RBMXL1

General Information

Gene Name       : RBMXL1
Gene ID             : ENSG00000213516.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RBMXL1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RBMXL1ENSG00000213516.97.446.266.85ENCSR000AEF
HepG2RBMXL1ENSG00000213516.95.539.517.52ENCSR985KAT
K562RBMXL1ENSG00000213516.911.8214.6013.21ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RBMXL1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RBMXL1 RNA is bound by 5 proteins.  







eCLIP assay for RBMXL1 is not avaliable on ENCORE database.





5 proteins are bound to RBMXL1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr18944517989445267-3'-UTR,intron-Distal4.3628711.22023K562PUM2
chr18944603789446085-3'-UTR,intron-Distal5.176666.79809K562PABPC4
chr18945826489458328-5'-UTR,intron-Distal,intron-Proximal3.649438.16459K562DDX3X
chr18945826489458312-5'-UTR,intron-Distal,intron-Proximal3.020693.90007HepG2NCBP2
chr18945825089458268-intron-Distal,intron-Proximal3.695075.73990HepG2PRPF8
chr18945822289458250-intron-Distal,intron-Proximal3.788006.34662HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RBMXL1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RBMXL1 is not available on ENCORE database.

  • 79 RBPs can affect the levels of RBMXL1.  








The Knockdown/knockout RNA-Seq assay for RBMXL1 is not available on ENCORE database.





