TMEM25

General Information

Gene Name       : TMEM25
Gene ID             : ENSG00000149582.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TMEM25)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TMEM25ENSG00000149582.152.245.093.67ENCSR000AEF
HepG2TMEM25ENSG00000149582.157.085.786.43ENCSR985KAT
K562TMEM25ENSG00000149582.152.431.832.13ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TMEM25 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on TMEM25 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for TMEM25 is not avaliable on ENCORE database.






NO known proteins are bound to TMEM25 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for TMEM25 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TMEM25 is not available on ENCORE database.

  • 68 RBPs can affect the levels of TMEM25.  








The Knockdown/knockout RNA-Seq assay for TMEM25 is not available on ENCORE database.





68 RBPs can affect the gene expression of TMEM25 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TMEM25ENSG00000149582.11189.73540301.18100-0.666603.453602.57670HepG2ASCC1
TMEM25ENSG00000149582.11430.75250343.315800.327202.024801.42010HepG2AUH
TMEM25ENSG00000149582.11290.00850156.240200.892204.420303.30810HepG2BCLAF1
TMEM25ENSG00000149582.11228.95900164.499900.476901.836701.34030HepG2BOP1
TMEM25ENSG00000149582.11252.41070151.015800.741003.744802.95790HepG2CPSF6
TMEM25ENSG00000149582.11383.18700167.193201.1964011.4825010.21310HepG2DDX21
TMEM25ENSG00000149582.11490.96110348.683600.493602.728102.10520HepG2DDX3X
TMEM25ENSG00000149582.11359.58500176.844001.023805.738504.67250HepG2DDX55
TMEM25ENSG00000149582.11345.69440232.893200.569703.209402.12750HepG2DDX5
TMEM25ENSG00000149582.11257.00550164.271900.645604.435903.64420HepG2DNAJC2
TMEM25ENSG00000149582.11387.21320287.941600.427302.007401.49280HepG2EIF2S1
TMEM25ENSG00000149582.11200.23250309.82760-0.629802.582701.91660HepG2EIF4B
TMEM25ENSG00000149582.11176.27380292.15930-0.728904.818003.76380HepG2EIF4G1
TMEM25ENSG00000149582.11371.36440279.864700.408002.045101.33740HepG2EIF4G2
TMEM25ENSG00000149582.11157.32630232.45600-0.563202.652401.83480HepG2EWSR1
TMEM25ENSG00000149582.11289.00620192.252300.588002.497201.43500HepG2FUS
TMEM25ENSG00000149582.11339.45260171.177100.987606.559305.60140HepG2GPKOW
TMEM25ENSG00000149582.11269.64960186.116200.534802.343501.70050HepG2HNRNPC
TMEM25ENSG00000149582.11362.87060269.723300.427902.855202.17270HepG2HNRNPL
TMEM25ENSG00000149582.11233.30940163.358500.514101.918101.38570HepG2HNRNPLL
TMEM25ENSG00000149582.11282.39430184.885700.611004.053303.33050HepG2HNRNPU
TMEM25ENSG00000149582.11467.50520330.304300.501102.400601.63070HepG2LARP4
TMEM25ENSG00000149582.11226.89070321.18530-0.501402.239801.64760HepG2MAGOH
TMEM25ENSG00000149582.11264.98880164.903300.684204.440003.52640HepG2PPIL4
TMEM25ENSG00000149582.11187.37000297.33630-0.666203.913903.11880HepG2PUM2
TMEM25ENSG00000149582.11237.02030369.87590-0.642004.728404.05590HepG2NELFE
TMEM25ENSG00000149582.11374.45390248.045300.594103.557802.79960HepG2RPLP0
TMEM25ENSG00000149582.11207.1073095.674601.114102.673901.35310HepG2SF1
TMEM25ENSG00000149582.11347.62530268.785000.371002.275301.62900HepG2SLBP
TMEM25ENSG00000149582.11302.07960179.906600.747603.150602.31500HepG2SNRNP70
TMEM25ENSG00000149582.11212.98750361.17260-0.761906.158905.52190HepG2SRSF1
TMEM25ENSG00000149582.11423.43380323.075800.390202.643602.13830HepG2SSB
TMEM25ENSG00000149582.11203.26020298.92510-0.556502.638301.38420HepG2SSRP1
TMEM25ENSG00000149582.11116.29420176.01890-0.598002.278801.65720HepG2SUPV3L1
TMEM25ENSG00000149582.11376.31230159.253301.2405011.5384010.21110HepG2TARDBP
TMEM25ENSG00000149582.11287.55810179.651200.678604.214703.62620HepG2TIAL1
TMEM25ENSG00000149582.11291.15930181.257000.683704.972504.26080HepG2TRIM56
TMEM25ENSG00000149582.11239.1530099.445901.265803.312902.22960HepG2U2AF2
TMEM25ENSG00000149582.11261.51750161.109300.698802.188801.30270HepG2UPF2
TMEM25ENSG00000149582.11304.66980211.632900.525603.384302.65270HepG2ZC3H8
TMEM25ENSG00000149582.11366.55190265.580500.464803.344002.75920HepG2ZNF622
TMEM25ENSG00000149582.11275.49860119.621501.2035010.711509.68860K562AGGF1
TMEM25ENSG00000149582.11290.91300124.473701.224604.983304.09580K562AKAP8L
TMEM25ENSG00000149582.11186.59700108.862300.777303.243702.61790K562AQR
TMEM25ENSG00000149582.11118.6228074.531500.670402.284101.41290K562BCLAF1
TMEM25ENSG00000149582.11135.9484050.324001.433606.929705.68090K562CPSF6
TMEM25ENSG00000149582.11189.09690122.481200.626502.723601.52300K562DDX21
TMEM25ENSG00000149582.11186.07590113.256400.716203.615202.88260K562DDX47
TMEM25ENSG00000149582.1150.9896099.42610-0.963403.174402.29830K562EIF4A3
TMEM25ENSG00000149582.11106.3931050.164101.084603.159101.40580K562ESF1
TMEM25ENSG00000149582.11125.5850070.666100.829503.250701.86330K562EXOSC5
TMEM25ENSG00000149582.11101.9559051.221500.993003.073702.16760K562FMR1
TMEM25ENSG00000149582.1136.89680103.39940-1.486706.238305.38450K562FXR1
TMEM25ENSG00000149582.1120.5416066.68320-1.698804.819203.82630K562G3BP2
TMEM25ENSG00000149582.1197.7843048.039501.025303.131102.28950K562GPKOW
TMEM25ENSG00000149582.11182.57330118.652000.621602.214001.53360K562GRSF1
TMEM25ENSG00000149582.11228.68630113.721201.007807.072605.64210K562HNRNPU
TMEM25ENSG00000149582.11230.97470132.090400.806104.682503.55860K562KIF1C
TMEM25ENSG00000149582.1135.6675082.88200-1.216504.362003.30220K562MAGOH
TMEM25ENSG00000149582.1196.9629046.895101.047903.185902.24240K562METAP2
TMEM25ENSG00000149582.11185.88100103.720800.841602.842201.94570K562NAA15
TMEM25ENSG00000149582.11174.15430104.471500.737203.249402.44550K562NSUN2
TMEM25ENSG00000149582.11164.6447092.295100.834902.646201.44470K562PABPC1
TMEM25ENSG00000149582.11157.1740071.529701.135603.374802.24900K562PABPN1
TMEM25ENSG00000149582.1194.3265053.558000.816502.314101.56470K562PPIG
TMEM25ENSG00000149582.11174.6093085.007201.038402.927501.42070K562PPP1R8
TMEM25ENSG00000149582.1130.8749068.37760-1.147102.298001.61210K562PRPF8
TMEM25ENSG00000149582.11125.8026073.197500.781202.435701.59240K562PSIP1
TMEM25ENSG00000149582.1137.4059080.52790-1.106203.597602.85140K562PTBP1
TMEM25ENSG00000149582.11187.59510120.275100.641202.844602.24430K562RBM15
TMEM25ENSG00000149582.1134.2368081.24140-1.246704.088702.72860K562NELFE
TMEM25ENSG00000149582.11153.9947065.396001.235503.171601.85840K562SF1
TMEM25ENSG00000149582.11168.88640103.072700.712303.271602.38760K562SF3A3
TMEM25ENSG00000149582.11130.5212074.860900.801902.717101.78050K562TRIM56
TMEM25ENSG00000149582.11106.6669055.203200.950203.211001.68980K562TRIP6
TMEM25ENSG00000149582.11202.26160110.772600.868504.981504.04810K562UPF1
TMEM25ENSG00000149582.11121.1293070.025800.790502.713601.52480K562UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TMEM25 is not available on ENCORE database.





