809.7130.8206073.070800.840102.635401.82560HepG2LARP4
TRIM73ENSG00000178809.7192.0053093.871101.032305.008304.13440HepG2MAGOH
TRIM73ENSG00000178809.727.8506062.41420-1.164202.918802.08890HepG2MSI2
TRIM73ENSG00000178809.7155.6293096.623700.687602.317001.73500HepG2NCBP2
TRIM73ENSG00000178809.7115.3768036.579701.657104.791503.33020HepG2NONO
TRIM73ENSG00000178809.758.92690122.31170-1.053603.417002.42290HepG2PABPC1
TRIM73ENSG00000178809.7142.0239086.057300.722702.510201.81970HepG2PABPC4
TRIM73ENSG00000178809.7144.1472083.287900.791303.367002.71170HepG2PCBP1
TRIM73ENSG00000178809.7138.1261076.970000.843502.952901.88130HepG2PCBP2
TRIM73ENSG00000178809.781.6512030.662001.412903.389702.50380HepG2PRPF8
TRIM73ENSG00000178809.7173.8704080.610301.108904.353403.62560HepG2PUF60
TRIM73ENSG00000178809.7147.1103085.512500.782603.343802.60810HepG2PUM2
TRIM73ENSG00000178809.7170.5730091.785300.894004.077403.33920HepG2QKI
TRIM73ENSG00000178809.729.3787074.27400-1.338103.005902.27340HepG2RAVER1
TRIM73ENSG00000178809.797.56930154.55990-0.663702.543002.04090HepG2RBM22
TRIM73ENSG00000178809.7136.7444083.300600.715002.489901.84650HepG2RBM25
TRIM73ENSG00000178809.7144.1631094.316800.612002.029001.55050HepG2NELFE
TRIM73ENSG00000178809.7159.6157087.842500.861503.826303.11730HepG2RECQL
TRIM73ENSG00000178809.7124.7507072.966700.773602.332801.46500HepG2RPS10
TRIM73ENSG00000178809.796.9558053.027100.870502.500201.91330HepG2RPS19
TRIM73ENSG00000178809.7147.3313075.412900.966103.778402.84710HepG2RPS2
TRIM73ENSG00000178809.754.8821092.33510-0.750502.105501.51610HepG2SF3A3
TRIM73ENSG00000178809.7150.5618088.234600.770803.018002.40350HepG2SF3B4
TRIM73ENSG00000178809.7124.22720174.56230-0.490801.968001.52390HepG2SRFBP1
TRIM73ENSG00000178809.7169.6996092.097400.881704.042403.49770HepG2SRSF1
TRIM73ENSG00000178809.7136.3107075.721900.848003.790102.99470HepG2SRSF7
TRIM73ENSG00000178809.7351.26930151.548501.2127013.9621012.98810HepG2SSB
TRIM73ENSG00000178809.799.6260039.606201.330703.127002.41250HepG2SUPV3L1
TRIM73ENSG00000178809.7137.8909082.779700.736102.800302.23710HepG2TAF15
TRIM73ENSG00000178809.7170.9344047.998001.8323012.9465012.00130HepG2TIAL1
TRIM73ENSG00000178809.7144.8503078.768100.878803.788202.75080HepG2TUFM
TRIM73ENSG00000178809.725.2935065.99500-1.383603.423502.73010HepG2U2AF1
TRIM73ENSG00000178809.7144.7629084.169200.782203.247602.12280HepG2UTP18
TRIM73ENSG00000178809.744.8029079.05890-0.819302.021601.49340HepG2UTP3
TRIM73ENSG00000178809.7182.9261038.988302.2300012.0554010.56430HepG2XRN2
TRIM73ENSG00000178809.7120.5529076.303800.659702.307901.68740HepG2ZC3H8
TRIM73ENSG00000178809.736.3512090.06020-1.308905.084704.39880HepG2ZNF622
TRIM73ENSG00000178809.738.683805.828102.730503.444901.52330K562ADAR
TRIM73ENSG00000178809.7111.3953017.024902.7099012.5496011.43010K562AQR
TRIM73ENSG00000178809.739.8066013.649601.544102.705601.75580K562BCLAF1
