PPP1R7

General Information

Gene Name       : PPP1R7
Gene ID             : ENSG00000115685.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PPP1R7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PPP1R7ENSG00000115685.14105.5799.68102.62ENCSR000AEF
HepG2PPP1R7ENSG00000115685.1449.9078.1764.03ENCSR985KAT
K562PPP1R7ENSG00000115685.1444.7850.4547.62ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PPP1R7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PPP1R7 RNA is bound by 9 proteins.  







eCLIP assay for PPP1R7 is not avaliable on ENCORE database.





9 proteins are bound to PPP1R7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2242097219242097266+CDS,intron-Proximal4.5352610.38007K562UCHL5
chr2242097898242097964+CDS,intron-Proximal3.774106.80054K562GRWD1
chr2242097928242097969+CDS,intron-Proximal3.925599.16086K562UCHL5
chr2242097220242097278+CDS,intron-Proximal3.909627.65528K562ZNF622
chr2242099842242099911+CDS,intron-Proximal3.416067.44661K562YBX3
chr2242097898242097928+CDS,intron-Proximal3.296584.89070K562UCHL5
chr2242097898242097966+CDS,intron-Proximal3.485149.28206HepG2PPIG
chr2242098624242098649+CDS,intron-Proximal3.818785.57819K562UCHL5
chr2242098627242098662+CDS,intron-Proximal4.644365.44793K562ZNF622
chr2242092889242092974+CDS,intron-Distal,intron-Proximal3.428335.74981HepG2GRWD1
chr2242097897242097965+CDS,intron-Proximal4.6621710.62290K562ZNF622
chr2242092998242093023+CDS,intron-Distal,intron-Proximal4.220393.02457HepG2BCLAF1
chr2242092888242092985+CDS,intron-Distal,intron-Proximal5.9675814.36447K562UCHL5
chr2242092990242093022+CDS,intron-Distal,intron-Proximal5.395839.64872K562UCHL5
chr2242102699242102760+CDS,intron-Proximal3.313854.70209K562YBX3
chr2242102760242102808+CDS4.413104.95438K562YBX3
chr2242097898242097965+CDS,intron-Proximal3.811986.59473HepG2GRWD1
chr2242097220242097275+CDS,intron-Proximal3.259394.26492HepG2BCLAF1
chr2242096340242096451+intron-Distal3.467674.41411K562TARDBP
chr2242093069242093131+intron-Distal,intron-Proximal4.212083.97974HepG2RBFOX2
chr2242105879242105926+intron-Proximal4.721163.36105HepG2RBM22
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PPP1R7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PPP1R7 is not available on ENCORE database.

  • 50 RBPs can affect the levels of PPP1R7.  








The Knockdown/knockout RNA-Seq assay for PPP1R7 is not available on ENCORE database.





