TMEM189-UBE2V1

General Information

Gene Name       : TMEM189-UBE2V1
Gene ID             : ENSG00000124208.16
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: TMEM189-UBE2V1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TMEM189-UBE2V1ENSG00000124208.160.000.170.09ENCSR000AEF
HepG2TMEM189-UBE2V1ENSG00000124208.161.670.000.83ENCSR985KAT
K562TMEM189-UBE2V1ENSG00000124208.160.720.410.56ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TMEM189-UBE2V1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TMEM189-UBE2V1 RNA is bound by 46 proteins.  







eCLIP assay for TMEM189-UBE2V1 is not avaliable on ENCORE database.





46 proteins are bound to TMEM189-UBE2V1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr204869828548698325-3'-UTR,intron-Distal3.337045.80916K562IGF2BP2
chr204869809748698121-3'-UTR,intron-Distal3.091768.13949K562YBX3
chr204869838148698433-3'-UTR,intron-Distal3.094876.03994HepG2IGF2BP3
chr204869816548698198-3'-UTR,intron-Distal3.7918514.19985K562YBX3
chr204869829148698303-3'-UTR,intron-Distal3.371246.82055K562YBX3
chr204869873648698744-3'-UTR,intron-Distal4.619145.82109K562IGF2BP2
chr204869863048698700-3'-UTR,intron-Distal3.573226.27891HepG2PCBP2
chr204869863048698756-3'-UTR,intron-Distal3.8136712.46969K562HNRNPK
chr204869868048698754-3'-UTR,intron-Distal3.5223610.18537K562PCBP1
chr204869837648698425-3'-UTR,intron-Distal3.413694.88918K562IGF2BP1
chr204869867848698736-3'-UTR,intron-Distal3.0793811.75503K562IGF2BP2
chr204869885148698907-3'-UTR,intron-Distal4.7800733.34638HepG2PCBP2
chr204869804048698114-3'-UTR,intron-Distal3.694555.67234K562NOLC1
chr204869838248698401-3'-UTR,intron-Distal4.4414110.17675HepG2IGF2BP1
chr204869865648698746-3'-UTR,intron-Distal3.269219.98485HepG2IGF2BP1
chr204869890248698937-3'-UTR,intron-Distal3.5082618.42193K562IGF2BP2
chr204869886948698941-3'-UTR,intron-Distal3.5464823.01809K562PCBP1
chr204869893748698956-3'-UTR,intron-Distal3.8659010.05981K562IGF2BP2
chr204869840148698434-3'-UTR,intron-Distal4.1635011.85805HepG2IGF2BP1
chr204869886048698902-3'-UTR,intron-Distal3.2310515.75429K562IGF2BP2
chr204869879348698835-3'-UTR,intron-Distal3.073786.34759K562IGF2BP2
chr204869814348698165-3'-UTR,intron-Distal3.8698814.96666K562YBX3
chr204869890748698957-3'-UTR,intron-Distal5.3904935.62854HepG2PCBP2
chr204869843448698475-3'-UTR,intron-Distal3.707589.68137K562IGF2BP2
chr204869868448698739-3'-UTR,intron-Distal3.610576.04838HepG2IGF2BP3
chr204869852148698586-3'-UTR,intron-Distal4.080386.63081HepG2IGF2BP3
chr204869853348698582-3'-UTR,intron-Distal3.2260210.24941HepG2PCBP2
chr204869838148698434-3'-UTR,intron-Distal4.5901917.75277K562IGF2BP2
chr204869858248698630-3'-UTR,intron-Distal3.137467.04306HepG2PCBP2
chr204869904548699110-3'-UTR,intron-Distal,intron-Proximal3.008435.95218K562IGF2BP1
chr204869812148698143-3'-UTR,intron-Distal3.223988.52352K562YBX3
chr204869870248698752-3'-UTR,intron-Distal5.2166222.99645HepG2PCBP2
chr204877007648770142-CDS,intron-Distal3.851563.47999HepG2YBX3
chr204871317748713234-CDS,intron-Distal,intron-Proximal3.226706.79825HepG2GRWD1
chr204869941348699466-3'-UTR,CDS,intron-Distal3.443498.25127K562U2AF2
chr204874457348744607-3'-UTR,CDS,intron-Distal3.738785.84087HepG2IGF2BP1
chr204869942748699476-3'-UTR,CDS,intron-Distal3.6346919.59476K562SF3B4
chr204874617848746191-3'-UTR,CDS,intron-Distal3.7551712.34190K562YBX3
chr204875999748760083-5'-UTR,CDS,intron-Distal,intron-Proximal3.551047.13280HepG2PRPF8
chr204875994448760042-5'-UTR,CDS,intron-Distal,intron-Proximal3.721166.90374HepG2RBM22
chr204877000948770055-CDS,intron-Distal4.406474.28193HepG2AQR
