MRPL30

General Information

Gene Name       : MRPL30
Gene ID             : ENSG00000185414.19
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MRPL30)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MRPL30ENSG00000185414.1959.8743.1151.49ENCSR000AEF
HepG2MRPL30ENSG00000185414.1938.7767.3853.08ENCSR985KAT
K562MRPL30ENSG00000185414.1978.0182.8680.44ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MRPL30 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MRPL30 RNA is bound by 14 proteins.  







eCLIP assay for MRPL30 is not avaliable on ENCORE database.





14 proteins are bound to MRPL30 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr29981375199813766+3'-UTR,intron-Distal3.148178.87920K562YBX3
chr29981245699812527+3'-UTR,intron-Distal,intron-Proximal6.1540429.67392HepG2UPF1
chr29981232399812346+3'-UTR,intron-Distal,intron-Proximal3.584376.67761K562UPF1
chr29981361199813626+3'-UTR,intron-Distal4.7772815.52312K562UPF1
chr29981392199813979+3'-UTR,intron-Distal3.312614.01563K562LIN28B
chr29981234699812377+3'-UTR,intron-Distal,intron-Proximal4.4773812.41920K562UPF1
chr29981371899813751+3'-UTR,intron-Distal3.4942711.95636K562YBX3
chr29981238199812437+3'-UTR,intron-Distal,intron-Proximal5.6724915.43167K562AKAP1
chr29981376199813817+3'-UTR,intron-Distal3.225048.85201K562FAM120A
chr29981352199813538+3'-UTR,intron-Distal4.167937.13820K562UPF1
chr29981276899812851+3'-UTR,intron-Distal,intron-Proximal4.8039424.07611K562UPF1
chr29981299199813044+3'-UTR,intron-Distal,intron-Proximal4.1800314.85633K562AKAP1
chr29981263799812689+3'-UTR,intron-Distal3.6450313.42347K562UPF1
chr29981381099813865+3'-UTR,intron-Distal5.8192510.71230HepG2SUB1
chr29981278099812884+3'-UTR,intron-Distal,intron-Proximal5.1625422.63930HepG2UPF1
chr29981362699813674+3'-UTR,intron-Distal4.6556517.70314K562UPF1
chr29981227299812302+3'-UTR,intron-Proximal3.8441917.66615K562UPF1
chr29981225599812272+3'-UTR,intron-Proximal3.9407217.36540K562UPF1
chr29980263999802671+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.1451515.56247K562DDX3X
chr29981374599813812+3'-UTR,intron-Distal5.2164335.74499K562UPF1
chr29981225499812321+3'-UTR,intron-Distal,intron-Proximal4.961135.97422HepG2AKAP1
chr29981263799812685+3'-UTR,intron-Distal3.485885.00403K562IGF2BP1
chr29981299599813070+3'-UTR,intron-Distal,intron-Proximal4.8776425.28982K562UPF1
chr29981238899812456+3'-UTR,intron-Distal6.6358533.27376HepG2UPF1
chr29981288899812929+3'-UTR,intron-Distal,intron-Proximal5.1666214.07248K562UPF1
chr29981299199813038+3'-UTR,intron-Distal,intron-Proximal5.5913810.01142HepG2UPF1
chr29981371499813745+3'-UTR,intron-Distal4.4976716.54613K562UPF1
chr29981294399812993+3'-UTR,intron-Distal,intron-Proximal4.2368520.23985K562UPF1
chr29981294099812989+3'-UTR,intron-Distal,intron-Proximal4.0502619.94558K562AKAP1
chr29981247399812524+3'-UTR,intron-Distal,intron-Proximal4.1487917.37748K562AKAP1
chr29981248099812556+3'-UTR,intron-Distal,intron-Proximal5.2993123.55935K562UPF1
chr29981295399812991+3'-UTR,intron-Distal,intron-Proximal4.691539.06961HepG2UPF1
chr29981381299813862+3'-UTR,intron-Distal4.4069516.22320K562UPF1
chr29981224599812310+3'-UTR,intron-Proximal4.4696024.28812HepG2UPF1
chr29981263899812697+3'-UTR,intron-Distal3.794188.96355K562FAM120A
chr29981308699813160+3'-UTR,intron-Distal5.3955932.67532K562UPF1
chr29979768599797758+5'-UTR,intron-Distal,intron-Proximal4.5385411.95020HepG2PRPF8
chr29979764999797713+5'-UTR,intron-Distal,intron-Proximal3.7996413.18532K562DDX3X
chr29981133799811360+CDS4.241303.89826HepG2BCLAF1
chr29981133299811361+CDS,intron-Proximal3.002303.84692K562UCHL5
chr29980267999802747+CDS,intron-Distal,intron-Proximal4.891224.02817HepG2PRPF8
chr29981157899811617+CDS,intron-Proximal3.673844.17155HepG2BCLAF1
chr29977507999775139+intron-Distal4.439563.16986HepG2QKI
chr29977395099774016+intron-Distal4.082983.63454HepG2SUGP2
chr29977425899774335+intron-Distal3.127733.10883HepG2SUGP2
chr29980474399804889+intron-Distal,intron-Proximal3.466224.13575K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MRPL30 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MRPL30 is not available on ENCORE database.

