GOLPH3L

General Information

Gene Name       : GOLPH3L
Gene ID             : ENSG00000143457.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GOLPH3L)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GOLPH3LENSG00000143457.1018.7718.5118.64ENCSR000AEF
HepG2GOLPH3LENSG00000143457.109.2813.4111.34ENCSR985KAT
K562GOLPH3LENSG00000143457.1019.3919.9719.68ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GOLPH3L is not avaliable on ENCORE database.



Proteins bound to RNA
  • GOLPH3L RNA is bound by 6 proteins.  







eCLIP assay for GOLPH3L is not avaliable on ENCORE database.





6 proteins are bound to GOLPH3L RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1150620484150620557-3'-UTR,intron-Distal3.293703.55461K562UPF1
chr1150667151150667319-5'-UTR,CDS,intron-Distal3.952333.22974K562TRA2A
chr1150667120150667312-CDS,intron-Distal,intron-Proximal3.3797810.70099K562UCHL5
chr1150667121150667219-CDS,intron-Distal,intron-Proximal4.103293.56019HepG2GRWD1
chr1150636155150636235-CDS,intron-Distal3.741325.42720K562UCHL5
chr1150667114150667171-CDS,intron-Distal,intron-Proximal3.212794.37145K562GRWD1
chr1150667156150667234-CDS,intron-Distal4.073673.79199HepG2PPIG
chr1150653929150654014-intron-Distal5.351628.45817HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GOLPH3L is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GOLPH3L is not available on ENCORE database.

  • 78 RBPs can affect the levels of GOLPH3L.  








The Knockdown/knockout RNA-Seq assay for GOLPH3L is not available on ENCORE database.