79 RBPs can affect the gene expression of RBMXL1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RBMXL1ENSG00000213516.5350.86270480.94230-0.455003.529202.77080HepG2AUH
RBMXL1ENSG00000213516.5243.98260486.87470-0.996809.784608.74660HepG2BOP1
RBMXL1ENSG00000213516.5290.35700475.52870-0.711704.236703.01700HepG2CCAR1
RBMXL1ENSG00000213516.5157.71770329.26560-1.0619011.4901010.32320HepG2CKAP4
RBMXL1ENSG00000213516.5255.01980446.97390-0.809606.102905.11610HepG2CPSF6
RBMXL1ENSG00000213516.5165.71520317.61170-0.938606.560305.00230HepG2YBX3
RBMXL1ENSG00000213516.5125.15810272.76250-1.123908.466107.34990HepG2DDX21
RBMXL1ENSG00000213516.5236.06390311.90480-0.401902.128601.50390HepG2DNAJC21
RBMXL1ENSG00000213516.5217.19640309.10130-0.509103.478502.76150HepG2DNAJC2
RBMXL1ENSG00000213516.5124.93690351.89080-1.4939013.6179012.37000HepG2EIF2S1
RBMXL1ENSG00000213516.5230.85580388.91740-0.752504.699403.86930HepG2EIF4A3
RBMXL1ENSG00000213516.5165.52560237.07190-0.518302.156501.45550HepG2FUBP3
RBMXL1ENSG00000213516.5249.80160368.41100-0.560502.976602.25260HepG2HNRNPK
RBMXL1ENSG00000213516.5218.20920483.52530-1.1479011.126209.96640HepG2HNRNPLL
RBMXL1ENSG00000213516.5285.90910382.63060-0.420402.547701.85270HepG2IGF2BP1
RBMXL1ENSG00000213516.5223.91860301.05550-0.427102.525301.54860HepG2KIF1C
RBMXL1ENSG00000213516.5240.50620359.81300-0.581203.110202.34660HepG2PABPC4
RBMXL1ENSG00000213516.5204.67130316.25120-0.627802.812801.76450HepG2PCBP2
RBMXL1ENSG00000213516.5174.34760310.32760-0.831806.812005.69660HepG2PPIL4
RBMXL1ENSG00000213516.5569.15910331.935600.777809.679208.77810HepG2PTBP1
RBMXL1ENSG00000213516.5565.03860422.787400.418302.749802.15490HepG2PUF60
RBMXL1ENSG00000213516.5421.69090335.451400.330002.058001.50820HepG2PUS1
RBMXL1ENSG00000213516.5273.80960359.45630-0.392601.939301.40160HepG2QKI
RBMXL1ENSG00000213516.5623.07950305.111401.030006.585205.52230HepG2RAVER1
RBMXL1ENSG00000213516.5246.87400418.61880-0.761906.198905.23310HepG2RPLP0
RBMXL1ENSG00000213516.5180.10800299.85540-0.735403.383502.33900HepG2RPS10
RBMXL1ENSG00000213516.5196.92730309.85560-0.653904.818504.00820HepG2SAFB2
RBMXL1ENSG00000213516.5294.67780464.89200-0.657804.075603.24980HepG2SF3A3
RBMXL1ENSG00000213516.5216.52490478.58880-1.1443011.7930010.42970HepG2SF3B1
RBMXL1ENSG00000213516.5239.75800345.55570-0.527303.237802.60490HepG2SF3B4
RBMXL1ENSG00000213516.5277.22310405.39730-0.548304.363903.51150HepG2SLBP
RBMXL1ENSG00000213516.5326.09670532.51600-0.707503.790202.87000HepG2SNRNP70
RBMXL1ENSG00000213516.5421.15150521.26730-0.307701.960701.51740HepG2SRFBP1
RBMXL1ENSG00000213516.5524.09380360.698400.538904.764204.18630HepG2SRSF1
RBMXL1ENSG00000213516.5205.61770286.51630-0.478702.266701.41110HepG2SUPT6H
RBMXL1ENSG00000213516.5164.37500338.13920-1.040609.572808.74040HepG2TIAL1
RBMXL1ENSG00000213516.5197.12080341.09610-0.791107.392306.54640HepG2TRIM56
RBMXL1ENSG00000213516.5190.44020394.82470-1.051902.287701.40180HepG2U2AF2
RBMXL1ENSG00000213516.591.30350178.91240-0.970504.569703.59140HepG2UCHL5
RBMXL1ENSG00000213516.5339.85780453.43810-0.416003.304402.72240HepG2ZNF622
RBMXL1ENSG00000213516.51071.612201633.03060-0.607807.210805.26310K562ABCF1
RBMXL1ENSG00000213516.5986.50130739.752000.415203.308002.59190K562AKAP8L
RBMXL1ENSG00000213516.5716.309501286.03930-0.844309.813308.81220K562AQR
RBMXL1ENSG00000213516.5580.22230740.65100-0.352203.086602.07600K562BCLAF1
RBMXL1ENSG00000213516.5644.43510976.94050-0.600204.512203.38730K562BOP1
RBMXL1ENSG00000213516.5558.974301038.81540-0.894108.766207.35390K562CPSF6
RBMXL1ENSG00000213516.5609.03340805.71790-0.403803.966002.49850K562DDX21