TRIM73ENSG00000178809.756.844308.999102.659102.290001.50350K562BOP1
TRIM73ENSG00000178809.759.626009.456602.656506.740505.03380K562CNOT7
TRIM73ENSG00000178809.753.951409.562102.496206.351105.16320K562CPSF6
TRIM73ENSG00000178809.733.4489010.355301.691502.554301.54480K562CSTF2
TRIM73ENSG00000178809.763.5722021.580801.558502.335101.43940K562CELF1
TRIM73ENSG00000178809.747.6681014.097601.757504.123603.34950K562DDX47
TRIM73ENSG00000178809.730.123806.137902.295003.659902.10330K562DNAJC21
TRIM73ENSG00000178809.736.025807.359702.291204.027402.90910K562EFTUD2
TRIM73ENSG00000178809.733.125407.877402.072003.064901.97480K562EIF3D
TRIM73ENSG00000178809.789.1956020.030702.154709.404507.88630K562EIF4A3
TRIM73ENSG00000178809.746.4654017.570201.402903.132002.13480K562EIF4G2
TRIM73ENSG00000178809.747.2405017.137701.462803.269101.87470K562EXOSC5
TRIM73ENSG00000178809.737.157508.262602.168903.953502.84510K562FTO
TRIM73ENSG00000178809.741.885209.124202.198603.899102.96270K562GPKOW
TRIM73ENSG00000178809.768.7566020.595201.739104.392203.44430K562GRSF1
TRIM73ENSG00000178809.744.730608.844002.338404.397502.40620K562HNRNPAB
TRIM73ENSG00000178809.7203.695509.618504.4044037.8247035.69160K562HNRNPC
TRIM73ENSG00000178809.723.554807.263401.697202.180501.42950K562MAGOH
TRIM73ENSG00000178809.735.564408.908501.997103.282802.32790K562METAP2
TRIM73ENSG00000178809.752.6774018.731801.491603.571302.28740K562MSI2
TRIM73ENSG00000178809.752.0590011.384102.193003.588302.67530K562MTPAP
TRIM73ENSG00000178809.765.8346012.648902.379707.775906.61250K562NSUN2
TRIM73ENSG00000178809.797.3651019.173402.344207.344806.01270K562PUF60
TRIM73ENSG00000178809.744.5575020.372501.128902.434501.43850K562PUM1
TRIM73ENSG00000178809.791.2795019.982902.191406.106204.66160K562PUM2
TRIM73ENSG00000178809.731.856006.770402.234204.070603.03030K562RBM22
TRIM73ENSG00000178809.745.0171012.481101.850604.114003.13130K562SF3A3
TRIM73ENSG00000178809.732.942008.696501.921302.774501.79930K562SF3B1
TRIM73ENSG00000178809.715.962103.300902.273602.282101.50810K562SF3B4
TRIM73ENSG00000178809.727.681206.283802.139103.209501.84130K562SLBP
TRIM73ENSG00000178809.724.349906.916701.815702.252301.60650K562SRSF1
TRIM73ENSG00000178809.774.2880037.029001.004402.601901.47140K562SRSF7
TRIM73ENSG00000178809.741.060508.426202.284703.993202.01910K562STIP1
TRIM73ENSG00000178809.735.376806.930902.351603.892302.67200K562SUPV3L1
TRIM73ENSG00000178809.730.954507.337202.076802.990001.92360K562UCHL5
TRIM73ENSG00000178809.742.2680011.476101.880804.076803.00600K562WDR3
TRIM73ENSG00000178809.734.951007.474002.225303.797102.29890K562XRN2
TRIM73ENSG00000178809.757.8923019.179501.593704.318303.20280K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TRIM73 is not available on ENCORE database.






No RBPs affect the alternative splcing events of TRIM73 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TRIM73 is not avaliable on ENCORE database.