DHX38

General Information

Gene Name       : DHX38
Gene ID             : ENSG00000140829.11
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: DHX38)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DHX38ENSG00000140829.1124.6427.4126.02ENCSR000AEF
HepG2DHX38ENSG00000140829.1196.6451.4974.06ENCSR985KAT
K562DHX38ENSG00000140829.1132.7627.4430.10ENCSR000AEO

Assays

1 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 4202ENCSR678OKJDHX38HepG2ReleasedENCAB630HFEENCSR038SNS  






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
DHX384202HepG2ENCSR678OKJENCSR038SNSENCAB630HFEA300-858A1ReleasedENCODE4


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
PRP16ENCAB630HFEA300-858A1Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
DHX38K562CRISPRBGKcLV21-19,BGKcLV21-20BGKcLV21-1,BGKcLV21-2NotSatisfiedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
PRP16Product_ID: A300-858A
Lot_ID: 1
Source: Thermo Fisher
Target Name: PRP16-human		 Bethyl_A300-858A_1_PRP16.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the PRP16 specific antibody, A300-858A. Lanes 1 and 3 are 2.5% of five million whole cell lysate input. Lanes 2 and 4 are 50% of IP enrichment from five million whole cell lysate using normal IgG antibody and the PRP16-specific antibody, A300-858A. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.








RNA Targets

  • eCLIP assay for DHX38 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DHX38 RNA is bound by 27 proteins.  







eCLIP assay for DHX38 is not avaliable on ENCORE database.