chr204869943448699502-3'-UTR,CDS,intron-Distal3.8922313.64049HepG2SF3A3
chr204874451148744552-3'-UTR,CDS,intron-Distal,intron-Proximal3.672293.33095HepG2IGF2BP3
chr204877005348770117-CDS,intron-Distal4.8014358.56905HepG2DDX3X
chr204877005248770149-CDS,intron-Distal4.130357.73437HepG2RPS3
chr204874451048744538-3'-UTR,CDS,intron-Distal,intron-Proximal3.921516.34884HepG2IGF2BP1
chr204876012448760159-5'-UTR,CDS,intron-Distal,intron-Proximal4.631509.60311HepG2DDX3X
chr204876005648760124-5'-UTR,CDS,intron-Distal4.4085528.94777HepG2DDX3X
chr204874446048744522-3'-UTR,CDS,intron-Distal,intron-Proximal3.007876.41150HepG2PRPF8
chr204874460748744625-3'-UTR,CDS,intron-Distal3.379984.47204HepG2IGF2BP1
chr204874611848746157-3'-UTR,CDS,intron-Distal3.239354.29172K562YBX3
chr204877013848770190-5'-UTR,CDS,intron-Distal,intron-Proximal5.3919764.80604HepG2DDX3X
chr204877011848770175-CDS,intron-Distal,intron-Proximal4.538957.13477K562DDX3X
chr204871317048713228-CDS,intron-Distal,intron-Proximal4.077838.78209HepG2PRPF8
chr204874619148746223-3'-UTR,CDS,intron-Distal3.4456211.42474K562YBX3
chr204874621648746288-3'-UTR,CDS,intron-Distal,intron-Proximal5.006434.40745K562SF3B4
chr204874453848744564-3'-UTR,CDS,intron-Distal4.415604.84422HepG2IGF2BP1
chr204871323648713346-CDS,intron-Distal3.564515.91267K562TRA2A
chr204874458348744626-3'-UTR,CDS,intron-Distal3.175154.14719K562IGF2BP2
chr204871317748713237-CDS,intron-Distal,intron-Proximal3.867475.90528HepG2AQR
chr204874739148747432-3'-UTR,CDS,intron-Distal,intron-Proximal3.573673.64266HepG2PPIG
chr204870551448705616-intron-Distal5.1389922.70218K562METAP2
chr204872511048725199-intron-Distal4.0390311.22696HepG2SUGP2
chr204877000948770042-intron-Distal3.789926.80869K562AQR
chr204874168948741715-3'-UTR,CDS,intron-Distal3.505334.30970K562IGF2BP2
chr204874111448741165-3'-UTR,intron-Distal4.760597.01394HepG2AKAP1
chr204871121548711325-intron-Distal3.391334.34008K562HNRNPK
chr204872938648729453-intron-Distal4.3344315.17310HepG2EFTUD2
chr204876954548769711-intron-Distal3.181383.75373K562HNRNPK
chr204877019148770250-5'-UTR,intron-Distal,intron-Proximal4.874877.55366K562DDX3X
chr204874076448740792-3'-UTR,intron-Distal5.5143921.69930K562PUM2
chr204874081648740842-3'-UTR,intron-Distal3.7071010.05497K562PUM2
chr204876359448763611-intron-Distal4.246727.94777HepG2RBFOX2
chr204876959748769721-intron-Distal5.278589.77805HepG2HNRNPK
chr204872938848729459-intron-Distal3.264335.40117HepG2PRPF4
chr204874078648740838-3'-UTR,intron-Distal4.002908.37957HepG2DDX55
chr204872428448724331-intron-Distal3.352226.55984HepG2SUGP2
chr204877018448770259-5'-UTR,intron-Distal,intron-Proximal3.936759.74704HepG2NCBP2
chr204872575748725789-intron-Distal3.146473.00129HepG2SUGP2
chr204872947348729540-intron-Distal4.182608.04968HepG2EFTUD2
chr204874105648741092-3'-UTR,intron-Distal4.302723.95192HepG2UPF1
chr204874116848741295-3'-UTR,intron-Distal5.0792818.02948HepG2UPF1
chr204874112348741163-3'-UTR,intron-Distal3.514146.62719HepG2LARP4
chr204874079248740816-3'-UTR,intron-Distal4.4798921.16718K562PUM2
chr204870303748703119-intron-Distal6.3889216.20061HepG2XPO5
chr204872475648724829-intron-Distal3.846768.92701HepG2MATR3
chr204874130548741352-3'-UTR,intron-Distal3.506837.19520HepG2AKAP1
chr204871126148711308-intron-Distal4.061968.23134HepG2HNRNPK
chr204874118848741245-3'-UTR,intron-Distal4.504594.48994K562RBM15
chr204872932548729386-intron-Distal5.106608.79061HepG2EFTUD2
chr204876935448769404-intron-Distal4.055053.57018HepG2HNRNPK
chr204874116648741227-3'-UTR,intron-Distal3.605258.57838HepG2DDX55
chr204870652448706683-intron-Distal4.373998.87911K562FMR1