  • 59 RBPs can affect the levels of MRPL30.  








The Knockdown/knockout RNA-Seq assay for MRPL30 is not available on ENCORE database.





59 RBPs can affect the gene expression of MRPL30 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MRPL30ENSG00000185414.1548.30350287.38380-2.5728028.2172026.64010HepG2BOP1
MRPL30ENSG00000185414.1529.3103079.87380-1.446304.690003.10330HepG2BUD13
MRPL30ENSG00000185414.1524.2642087.79850-1.855406.683005.03070HepG2CPSF7
MRPL30ENSG00000185414.15165.5514059.624301.473202.822601.41890HepG2DDX28
MRPL30ENSG00000185414.15245.8521065.600001.905906.204204.38240HepG2FKBP4
MRPL30ENSG00000185414.15114.0943046.478201.295504.866403.83870HepG2FUBP3
MRPL30ENSG00000185414.1543.2878094.31820-1.123602.081101.30810HepG2GEMIN5
MRPL30ENSG00000185414.15308.21430102.371201.590003.304502.64650HepG2HNRNPU
MRPL30ENSG00000185414.1560.64450113.94230-0.909902.369101.42480HepG2KIF1C
MRPL30ENSG00000273155.10.000006.91420-99999.999991.851701.33010HepG2MATR3
MRPL30ENSG00000185414.1546.36570110.85600-1.257602.262301.31050HepG2METAP2
MRPL30ENSG00000185414.1530.1248073.15750-1.280103.522102.14930HepG2NAA15
MRPL30ENSG00000185414.15100.78980149.81600-0.571802.187601.63770HepG2PCBP1
MRPL30ENSG00000185414.15285.70850199.168100.520502.958602.34560HepG2PUF60
MRPL30ENSG00000185414.1540.97370126.92890-1.631204.806704.03630HepG2PUS1
MRPL30ENSG00000185414.1562.09120149.83920-1.271006.219805.24620HepG2RBM25
MRPL30ENSG00000185414.15333.67860116.927801.512705.053903.01240HepG2RBM47
MRPL30ENSG00000185414.15288.34090158.005700.867705.703504.85840HepG2RECQL
MRPL30ENSG00000185414.1539.08090103.11550-1.399702.334301.76450HepG2RPS19
MRPL30ENSG00000185414.15103.0813029.902501.785305.224601.66240HepG2SDAD1
MRPL30ENSG00000185414.1539.26550103.44530-1.397502.853601.89910HepG2SERBP1
MRPL30ENSG00000185414.15264.22880158.715200.735204.397303.67820HepG2SF3B4
MRPL30ENSG00000185414.15393.68970165.662401.248708.738308.00450HepG2SRSF1
MRPL30ENSG00000185414.1520.1357072.69550-1.852105.452004.15650HepG2SUPT6H
MRPL30ENSG00000185414.15116.97400278.20280-1.249903.151702.38270HepG2TARDBP
MRPL30ENSG00000185414.1568.52770194.62420-1.505906.824805.35740HepG2TUFM
MRPL30ENSG00000273155.10.000008.56920-99999.999992.284601.68960K562AKAP8L
MRPL30ENSG00000185414.1552.87950121.80860-1.203806.017703.03760K562ASCC1
MRPL30ENSG00000185414.15250.34560134.239500.899006.293204.84490K562ATP5C1
MRPL30ENSG00000185414.15138.02940217.14460-0.653702.805301.92570K562BOP1
MRPL30ENSG00000185414.15204.7139046.327602.1436010.928308.07340K562CEBPZ
MRPL30ENSG00000185414.15304.86210618.02720-1.019507.032405.28340K562CNOT7
MRPL30ENSG00000185414.15210.72470340.11710-0.690704.962703.45220K562CPEB4
MRPL30ENSG00000185414.1589.71910230.89330-1.363706.576005.36260K562CPSF6
MRPL30ENSG00000185414.1518.0689062.26040-1.784802.349401.38980K562CSTF2