27 proteins are bound to DHX38 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr167213003972130131+3'-UTR,5'-UTR,CDS3.7478211.14477K562ZNF622
chr167214485472144942+3'-UTR,CDS,intron-Distal,intron-Proximal3.979257.68275HepG2PABPN1
chr167214497272145017+3'-UTR,CDS,intron-Distal,intron-Proximal5.476924.65563K562AQR
chr167214490872144977+3'-UTR,CDS,intron-Distal,intron-Proximal3.061644.81881HepG2BUD13
chr167214630872146334+3'-UTR,CDS,intron-Distal,intron-Proximal3.268285.30514HepG2BUD13
chr167214490072144973+3'-UTR,CDS,intron-Distal,intron-Proximal3.6768915.00826HepG2PPIG
chr167214336972143411+3'-UTR,CDS,intron-Distal,intron-Proximal4.153348.22830HepG2PABPN1
chr167213003872130089+3'-UTR,5'-UTR,CDS4.5636210.41018HepG2GRWD1
chr167213003572130077+3'-UTR,5'-UTR,CDS,intron-Proximal3.116578.19643HepG2BUD13
chr167214337672143408+3'-UTR,CDS,intron-Distal3.624074.17155HepG2BCLAF1
chr167214631772146404+3'-UTR,CDS,intron-Distal4.529383.46058HepG2PABPN1
chr167214278372142825+3'-UTR,CDS,intron-Distal,intron-Proximal3.941593.19682HepG2PABPN1
chr167214248372142533+3'-UTR,CDS,intron-Distal,intron-Proximal3.115793.60559HepG2AQR
chr167214118172141257+3'-UTR,CDS,intron-Distal,intron-Proximal4.605366.30573HepG2SF3B4
chr167214485472144880+3'-UTR,CDS,intron-Distal,intron-Proximal3.889737.83545HepG2PPIG
chr167214231772142393+3'-UTR,CDS,intron-Distal,intron-Proximal3.8636511.26073HepG2PRPF8
chr167214497272145019+3'-UTR,CDS,intron-Distal,intron-Proximal4.309378.60557HepG2AQR
chr167214248472142549+3'-UTR,CDS,intron-Distal,intron-Proximal3.6910911.40635HepG2PRPF8
chr167214624772146348+3'-UTR,CDS,intron-Distal,intron-Proximal5.559809.24583HepG2AQR
chr167214331372143369+3'-UTR,CDS,intron-Distal,intron-Proximal3.798094.27313HepG2PABPN1
chr167214220672142280+3'-UTR,CDS,intron-Distal3.551573.28107HepG2PABPN1
chr167213004772130072+3'-UTR,5'-UTR,CDS3.311073.99908K562BUD13
chr167214628472146351+3'-UTR,CDS,intron-Distal,intron-Proximal4.992115.26064K562AQR
chr167214242772142505+3'-UTR,CDS,intron-Distal4.496755.91381K562LIN28B
chr167214000972140073+3'-UTR,CDS,intron-Distal,intron-Proximal4.467666.99120K562AQR
chr167214338672143409+3'-UTR,CDS,intron-Distal3.636237.40563HepG2PPIG
chr167214121272141265+3'-UTR,CDS,intron-Distal,intron-Proximal4.116076.01372K562AQR
chr167214232772142402+3'-UTR,CDS,intron-Distal,intron-Proximal3.824253.05049HepG2SUPV3L1
chr167213003972130085+3'-UTR,5'-UTR,CDS3.942978.48086K562UCHL5
chr167214244072142507+3'-UTR,CDS,intron-Distal,intron-Proximal4.524355.61176HepG2PABPN1
chr167214490672144969+3'-UTR,CDS,intron-Distal,intron-Proximal3.500795.12130HepG2LSM11
chr167214233072142402+3'-UTR,CDS,intron-Distal,intron-Proximal4.7357310.37996HepG2BUD13
chr167212786172127932+5'-UTR,intron-Distal,intron-Proximal3.2304411.67572K562ZNF622
chr167212786372127923+5'-UTR,intron-Distal,intron-Proximal4.3135211.63125K562UCHL5
chr167212785972127928+5'-UTR,intron-Distal,intron-Proximal4.1097916.57604HepG2GRWD1
chr167212786172127917+5'-UTR,intron-Distal,intron-Proximal3.260743.74115HepG2UCHL5
chr167212794072127950+5'-UTR,intron-Distal4.497665.11007HepG2GRWD1
chr167213433472134433+CDS,intron-Distal,intron-Proximal3.580934.77403HepG2SRSF1
chr167213085472130908+CDS,intron-Distal3.8113112.28783K562UCHL5
chr167213751072137567+CDS,intron-Distal5.331889.52979K562FXR2
chr167213157672131667+CDS,intron-Distal3.061098.70861HepG2GRWD1
chr167213750072137566+CDS,intron-Distal,intron-Proximal4.2420017.27651HepG2GRWD1
chr167213020272130252+CDS3.545125.96568HepG2GRWD1
chr167213087572130909+CDS,intron-Distal,intron-Proximal4.478229.05280HepG2GRWD1
chr167213438472134437+CDS,intron-Distal3.600245.91846K562GRWD1
chr167213759472137650+CDS,intron-Distal3.307436.39378K562FXR2
chr167213502372135061+CDS,intron-Distal3.038046.01489HepG2GRWD1