chr204870659348706690-intron-Distal3.782396.63958HepG2CSTF2
chr204872473748724806-intron-Distal3.311548.05798HepG2SUGP2
chr204870657048706593-intron-Distal3.849415.75194HepG2CSTF2
chr204872482948724903-intron-Distal3.558785.72064HepG2MATR3
chr204872436848724429-intron-Distal3.861876.02877HepG2SUGP2
chr204875959148759659-intron-Distal3.925383.31570HepG2HNRNPK
chr204874129848741405-3'-UTR,intron-Distal3.9817811.72499HepG2UPF1
chr204871155548711649-intron-Distal3.739905.82614HepG2HNRNPL
chr204876935148769411-intron-Distal3.370804.14131HepG2DDX59
chr204871123948711261-intron-Distal3.661615.84244HepG2HNRNPK
chr204874110548741168-3'-UTR,intron-Distal4.347809.01880HepG2UPF1
chr204872525748725308-intron-Distal3.238154.46004HepG2SUGP2
chr204872932448729397-intron-Distal3.430998.99043HepG2CSTF2T
chr204870547748705558-intron-Distal6.1247680.61938K562CSTF2T
chr204870558748705597-intron-Distal4.9993511.92331HepG2CSTF2
chr204874147248741517-3'-UTR,intron-Distal,intron-Proximal4.599115.85529K562RBM15
chr204870549648705587-intron-Distal6.7598148.07981HepG2CSTF2
chr204874135248741404-3'-UTR,intron-Distal4.3107612.52598HepG2AKAP1
chr204870551448705581-intron-Distal5.8257938.60821K562FMR1
chr204874071948740790-3'-UTR,intron-Distal4.601058.37665HepG2FUBP3
chr204874164448741679-3'-UTR,CDS,intron-Distal3.234803.34573K562IGF2BP2
chr204870052048700604-intron-Distal,intron-Proximal3.349564.63188HepG2CDC40
chr204877004548770054-intron-Distal4.027315.63763K562AQR
chr204875988548759963-intron-Distal,intron-Proximal3.985933.08314K562TARDBP
chr204870558148705599-intron-Distal6.2006418.13587K562FMR1
chr204874144248741517-3'-UTR,intron-Distal,intron-Proximal3.598664.29472K562IGF2BP1
chr204874072048740764-3'-UTR,intron-Distal5.8737020.03145K562PUM2
chr204872480648724888-intron-Distal3.9684012.83735HepG2SUGP2
chr204877019048770248-5'-UTR,intron-Distal,intron-Proximal5.0200838.17479HepG2DDX3X
chr204871187548711957-intron-Distal3.7241312.90260HepG2U2AF2
chr204876888848768946-intron-Distal3.988933.89592K562XRCC6
chr204869947648699501-intron-Distal4.7538116.70946K562SF3B4
chr204872478948724880-intron-Distal3.178853.71597K562MATR3
chr204874110948741155-3'-UTR,intron-Distal4.801434.16557K562DDX6
chr204870555848705600-intron-Distal5.9287770.57684K562CSTF2T
chr204872623848726290-intron-Distal3.135153.84371HepG2HNRNPC
chr204871154548711651-intron-Distal3.051715.53010K562HNRNPL
chr204870539848705474-intron-Distal4.6646711.16049K562KHSRP
chr204874119448741272-3'-UTR,intron-Distal4.650496.97460K562PCBP1
chr204874079048740839-3'-UTR,intron-Distal3.586185.67957K562UPF1
chr204874119348741239-3'-UTR,intron-Distal3.450035.27408HepG2LARP4
chr204874146848741523-3'-UTR,intron-Distal,intron-Proximal4.140354.39443HepG2IGF2BP3
chr204874077448740837-3'-UTR,intron-Distal3.561235.80891HepG2LARP4
chr204876356748763594-intron-Distal5.299279.44415HepG2RBFOX2
chr204870650548706570-intron-Distal5.170118.01538HepG2CSTF2
chr204872931548729383-intron-Distal3.229225.14779HepG2FAM120A
chr204870620048706244-intron-Distal3.399377.08576K562CSTF2T
chr204870652448706617-intron-Distal3.6377311.13052HepG2CSTF2T
chr204872386248723878-intron-Distal4.016543.39864HepG2SUGP2
chr204870265748702769-intron-Distal3.624024.48425K562CSTF2T
chr204872936348729445-intron-Distal3.267203.20886K562PRPF8
chr204874168548741716-3'-UTR,CDS,intron-Distal3.567184.47204HepG2IGF2BP1
chr204874104148741094-3'-UTR,intron-Distal3.447413.06830K562UPF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TMEM189-UBE2V1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TMEM189-UBE2V1 is not available on ENCORE database.