78 RBPs can affect the gene expression of GOLPH3L :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GOLPH3LENSG00000143457.6940.58310565.679600.733506.022305.27190HepG2AKAP1
GOLPH3LENSG00000143457.6232.94300385.25740-0.725803.700302.61810HepG2BCCIP
GOLPH3LENSG00000143457.6321.85000544.97710-0.759806.643505.76330HepG2BOP1
GOLPH3LENSG00000143457.6350.42420560.51920-0.677707.572806.60730HepG2CELF1
GOLPH3LENSG00000143457.6441.82920602.77490-0.448104.808703.87140HepG2DAZAP1
GOLPH3LENSG00000143457.6237.81800378.77640-0.671503.275202.44420HepG2DDX55
GOLPH3LENSG00000143457.6339.07190477.71590-0.494603.020901.96950HepG2DDX5
GOLPH3LENSG00000143457.6289.41420465.52740-0.685704.166803.42040HepG2DDX6
GOLPH3LENSG00000143457.6304.64710390.13240-0.356802.015001.40550HepG2DNAJC21
GOLPH3LENSG00000143457.6272.31440447.45600-0.716504.816604.04580HepG2EIF2S1
GOLPH3LENSG00000143457.6252.72500383.73500-0.602504.234002.79790HepG2EIF2S2
GOLPH3LENSG00000143457.6230.02950481.48710-1.065707.616706.50530HepG2EIF4B
GOLPH3LENSG00000143457.6274.91500594.60620-1.1129018.2526016.49660HepG2EIF4G1
GOLPH3LENSG00000143457.6377.81900510.87290-0.435302.084401.41190HepG2FIP1L1
GOLPH3LENSG00000143457.6294.57070462.83160-0.651904.195903.38510HepG2G3BP1
GOLPH3LENSG00000143457.6350.46330491.42230-0.487702.801001.90410HepG2G3BP2
GOLPH3LENSG00000143457.6282.17180438.11370-0.634704.201803.36010HepG2HNRNPC
GOLPH3LENSG00000143457.6214.12510468.77900-1.1305010.965209.65610HepG2HNRNPK
GOLPH3LENSG00000143457.6279.88050549.10580-0.9723015.0135013.55670HepG2HNRNPL
GOLPH3LENSG00000143457.6311.94920470.43990-0.592703.752102.97610HepG2IGF2BP2
GOLPH3LENSG00000143457.6363.88110444.55850-0.288901.933601.30680HepG2ILF2
GOLPH3LENSG00000143457.6336.81000473.21640-0.490602.281001.38340HepG2KHSRP
GOLPH3LENSG00000143457.6263.37010391.04950-0.570303.367102.02580HepG2LIN28B
GOLPH3LENSG00000143457.6275.53480501.93890-0.865306.411405.48340HepG2MATR3
GOLPH3LENSG00000143457.6227.25380336.74570-0.567403.220401.69550HepG2NIP7
GOLPH3LENSG00000143457.6381.40850597.70610-0.648106.935605.73540HepG2NOL12
GOLPH3LENSG00000143457.6199.70950347.75650-0.800203.275702.07700HepG2NONO
GOLPH3LENSG00000143457.6341.21170217.953900.646502.633301.77200HepG2PABPC1
GOLPH3LENSG00000143457.6289.68650430.78260-0.572504.759603.68280HepG2PARN
GOLPH3LENSG00000143457.6540.96630439.536700.299501.940501.41760HepG2PCBP1
GOLPH3LENSG00000143457.6301.76650388.17750-0.363302.101901.45220HepG2PPIL4
GOLPH3LENSG00000143457.6379.55130570.54080-0.588004.931404.16370HepG2PUF60
GOLPH3LENSG00000143457.6414.16440605.62850-0.548206.760205.91810HepG2PUM1
GOLPH3LENSG00000143457.6385.80270605.20210-0.649606.533305.51830HepG2PUM2
GOLPH3LENSG00000143457.6477.15040364.846900.387102.923802.29490HepG2PUS1
GOLPH3LENSG00000143457.6351.57550484.39160-0.462303.234402.56670HepG2QKI
GOLPH3LENSG00000143457.6291.84490427.44060-0.550501.995301.38680HepG2RAVER1
GOLPH3LENSG00000143457.6344.61580520.50040-0.594905.129104.00550HepG2RBM15
GOLPH3LENSG00000143457.6310.32590439.60560-0.502403.302402.57120HepG2RBM25
GOLPH3LENSG00000143457.6294.48430455.78150-0.630204.654903.80000HepG2RPLP0
GOLPH3LENSG00000143457.6286.67050419.72970-0.550102.496201.59730HepG2RPS10
GOLPH3LENSG00000143457.6197.53450274.68370-0.475702.161801.61180HepG2RPS19
GOLPH3LENSG00000143457.6243.24770422.77700-0.797505.789504.22240HepG2RPS5
GOLPH3LENSG00000143457.6386.62300547.00680-0.500605.030604.12930HepG2SLBP
GOLPH3LENSG00000143457.6326.64320451.97340-0.468503.868303.12870HepG2SMN1
GOLPH3LENSG00000143457.6638.52870486.027800.393603.099602.60670HepG2SRSF1
GOLPH3LENSG00000143457.6374.16080576.44010-0.623503.758502.57310HepG2SRSF3
GOLPH3LENSG00000143457.6317.05880563.29510-0.8291010.890209.76050HepG2SRSF5
GOLPH3LENSG00000143457.6329.85560415.66940-0.333602.049301.44020HepG2SRSF7
GOLPH3LENSG00000143457.6243.76560395.40100-0.697806.589205.80260HepG2SRSF9
GOLPH3LENSG00000143457.6490.37260640.64810-0.385703.315702.64740HepG2SUCLG1
GOLPH3LENSG00000143457.6358.96410527.53980-0.555403.785402.95290HepG2TARDBP
GOLPH3LENSG00000143457.6245.20830422.87190-0.786207.100806.36720HepG2TIAL1
GOLPH3LENSG00000143457.6318.51790426.67620-0.421803.115202.52490HepG2TRIM56
GOLPH3LENSG00000143457.6334.79040557.35220-0.735307.036505.53730HepG2TUFM
GOLPH3LENSG00000143457.6379.07990589.92090-0.638004.104803.07520HepG2UBE2L3
GOLPH3LENSG00000143457.6108.26500222.76800-1.041006.092004.95620HepG2UCHL5
GOLPH3LENSG00000143457.6328.03550443.35920-0.434603.082901.98410HepG2UTP18
GOLPH3LENSG00000143457.6357.30800474.39120-0.408903.326602.74340HepG2ZNF622
GOLPH3LENSG00000143457.61134.283401453.88130-0.358103.110501.79230K562APOBEC3C
GOLPH3LENSG00000143457.6394.28510568.29550-0.527404.077702.76330K562CSTF2
GOLPH3LENSG00000143457.61133.099901427.37240-0.333104.101003.32860K562DDX47
GOLPH3LENSG00000143457.61741.370001459.208400.254902.556401.71930K562DKC1
GOLPH3LENSG00000143457.6338.88830485.64240-0.519102.199601.31570K562EIF3A
GOLPH3LENSG00000143457.6389.40430711.46280-0.8695012.4040010.68980K562EIF3G
GOLPH3LENSG00000143457.61357.287501647.70800-0.279702.878401.92170K562EIF4G2
GOLPH3LENSG00000143457.6595.39040932.61250-0.647409.128108.10310K562FXR1
GOLPH3LENSG00000143457.6732.69790951.08920-0.376403.600002.30430K562GLRX3
GOLPH3LENSG00000143457.61291.524401041.482100.310302.275601.55490K562GPKOW
GOLPH3LENSG00000143457.6620.18780764.30360-0.301401.838701.34030K562HNRNPC
GOLPH3LENSG00000143457.61803.649601318.295400.452104.390503.39520K562HSPD1
GOLPH3LENSG00000143457.6912.442001214.64100-0.412703.926402.91730K562MAGOH
GOLPH3LENSG00000143457.6878.317101212.23230-0.464904.969903.69130K562MATR3
GOLPH3LENSG00000143457.6900.375601180.07250-0.390303.727502.96740K562PTBP1
GOLPH3LENSG00000143457.61616.426301912.35030-0.242502.425901.43160K562PUM1
GOLPH3LENSG00000143457.61588.643301873.56160-0.238002.408901.51160K562PUM2
GOLPH3LENSG00000143457.6657.370501131.74790-0.7838010.503808.70670K562RBM22
GOLPH3LENSG00000143457.6770.402701190.93700-0.628406.637004.85970K562NELFE
GOLPH3LENSG00000143457.6922.316001156.82360-0.326802.616501.92690K562SRSF1
GOLPH3LENSG00000143457.6831.559201170.86910-0.493704.411103.51140K562TARDBP
GOLPH3LENSG00000143457.61231.25510941.138900.387602.526901.48800K562U2AF1
GOLPH3LENSG00000143457.61327.95590971.915600.450205.268504.16610K562U2AF2
GOLPH3LENSG00000143457.61418.864001178.037700.268302.999902.25180K562UPF1
GOLPH3LENSG00000143457.6780.016901048.22390-0.426405.850804.66930K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GOLPH3L is not available on ENCORE database.