MRPL30ENSG00000185414.15549.90760337.593300.703806.804505.29410K562CELF1
MRPL30ENSG00000185414.1568.79830133.82690-0.959904.180301.94400K562DDX24
MRPL30ENSG00000185414.1570.40070138.71370-0.978404.980603.33050K562EIF2S1
MRPL30ENSG00000185414.1552.94880131.94970-1.317302.294101.54490K562EIF4A3
MRPL30ENSG00000185414.1548.21660118.82010-1.301206.707004.78250K562EIF4B
MRPL30ENSG00000185414.1543.99850115.17350-1.388303.889602.32200K562EWSR1
MRPL30ENSG00000185414.1531.01410124.47940-2.0049010.763707.35820K562FUBP3
MRPL30ENSG00000185414.15902.16340234.871901.941403.256602.47890K562G3BP2
MRPL30ENSG00000185414.15160.5060091.143600.816303.929302.57420K562GLRX3
MRPL30ENSG00000185414.15104.59050220.45120-1.075706.540905.32390K562GPKOW
MRPL30ENSG00000185414.15103.61220318.05790-1.6181016.6130013.95590K562HNRNPL
MRPL30ENSG00000273155.10.000009.09310-99999.999992.479001.70290K562KIF1C
MRPL30ENSG00000185414.15102.10140215.18290-1.075606.741505.34170K562METAP2
MRPL30ENSG00000185414.1519.09150131.77090-2.7870017.5612014.75180K562NCBP2
MRPL30ENSG00000185414.15285.07990593.74440-1.058508.310006.17780K562PABPC1
MRPL30ENSG00000185414.15121.01970470.40320-1.958702.674501.70430K562PABPN1
MRPL30ENSG00000185414.1541.269206.618302.640405.388002.55770K562RBFOX2
MRPL30ENSG00000273155.10.0000010.42090-99999.999993.468301.66360K562RBM17
MRPL30ENSG00000185414.15101.02960223.21790-1.143702.750801.42440K562RBM25
MRPL30ENSG00000185414.1550.2967094.33840-0.907402.231701.34090K562RPS3
MRPL30ENSG00000185414.1518.6127046.16200-1.310402.382601.38190K562SAFB
MRPL30ENSG00000185414.15277.28000562.97610-1.021706.873304.36260K562SBDS
MRPL30ENSG00000185414.1572.62400430.42650-2.567204.462702.82180K562SF1
MRPL30ENSG00000185414.1532.85400525.07460-3.998408.570705.82740K562SFPQ
MRPL30ENSG00000185414.1529.9029091.10320-1.607205.533703.94630K562SRSF4
MRPL30ENSG00000185414.1520.72770139.57310-2.751402.238201.31390K562SRSF5
MRPL30ENSG00000185414.15581.69770235.461801.304706.210105.01620K562U2AF2
MRPL30ENSG00000185414.15148.60250337.78110-1.184603.086801.59970K562UBE2L3
MRPL30ENSG00000185414.15208.50670100.453501.053507.771706.42110K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MRPL30 is not available on ENCORE database.





4 RBPs can affect the splicing of MRPL30 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMRPL30ENSG00000185414.15chr2+998046399980472099797648997977129981121399811552-0.081000.000000.00000excludedK562PUS1
SEMRPL30ENSG00000185414.15chr2+998026399980271799797541997977129981121399811360-0.081000.001210.03557excludedHepG2SF3A3
SEMRPL30ENSG00000185414.15chr2+998026399980271799797541997977129981121399811360-0.060000.000010.00061excludedK562HNRNPU
SEMRPL30ENSG00000185414.15chr2+998046399980472099797648997977129981121399811552-0.059000.000000.00015excludedK562RBM15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MRPL30 is not avaliable on ENCORE database.