chr167213700572137099+CDS,intron-Distal3.9821411.99757K562ZNF622
chr167213029172130361+CDS,intron-Proximal3.761926.61082K562GRWD1
chr167213087372130910+CDS,intron-Distal,intron-Proximal4.577644.98895HepG2FXR2
chr167213085172130875+CDS,intron-Distal5.278468.78094HepG2GRWD1
chr167213313872133161+CDS,intron-Distal3.885566.84754HepG2GRWD1
chr167213376772133778+CDS,intron-Distal3.507524.65365HepG2GRWD1
chr167213364972133725+CDS,intron-Distal3.909924.65332HepG2ZNF800
chr167213293272132980+CDS,intron-Distal,intron-Proximal3.663765.00154HepG2AQR
chr167213697572136992+CDS,intron-Distal3.778325.77244K562UCHL5
chr167213802572138086+CDS,intron-Distal,intron-Proximal3.697544.01163K562RBM15
chr167213438572134454+CDS,intron-Distal4.016779.81646HepG2GRWD1
chr167213433572134380+CDS,intron-Distal3.8860310.93752HepG2GRWD1
chr167213085072130904+CDS,intron-Distal3.725103.21664HepG2UCHL5
chr167213031872130368+CDS,intron-Proximal3.357298.45049K562UCHL5
chr167213028772130307+CDS3.662775.52031HepG2GRWD1
chr167213026972130318+CDS3.7220810.13632K562UCHL5
chr167213157672131675+CDS,intron-Distal3.001557.55086K562GRWD1
chr167213446772134496+CDS,intron-Distal4.2746310.62705HepG2GRWD1
chr167213760372137646+CDS,intron-Distal4.950695.96254K562FMR1
chr167213364672133737+CDS,intron-Distal3.3746411.99332K562UCHL5
chr167213697272137074+CDS,intron-Distal,intron-Proximal5.341838.03056HepG2FXR2
chr167213900372139024+CDS,intron-Distal3.539589.94493HepG2PPIG
chr167213750072137575+CDS,intron-Distal,intron-Proximal3.9109716.44414K562UCHL5
chr167213902472139036+CDS,intron-Distal3.244019.68144HepG2PPIG
chr167213284072132873+CDS,intron-Distal4.746417.64336HepG2GRWD1
chr167213366872133707+CDS,intron-Distal4.197818.39611HepG2GRWD1
chr167213253872132587+CDS,intron-Distal,intron-Proximal3.099383.90373HepG2AQR
chr167213828172138387+CDS,intron-Distal,intron-Proximal3.265817.82816K562RBFOX2
chr167213750072137569+CDS,intron-Distal,intron-Proximal3.344227.93146K562GRWD1
chr167213802572138046+CDS,intron-Distal,intron-Proximal3.788083.18939HepG2RBFOX2
chr167213498472135009+CDS,intron-Distal,intron-Proximal5.021639.57147HepG2GRWD1
chr167213913172139141+CDS,intron-Distal,intron-Proximal3.433504.45064HepG2GRWD1
chr167213704372137111+CDS,intron-Distal,intron-Proximal4.4037416.42772K562UCHL5
chr167213079772130854+CDS,intron-Distal4.4549011.37918K562UCHL5
chr167213901172139034+CDS,intron-Distal3.241285.54854HepG2GRWD1
chr167213254572132604+CDS,intron-Distal3.387937.47194HepG2GRWD1
chr167213031772130363+CDS,intron-Proximal4.194756.84316HepG2BCLAF1
chr167213434172134480+CDS,intron-Distal3.411743.29499HepG2PRPF4
chr167213897372138997+CDS,intron-Distal3.606215.86107HepG2PPIG
chr167213167972131686+CDS,intron-Distal,intron-Proximal4.496607.53589K562AQR
chr167213033672130364+CDS,intron-Proximal5.183657.64336HepG2GRWD1
chr167213364272133741+CDS,intron-Distal3.688846.85549HepG2FXR2
chr167213847672138518+CDS,intron-Distal3.6818811.10209HepG2PPIG
chr167213913072139188+CDS,intron-Distal,intron-Proximal3.2422713.74429HepG2PPIG
chr167213706572137093+CDS,intron-Distal3.131483.49055K562GRWD1
chr167213440972134424+CDS,intron-Distal4.041143.95301K562ZNF622
chr167213706772137088+CDS,intron-Distal4.055198.94272HepG2GRWD1
chr167213751172137563+CDS,intron-Distal3.416075.33841K562DDX24
chr167213256672132602+CDS,intron-Distal4.239254.67299K562DDX24
chr167213080372130913+CDS,intron-Distal,intron-Proximal3.2866812.56573K562ZNF622
chr167213750072137562+CDS,intron-Distal,intron-Proximal3.6795611.97898K562ZNF622
chr167213032172130360+CDS,intron-Proximal3.618125.24705K562BUD13
chr167213316172133176+CDS,intron-Distal3.343595.33987HepG2GRWD1
chr167213790172137973+CDS,intron-Distal3.4978610.47321HepG2GRWD1
chr167213012472130174+CDS3.155555.81406HepG2GRWD1