8 RBPs can affect the splicing of TMEM25 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETMEM25ENSG00000149582.11chr11+118404134118404266118403746118403922118404571118404602-0.508000.002060.05466excludedK562AKAP8L
SETMEM25ENSG00000149582.11chr11+118404134118404266118403746118403922118404571118404602-0.738000.000000.00002excludedK562PUS1
SETMEM25ENSG00000149582.11chr11+118404134118404266118403746118403922118404571118404602-0.697000.000000.00032excludedK562RBM15
MXETMEM25ENSG00000149582.11chr11+118403631118403922118404134118404266118402864118403176118404571118404602-0.264000.000290.033892includedHepG2FUBP3
MXETMEM25ENSG00000149582.11chr11+1184036311184039221184041341184042661184028641184031761184045711184046020.594000.000710.024931includedK562RBM15
MXETMEM25ENSG00000149582.11chr11+1184036311184039221184041341184042661184028641184031761184045711184046020.653000.000210.005921includedK562PUS1
MXETMEM25ENSG00000149582.11chr11+1184028641184031761184036311184039221184024891184025861184045711184046020.413000.000110.060491includedHepG2NKRF
MXETMEM25ENSG00000149582.11chr11+1184036311184039221184041341184042661184028641184031761184045711184046020.250000.000080.009201includedHepG2NOL12
MXETMEM25ENSG00000149582.11chr11+118402864118403176118403631118403922118402489118402586118404571118404602-0.383000.001390.010652includedHepG2U2AF2
MXETMEM25ENSG00000149582.11chr11+1184036311184039221184041341184042661184028641184031761184045711184046020.266000.000210.011701includedHepG2HNRNPL

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TMEM25 is not avaliable on ENCORE database.