50 RBPs can affect the gene expression of PPP1R7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PPP1R7ENSG00000115685.102131.92230980.313801.1207016.3312015.14820HepG2AKAP1
PPP1R7ENSG00000115685.10633.61550447.818300.500603.123002.01760HepG2AKAP8
PPP1R7ENSG00000115685.101023.49890811.109600.335402.010301.33690HepG2ASCC1
PPP1R7ENSG00000115685.101296.47250770.615700.750408.692607.38360HepG2CIRBP
PPP1R7ENSG00000115685.10822.16410695.791600.240702.104401.36970HepG2DDX19B
PPP1R7ENSG00000115685.101272.49030939.028400.438303.206302.53930HepG2DDX3X
PPP1R7ENSG00000115685.10806.28320568.894800.503003.962702.76150HepG2DDX5
PPP1R7ENSG00000115685.10800.30850591.199600.436802.846901.91380HepG2EEF2
PPP1R7ENSG00000115685.10662.71980492.848500.427202.694101.59670HepG2EFTUD2
PPP1R7ENSG00000115685.101366.67800856.914400.673406.189205.23750HepG2EIF4A3
PPP1R7ENSG00000115685.101459.824001255.399000.217502.110801.57110HepG2ETF1
PPP1R7ENSG00000115685.10471.11490724.51290-0.620904.713203.38160HepG2GNB2L1
PPP1R7ENSG00000115685.10588.95810718.24710-0.286302.295301.39920HepG2HDGF
PPP1R7ENSG00000115685.10825.89700663.758700.315201.901901.31520HepG2HNRNPC
PPP1R7ENSG00000115685.10664.11210813.95220-0.293502.447801.77070HepG2HNRNPF
PPP1R7ENSG00000115685.10893.70520699.958200.352402.013601.46770HepG2HNRNPLL
PPP1R7ENSG00000115685.101436.62790815.279400.8172010.177708.97060HepG2IGF2BP2
PPP1R7ENSG00000115685.101081.15040865.023100.321701.869001.32510HepG2MAGOH
PPP1R7ENSG00000115685.10752.87330579.435200.377702.636101.84660HepG2MSI2
PPP1R7ENSG00000115685.10660.64420463.822300.510202.173701.40170HepG2PABPC1
PPP1R7ENSG00000115685.101013.75690869.707500.221001.778401.32020HepG2PTBP1
PPP1R7ENSG00000115685.10977.103801281.32720-0.391106.176305.36300HepG2PUM1
PPP1R7ENSG00000115685.10999.38980766.308400.383004.682303.92170HepG2PUS1
PPP1R7ENSG00000115685.10783.033801049.28850-0.422304.172203.56960HepG2RBM22
PPP1R7ENSG00000115685.101097.00090876.817200.323102.245101.62100HepG2RPLP0
PPP1R7ENSG00000115685.10453.21210692.83990-0.612305.064304.13270HepG2SF3B1
PPP1R7ENSG00000115685.10915.197501157.37860-0.338704.173803.33700HepG2SLBP
PPP1R7ENSG00000115685.101276.52540945.091300.433606.147005.51030HepG2SRSF1
PPP1R7ENSG00000115685.10765.449701191.78050-0.6387011.1764010.03220HepG2SRSF5
PPP1R7ENSG00000115685.10608.15060799.67910-0.395003.874203.07070HepG2SRSF7
PPP1R7ENSG00000115685.10591.06740768.89950-0.379503.800503.17540HepG2SRSF9
PPP1R7ENSG00000115685.101230.088001029.009400.257402.698902.19040HepG2SSB
PPP1R7ENSG00000115685.10734.30130477.190900.621702.351401.36770HepG2TBRG4
PPP1R7ENSG00000115685.10795.93180640.664800.313002.261301.79980HepG2TIAL1
PPP1R7ENSG00000115685.10831.57660612.421700.441203.058902.39990HepG2U2AF1
PPP1R7ENSG00000115685.10666.81390544.074400.293402.387601.75810HepG2ZC3H8
PPP1R7ENSG00000115685.101038.97250743.719500.482207.751706.95660HepG2ZNF622
PPP1R7ENSG00000115685.10741.893101187.61580-0.678807.143506.27090K562AQR
PPP1R7ENSG00000115685.10199.56100302.52580-0.600203.356402.17130K562CCAR1
PPP1R7ENSG00000115685.101051.73860858.659100.292502.903002.23560K562DDX47
PPP1R7ENSG00000115685.10693.88210533.889500.378003.181202.53890K562FXR1
PPP1R7ENSG00000115685.10739.02220467.021500.662005.314503.97360K562HNRNPM
PPP1R7ENSG00000115685.10636.20650858.54600-0.432404.294903.17330K562HNRNPU
PPP1R7ENSG00000115685.10975.95430769.771100.342302.260101.53680K562HSPD1
PPP1R7ENSG00000115685.10699.47440525.346900.412902.510301.79560K562PRPF8
PPP1R7ENSG00000115685.10429.83730684.11340-0.670406.517105.15620K562RBM22
PPP1R7ENSG00000115685.10913.90720535.088500.772206.994605.68160K562RPS19
PPP1R7ENSG00000115685.10380.44100489.77350-0.364402.280701.50680K562SF3B4
PPP1R7ENSG00000115685.10637.47460762.20820-0.257801.908701.30430K562UPF1
PPP1R7ENSG00000115685.10608.42160822.91290-0.435703.788601.81690K562UPF2
PPP1R7ENSG00000115685.10813.18870678.246900.261702.285101.50940K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PPP1R7 is not available on ENCORE database.