10 RBPs can affect the splicing of GOLPH3L :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGOLPH3LENSG00000143457.6chr1-150634289150634404150618700150621224150636107150636239-0.117000.000700.01568excludedK562SF3B4
SEGOLPH3LENSG00000143457.6chr1-1506665831506666491506361071506362391506671311506673260.114000.001690.05494includedK562PRPF8
SEGOLPH3LENSG00000143457.6chr1-150636107150636239150634289150634404150667131150667326-0.123000.005030.05335excludedHepG2U2AF2
SEGOLPH3LENSG00000143457.6chr1-1506216061506217031506206861506212241506342891506344040.056000.000050.00097includedK562AQR
SEGOLPH3LENSG00000143457.6chr1-150634289150634404150618700150621224150636107150636239-0.069000.001730.01934excludedK562AQR
SEGOLPH3LENSG00000143457.6chr1-150634289150634404150618700150621224150636107150636239-0.051000.009110.09799excludedK562PUS1
SEGOLPH3LENSG00000143457.6chr1-150636107150636239150634289150634404150667131150667326-0.117000.001410.07538excludedHepG2FTO
SEGOLPH3LENSG00000143457.6chr1-150636107150636239150620912150621224150667131150667326-0.068000.000620.07791excludedK562LARP4
SEGOLPH3LENSG00000143457.6chr1-1506216061506217031506206861506212241506342891506344040.087000.000010.00062includedHepG2SF3A3
SEGOLPH3LENSG00000143457.6chr1-150636107150636239150634289150634404150667131150667326-0.145000.000080.00225excludedK562U2AF2
SEGOLPH3LENSG00000143457.6chr1-150634289150634404150620686150621224150636107150636239-0.083000.003010.09141excludedK562PTBP1
A3SSGOLPH3LENSG00000143457.6chr1-1506342891506344611506342891506344041506361071506362390.093000.000010.00007longerK562AQR
MXEGOLPH3LENSG00000143457.6chr1-150636107150636239150667131150667326150618700150621224150669467150669500-0.065000.003220.050032includedK562PUS1
MXEGOLPH3LENSG00000143457.6chr1-150634289150634404150636107150636239150618700150621224150667131150667326-0.369000.000000.000862includedHepG2DROSHA
MXEGOLPH3LENSG00000143457.6chr1-150636107150636239150667131150667326150618700150621224150669467150669500-0.058000.000420.009932includedK562SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GOLPH3L is not avaliable on ENCORE database.