chr167213433472134380+CDS,intron-Distal,intron-Proximal4.468103.94867K562FXR2
chr167213251472132566+CDS,intron-Distal,intron-Proximal5.621126.75320K562AQR
chr167213313472133178+CDS,intron-Distal3.214556.54511K562UCHL5
chr167213157672131626+CDS,intron-Distal4.1708110.57284K562UCHL5
chr167213705072137067+CDS,intron-Distal3.979385.52031HepG2GRWD1
chr167213082372130851+CDS,intron-Distal3.826244.65365HepG2GRWD1
chr167213438072134433+CDS,intron-Distal3.327425.59104K562BUD13
chr167213545872135502+CDS,intron-Distal3.984918.33890K562UCHL5
chr167213548772135512+CDS,intron-Distal,intron-Proximal3.370123.47312HepG2FXR2
chr167213265572132684+CDS,intron-Distal3.477525.14253HepG2GRWD1
chr167213366372133724+CDS,intron-Distal3.653427.02942K562FXR2
chr167213884572138935+CDS,intron-Distal,intron-Proximal5.1086711.52732K562SF3B4
chr167213439772134443+CDS,intron-Distal3.412113.60202K562FXR2
chr167213750172137564+CDS,intron-Distal4.448897.30246HepG2FXR2
chr167213802472138089+CDS,intron-Distal,intron-Proximal3.7400313.56463HepG2PRPF8
chr167213829772138410+CDS,intron-Distal,intron-Proximal3.089153.80334HepG2U2AF2
chr167213433472134382+CDS,intron-Distal,intron-Proximal3.789337.79455K562UCHL5
chr167213318672133227+intron-Distal,intron-Proximal3.853344.49024K562AQR
chr167213818772138260+intron-Distal3.038914.68044K562BUD13
chr167213805272138094+intron-Distal,intron-Proximal4.5435610.48177HepG2RBFOX2
chr167213883372138912+intron-Distal,intron-Proximal4.552265.59044HepG2SF3B4
chr167213809372138170+intron-Distal,intron-Proximal3.906808.81766HepG2XPO5
chr167213514472135192+intron-Distal,intron-Proximal3.964544.49024K562AQR
chr167213828772138375+intron-Distal,intron-Proximal4.6235810.41441K562DDX24
chr167214006072140112+intron-Distal,intron-Proximal4.916545.93128HepG2PRPF8
chr167213514272135273+intron-Distal,intron-Proximal4.828395.51162HepG2U2AF2
chr167214296872143031+intron-Distal5.594547.28100K562EFTUD2
chr167213775072137838+intron-Distal,intron-Proximal6.0594211.88848HepG2SMNDC1
chr167213810072138177+intron-Distal,intron-Proximal4.131697.12877K562RBFOX2
chr167214282472142866+intron-Distal,intron-Proximal5.221837.28294K562AQR
chr167214497672145023+intron-Distal,intron-Proximal4.903369.76577HepG2PRPF8
chr167213818172138264+intron-Distal3.771148.79035K562RBFOX2
chr167213818372138261+intron-Distal4.2376010.93795HepG2RBFOX2
chr167213830272138367+intron-Distal,intron-Proximal4.465139.94489K562BUD13
chr167213830772138346+intron-Distal,intron-Proximal3.698997.40563HepG2PPIG
chr167213831372138345+intron-Distal,intron-Proximal3.854815.30739HepG2BUD13
chr167213805472138160+intron-Distal,intron-Proximal4.7380713.15564K562HNRNPM
chr167213168672131754+intron-Distal,intron-Proximal5.2616914.81877K562AQR
chr167213829872138382+intron-Distal,intron-Proximal3.5134111.33760HepG2RBFOX2
chr167213777272137824+intron-Distal,intron-Proximal4.025043.05889HepG2SF3B4
chr167213809472138161+intron-Distal,intron-Proximal3.530809.24642HepG2RBFOX2
chr167213810172138159+intron-Distal,intron-Proximal3.291444.61842HepG2HNRNPM
chr167213953072139555+intron-Distal,intron-Proximal4.692245.01842HepG2PRPF8
chr167213320472133278+intron-Distal,intron-Proximal5.330296.03057K562EFTUD2
chr167213820372138237+intron-Distal3.884005.07449K562DDX24
chr167213821172138261+intron-Distal3.578507.54792HepG2PRPF8
chr167213803072138138+intron-Distal,intron-Proximal3.113756.70540K562AQR
chr167213805972138099+intron-Distal,intron-Proximal4.366163.83824K562BUD13
chr167213965072139677+intron-Distal3.942173.12843K562PRPF8
chr167213820172138257+intron-Distal4.367244.73315K562TIA1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DHX38 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DHX38 is not available on ENCORE database.