21 RBPs can affect the splicing of PPP1R7 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPPP1R7ENSG00000115685.10chr2+2420928902420930192420889902420891232420972212420972770.073000.001370.09397includedHepG2G3BP1
SEPPP1R7ENSG00000115685.10chr2+2420928902420930192420898942420899622420972212420972770.101000.000040.00157includedK562SRSF1
SEPPP1R7ENSG00000115685.10chr2+242092890242093019242088990242089123242097221242097277-0.131000.000840.02719excludedK562AKAP8L
SEPPP1R7ENSG00000115685.10chr2+242092890242093019242089894242089962242097221242097277-0.138000.000070.01363excludedHepG2HNRNPM
SEPPP1R7ENSG00000115685.10chr2+2420928902420930192420898942420899622420972212420972770.109000.000070.02939includedK562PUM1
SEPPP1R7ENSG00000115685.10chr2+242092890242093019242089894242089962242097221242097277-0.156000.000030.01280excludedK562PCBP1
SEPPP1R7ENSG00000115685.10chr2+2420928902420930192420898942420899622420972212420972770.069000.000360.00516includedK562AQR
SEPPP1R7ENSG00000115685.10chr2+242099746242099909242097898242097964242102699242102816-0.165000.000000.00000excludedHepG2SRSF7
SEPPP1R7ENSG00000115685.10chr2+2420928902420930192420898942420899622420972212420972770.083000.000220.01479includedHepG2SFPQ
SEPPP1R7ENSG00000115685.10chr2+242092890242093019242089894242089962242097221242097277-0.101000.000170.07987excludedHepG2UPF1
SEPPP1R7ENSG00000115685.10chr2+242092890242093019242089894242089962242097221242097277-0.134000.000740.09340excludedHepG2HNRNPA1
SEPPP1R7ENSG00000115685.10chr2+2420928902420930192420898942420899622420972212420972770.171000.000390.01045includedK562U2AF1
SEPPP1R7ENSG00000115685.10chr2+242092890242093019242089894242089962242097221242097277-0.129000.000000.00003excludedHepG2PCBP1
SEPPP1R7ENSG00000115685.10chr2+242092890242093019242089894242089962242097221242097277-0.119000.000750.02770excludedK562UTP18
SEPPP1R7ENSG00000115685.10chr2+2420928972420930192420898812420899622420972212420972770.210000.000960.01932includedK562U2AF2
SEPPP1R7ENSG00000115685.10chr2+242092890242093019242089894242089962242097221242097277-0.117000.000670.02014excludedK562RBM15
SEPPP1R7ENSG00000115685.10chr2+242092897242093019242089881242089962242097221242097277-0.142000.003600.07276excludedK562AGGF1
SEPPP1R7ENSG00000115685.10chr2+242092890242093019242089894242089962242097221242097277-0.157000.000010.00091excludedK562HNRNPK
SEPPP1R7ENSG00000115685.10chr2+242092890242093019242089894242089962242097221242097277-0.094000.000360.07272excludedHepG2XRCC6
SEPPP1R7ENSG00000115685.10chr2+242092890242093019242089894242089962242097221242097277-0.119000.000010.00116excludedHepG2SRSF9
A5SSPPP1R7ENSG00000115685.10chr2+242097898242097964242097898242097946242098627242098758-0.083000.000720.08129shorterK562RBM22
MXEPPP1R7ENSG00000115685.10chr2+242097898242097964242099746242099909242097221242097277242102699242102816-0.124000.003010.061042includedK562TARDBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PPP1R7 is not avaliable on ENCORE database.