  • 31 RBPs can affect the levels of TMEM189-UBE2V1.  








The Knockdown/knockout RNA-Seq assay for TMEM189-UBE2V1 is not available on ENCORE database.





31 RBPs can affect the gene expression of TMEM189-UBE2V1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TMEM189-UBE2V1ENSG00000124208.1613.905200.0000099999.999904.464803.23640HepG2ADAR
TMEM189-UBE2V1ENSG00000124208.1614.601700.0000099999.999904.015602.74720HepG2CSTF2
TMEM189-UBE2V1ENSG00000124208.160.6057058.95970-6.605005.447704.02820HepG2FTO
TMEM189-UBE2V1ENSG00000124208.160.0000063.71040-99999.999996.452905.53680HepG2HNRNPLL
TMEM189-UBE2V1ENSG00000124208.1615.361400.0000099999.999904.805804.02480HepG2HNRNPU
TMEM189-UBE2V1ENSG00000124208.160.0000056.47540-99999.999995.908404.84060HepG2NSUN2
TMEM189-UBE2V1ENSG00000124208.1635.731000.0000099999.999903.404801.37250HepG2NUFIP2
TMEM189-UBE2V1ENSG00000124208.160.0000029.56040-99999.999998.360405.09660HepG2PPIG
TMEM189-UBE2V1ENSG00000124208.1619.463300.0000099999.999904.144603.31020HepG2SF3A3
TMEM189-UBE2V1ENSG00000124208.1645.886000.0000099999.9999010.882808.02150HepG2SNRNP200
TMEM189-UBE2V1ENSG00000124208.160.0000030.33690-99999.999998.398006.34210HepG2SSRP1
TMEM189-UBE2V1ENSG00000124208.160.0000029.79660-99999.999998.329706.58690HepG2TBRG4
TMEM189-UBE2V1ENSG00000124208.1612.705500.0000099999.999903.540901.88560HepG2TRA2A
TMEM189-UBE2V1ENSG00000124208.1617.060700.0000099999.999905.291904.50800HepG2UTP3
TMEM189-UBE2V1ENSG00000124208.1610.962100.0000099999.999902.818601.58170K562ABCF1
TMEM189-UBE2V1ENSG00000124208.1664.152500.0000099999.999909.713707.69620K562CNOT7
TMEM189-UBE2V1ENSG00000124208.1632.929000.0000099999.999909.089007.64830K562CPSF6
TMEM189-UBE2V1ENSG00000124208.1610.578000.0000099999.999903.559302.03610K562DDX27
TMEM189-UBE2V1ENSG00000124208.16158.0477011.529003.7769024.5817020.22500K562DDX55
TMEM189-UBE2V1ENSG00000124208.1610.981000.0000099999.999902.929101.99060K562EFTUD2
TMEM189-UBE2V1ENSG00000124208.1644.923900.0000099999.999907.017105.62980K562FMR1
TMEM189-UBE2V1ENSG00000124208.1655.453200.0000099999.999906.337405.13770K562GPKOW
TMEM189-UBE2V1ENSG00000124208.1691.550900.0000099999.9999023.7146019.61850K562HNRNPA0
TMEM189-UBE2V1ENSG00000124208.1672.219000.0000099999.999902.619901.71500K562KRR1
TMEM189-UBE2V1ENSG00000124208.1635.7108010.421601.776702.458501.46500K562MAK16
TMEM189-UBE2V1ENSG00000124208.1620.022700.0000099999.999905.634904.35640K562METAP2
TMEM189-UBE2V1ENSG00000124208.1626.616406.674301.995502.880402.05550K562MTPAP
TMEM189-UBE2V1ENSG00000124208.1622.744900.0000099999.999907.154305.71910K562PPIG
TMEM189-UBE2V1ENSG00000124208.1611.381200.0000099999.999903.656602.90480K562PTBP1
TMEM189-UBE2V1ENSG00000124208.1649.997200.0000099999.999902.964601.31610K562RPS3A
TMEM189-UBE2V1ENSG00000124208.1622.637000.0000099999.999906.047904.57580K562SF3B1
TMEM189-UBE2V1ENSG00000124208.1612.988200.0000099999.999903.844702.12840K562TRIP6
TMEM189-UBE2V1ENSG00000124208.1614.416700.0000099999.999904.487702.95030K562UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TMEM189-UBE2V1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of TMEM189-UBE2V1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TMEM189-UBE2V1 is not avaliable on ENCORE database.