  • 62 RBPs can affect the levels of DHX38.  








The Knockdown/knockout RNA-Seq assay for DHX38 is not available on ENCORE database.





62 RBPs can affect the gene expression of DHX38 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DHX38ENSG00000140829.73107.421402507.402500.309405.682504.87290HepG2ACO1
DHX38ENSG00000140829.71770.392602208.80870-0.319202.238701.52830HepG2ASCC1
DHX38ENSG00000140829.71470.574701871.99510-0.348202.639701.75960HepG2BCLAF1
DHX38ENSG00000140829.71817.063602216.66950-0.286802.872102.08790HepG2CALR
DHX38ENSG00000140829.72993.092802506.761900.255704.452803.64760HepG2CKAP4
DHX38ENSG00000140829.72660.397301836.883400.534303.190502.36540HepG2CNOT7
DHX38ENSG00000140829.71662.688902701.21290-0.7001010.355509.10960HepG2CPSF6
DHX38ENSG00000140829.71392.868902146.82150-0.624108.804407.66440HepG2DDX21
DHX38ENSG00000140829.71727.963202118.54090-0.294002.075801.39600HepG2DDX55
DHX38ENSG00000140829.71505.442001827.70870-0.279804.194603.42310HepG2DNAJC2
DHX38ENSG00000140829.71063.306501977.22800-0.8949010.174808.17480HepG2AGO1
DHX38ENSG00000140829.74035.869804510.69770-0.160501.978201.45140HepG2ETF1
DHX38ENSG00000140829.72420.051001615.311800.583106.281205.12410HepG2FUBP3
DHX38ENSG00000140829.73389.099002354.944100.525105.529604.57430HepG2FXR1
DHX38ENSG00000140829.72370.393802851.26540-0.266503.386302.36660HepG2HNRNPA2B1
DHX38ENSG00000140829.72993.082602212.497700.435904.532103.65780HepG2HNRNPK
DHX38ENSG00000140829.72179.661902922.06600-0.422904.038903.29300HepG2HNRNPLL
DHX38ENSG00000140829.72365.713502056.943900.201702.332801.77220HepG2HNRNPU
DHX38ENSG00000140829.73470.201202368.851800.550705.278004.43200HepG2MATR3
DHX38ENSG00000140829.72233.859202897.97780-0.375503.863902.91160HepG2MSI2
DHX38ENSG00000140829.72936.911901945.894900.593802.546801.50210HepG2NONO
DHX38ENSG00000140829.72664.302702331.272300.192502.265501.76100HepG2PTBP1
DHX38ENSG00000140829.72280.632402936.63970-0.364703.679703.00370HepG2PUF60
DHX38ENSG00000140829.72022.408003770.08740-0.8985029.9524028.61190HepG2RBM22
DHX38ENSG00000140829.72751.534102416.510500.187202.263601.69950HepG2RECQL
DHX38ENSG00000140829.76293.472803659.561800.782107.851006.67440HepG2SF3A3
DHX38ENSG00000140829.73761.775402426.903800.632206.499205.65510HepG2SF3B4
DHX38ENSG00000140829.71761.389403218.10970-0.869508.092306.75670HepG2SNRNP70
DHX38ENSG00000140829.73699.392704258.13760-0.202903.329202.79570HepG2SRFBP1
DHX38ENSG00000140829.73318.069602533.264800.389205.917205.29090HepG2SRSF1
DHX38ENSG00000140829.73247.959702899.648800.163602.023701.47780HepG2SRSF5
DHX38ENSG00000140829.72629.109802061.034300.351106.752605.95880HepG2SRSF9
DHX38ENSG00000140829.71994.137302417.87030-0.278002.246901.39610HepG2SUPT6H
DHX38ENSG00000140829.71852.946302848.38790-0.620308.609907.43090HepG2TARDBP
DHX38ENSG00000140829.72333.275101998.527200.223302.049701.60600HepG2TIAL1
DHX38ENSG00000140829.72060.543402371.96220-0.203102.719202.05290HepG2ZC3H8
DHX38ENSG00000140829.73126.262003569.39950-0.191203.116002.54580HepG2ZNF622
DHX38ENSG00000140829.73510.921802558.294100.456609.677008.69770K562AGGF1
DHX38ENSG00000140829.73575.519702662.060700.425505.274104.35880K562AKAP8L
DHX38ENSG00000140829.73614.744102948.989100.293602.525701.95940K562AQR
DHX38ENSG00000140829.73324.567101680.236100.9844018.7539016.12720K562EFTUD2
DHX38ENSG00000140829.72241.723202581.58410-0.203602.085001.44560K562EIF2S2
DHX38ENSG00000140829.72631.696301798.649400.549003.803502.57200K562EIF3D
DHX38ENSG00000140829.71451.842201070.138200.440005.182104.10920K562EIF3G
DHX38ENSG00000140829.71823.697601470.238400.310703.251501.82850K562EWSR1
DHX38ENSG00000140829.72087.312501751.613600.252902.797102.18880K562FXR1
DHX38ENSG00000140829.7451.003801097.40460-1.282908.328906.96610K562G3BP2
DHX38ENSG00000140829.72791.997403440.12980-0.301203.043302.25200K562GRSF1
DHX38ENSG00000140829.73013.682802596.061000.215102.158601.36980K562HNRNPU
DHX38ENSG00000140829.71952.595003059.05050-0.647709.622708.16430K562HSPD1
DHX38ENSG00000140829.72091.318401544.433200.437203.207102.07330K562IGF2BP2
DHX38ENSG00000140829.73518.660302824.972500.316703.620602.66100K562KIF1C
DHX38ENSG00000140829.73857.204003164.702200.285403.104902.13250K562MBNL1
DHX38ENSG00000140829.73056.760002218.239300.462503.474102.46130K562NAA15
DHX38ENSG00000140829.72294.782701442.944500.6692010.218408.28670K562PCBP2
DHX38ENSG00000140829.71935.254102561.15010-0.404303.910602.91060K562PPIG
DHX38ENSG00000140829.72717.865601635.072700.7330010.546709.07500K562PRPF8
DHX38ENSG00000140829.74296.389602639.749800.7026011.7593010.68740K562PUS1
DHX38ENSG00000140829.73678.264902572.273900.5159010.673109.53390K562RBM15
DHX38ENSG00000140829.73754.146102936.049100.354505.825504.67550K562SF3A3
DHX38ENSG00000140829.72129.401801661.690600.357702.432201.52570K562SF3B1
DHX38ENSG00000140829.72418.956901140.222001.0850021.6666019.09950K562SF3B4
DHX38ENSG00000140829.74845.911403023.985700.680203.361201.95300K562SNRNP200
DHX38ENSG00000140829.72285.479701545.075100.564706.067705.02830K562SRSF1
DHX38ENSG00000140829.72048.631301563.435500.389802.624301.93360K562TARDBP
DHX38ENSG00000140829.71944.530201508.184000.366502.687901.88220K562TIA1
DHX38ENSG00000140829.72081.354101480.643000.491203.239502.04110K562TRA2A
DHX38ENSG00000140829.7609.803301097.91080-0.848307.079005.80220K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DHX38 is not available on ENCORE database.