RBMXL1ENSG00000213516.5467.78970649.30340-0.473004.358102.68150K562DDX27
RBMXL1ENSG00000213516.5731.184901394.69140-0.9316023.9876022.25890K562DDX47
RBMXL1ENSG00000213516.5484.26500642.51150-0.407903.733602.30860K562EIF2S1
RBMXL1ENSG00000213516.5699.54230940.11790-0.426404.664303.76130K562EIF2S2
RBMXL1ENSG00000213516.5502.85100621.23030-0.305002.001201.31540K562EIF3G
RBMXL1ENSG00000213516.5350.65450611.17380-0.801508.547507.10340K562EIF4A3
RBMXL1ENSG00000213516.51121.768901609.31880-0.520705.161503.89610K562EIF4G2
RBMXL1ENSG00000213516.5923.487901173.79380-0.346002.636901.80900K562FIP1L1
RBMXL1ENSG00000213516.5804.311701056.87830-0.394002.775601.91990K562FMR1
RBMXL1ENSG00000213516.5606.18160895.75990-0.563404.646503.43180K562FTO
RBMXL1ENSG00000213516.5783.61290635.589400.301902.240101.68520K562FXR1
RBMXL1ENSG00000213516.5665.24010991.85090-0.576204.792903.75100K562GPKOW
RBMXL1ENSG00000213516.5846.561701252.77770-0.565406.457605.29530K562GRSF1
RBMXL1ENSG00000213516.5470.04150685.97100-0.545404.542803.79710K562HNRNPC
RBMXL1ENSG00000213516.51008.495601591.47990-0.658208.304606.93810K562HSPD1
RBMXL1ENSG00000213516.5587.11960846.81770-0.528403.102002.10660K562KRR1
RBMXL1ENSG00000213516.5657.45730968.14120-0.558304.347003.23200K562METAP2
RBMXL1ENSG00000213516.5792.04500977.80010-0.304002.988802.14950K562MTPAP
RBMXL1ENSG00000213516.5880.96370616.457200.515003.051402.11760K562NAA15
RBMXL1ENSG00000213516.5784.908101086.44940-0.469007.573306.42330K562NSUN2
RBMXL1ENSG00000213516.5530.477701048.52630-0.9830012.3591010.61060K562PCBP3
RBMXL1ENSG00000213516.5384.28080804.24090-1.0655017.0136015.11430K562POLR2G
RBMXL1ENSG00000213516.5997.339801332.42160-0.417903.627002.66870K562PPIG
RBMXL1ENSG00000213516.51392.62280750.799800.8912016.8557015.28160K562PTBP1
RBMXL1ENSG00000213516.51446.199301830.01890-0.339602.513301.59710K562PUM2
RBMXL1ENSG00000213516.5912.79820733.679200.315001.879601.41520K562PUS1
RBMXL1ENSG00000213516.5937.70950714.819900.391503.605002.94170K562RBM15
RBMXL1ENSG00000213516.5304.54220661.26940-1.1186010.384608.77530K562RPS19
RBMXL1ENSG00000213516.5394.47310573.55840-0.540003.281502.18230K562RPS3
RBMXL1ENSG00000213516.5935.98210716.643600.385103.017401.88710K562SAFB
RBMXL1ENSG00000213516.5568.397401072.01010-0.9153018.0399016.10270K562SF3A3
RBMXL1ENSG00000213516.5587.90360943.14740-0.681905.262903.89420K562SF3B1
RBMXL1ENSG00000213516.5438.94300628.63200-0.518203.091402.01650K562SUPV3L1
RBMXL1ENSG00000213516.5470.04130744.92260-0.664306.188605.09490K562TARDBP
RBMXL1ENSG00000213516.5556.17670718.55800-0.369602.609401.81650K562TIA1
RBMXL1ENSG00000213516.5393.37780591.56750-0.588604.063102.91300K562TIAL1
RBMXL1ENSG00000213516.51056.525301373.35290-0.378402.840301.43400K562TRIP6
RBMXL1ENSG00000213516.5407.83330662.38250-0.699707.851706.48760K562U2AF2
RBMXL1ENSG00000213516.5425.00060665.24490-0.646405.011303.59580K562UCHL5
RBMXL1ENSG00000213516.5627.109301151.98330-0.8773014.4284012.94090K562UPF1
RBMXL1ENSG00000213516.5839.818101201.79110-0.517002.784401.57800K562UTP3
RBMXL1ENSG00000213516.5776.72940985.71900-0.343802.754101.87820K562WDR3
RBMXL1ENSG00000213516.5587.632901025.01060-0.8027017.3469015.49110K562WDR43
RBMXL1ENSG00000213516.51166.277001448.91830-0.313102.290701.51730K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RBMXL1 is not available on ENCORE database.





1 RBPs can affect the splicing of RBMXL1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERBMXL1ENSG00000213516.5chr1-8945393489454034894451418944974989458267894586430.475000.000030.01933includedK562PPIL4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RBMXL1 is not avaliable on ENCORE database.