8 RBPs can affect the splicing of DHX38 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDHX38ENSG00000140829.7chr16+721315757213168072130743721309087213254372132691-0.057000.000190.00496excludedHepG2U2AF1
SEDHX38ENSG00000140829.7chr16+721315757213168072130720721309087213254372132691-0.061000.000010.00262excludedHepG2SRSF7
SEDHX38ENSG00000140829.7chr16+721315757213168072130825721309087213254372132691-0.051000.001250.06621excludedHepG2NCBP2
SEDHX38ENSG00000140829.7chr16+721315757213168072130825721309087213254372132691-0.080000.000230.01194excludedK562TARDBP
SEDHX38ENSG00000140829.7chr16+721315757213168072130720721309087213254372132691-0.064000.000440.02010excludedK562HNRNPU
A3SSDHX38ENSG00000140829.7chr16+7213151272131680721315757213168072130825721309080.118000.000000.00001longerK562U2AF2
A3SSDHX38ENSG00000140829.7chr16+7213988272140003721399037214000372139344721395230.122000.000000.00000longerK562AQR
A3SSDHX38ENSG00000140829.7chr16+7214121772141447721412387214144772139903721400160.073000.000270.00216longerK562AQR
A3SSDHX38ENSG00000140829.7chr16+7213151272131680721315757213168072130825721309080.070000.000080.00529longerK562U2AF1
A5SSDHX38ENSG00000140829.7chr16+721399037214001672139903721400037214123872141447-0.168000.000070.00725shorterHepG2HNRNPK
RIDHX38ENSG00000140829.7chr16+7213282572133179721328257213294472133102721331790.094000.000000.00003includedHepG2U2AF2
RIDHX38ENSG00000140829.7chr16+7213282572133179721328257213294472133102721331790.069000.000010.00012includedHepG2U2AF1
RIDHX38ENSG00000140829.7chr16+7213282572133179721328257213294472133102721331790.071000.000000.00000includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DHX38 is not avaliable on ENCORE database.