CNEP1R1

General Information

Gene Name       : CNEP1R1
Gene ID             : ENSG00000205423.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CNEP1R1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CNEP1R1ENSG00000205423.1110.749.3910.07ENCSR000AEF
HepG2CNEP1R1ENSG00000205423.118.9317.2713.10ENCSR985KAT
K562CNEP1R1ENSG00000205423.115.835.925.88ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CNEP1R1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CNEP1R1 RNA is bound by 4 proteins.  







eCLIP assay for CNEP1R1 is not avaliable on ENCORE database.





4 proteins are bound to CNEP1R1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr165007050050070555+3'-UTR3.795593.19539K562YBX3
chr165006942550069549+3'-UTR4.305353.45943HepG2BCLAF1
chr165007058250070678+3'-UTR4.637087.35577K562PUM2
chr165005924350059299+CDS,intron-Proximal4.068049.08333HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CNEP1R1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CNEP1R1 is not available on ENCORE database.

  • 61 RBPs can affect the levels of CNEP1R1.  








The Knockdown/knockout RNA-Seq assay for CNEP1R1 is not available on ENCORE database.





61 RBPs can affect the gene expression of CNEP1R1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CNEP1R1ENSG00000205423.7436.26690277.611400.652004.203902.91120HepG2AATF
CNEP1R1ENSG00000205423.71066.52680692.788700.622304.811904.13600HepG2AKAP1
CNEP1R1ENSG00000205423.7495.61520393.779100.331702.233001.53650HepG2AKAP8L
CNEP1R1ENSG00000205423.7800.18510583.708400.455005.002104.12370HepG2AUH
CNEP1R1ENSG00000205423.7421.22990304.682200.467202.673102.08430HepG2BOP1
CNEP1R1ENSG00000205423.7548.78140346.539400.663106.098905.00880HepG2CALR
CNEP1R1ENSG00000205423.7761.64150544.609800.483803.397802.54600HepG2CIRBP
CNEP1R1ENSG00000205423.7498.33090391.854700.346702.578501.93190HepG2CKAP4
CNEP1R1ENSG00000205423.7284.58210400.87060-0.494303.331202.21450HepG2YBX3
CNEP1R1ENSG00000205423.7560.83580306.703900.870608.537007.41560HepG2DDX21
CNEP1R1ENSG00000205423.71266.50000663.663600.9322011.7604010.55320HepG2DDX3X
CNEP1R1ENSG00000205423.7668.66540317.643801.073807.220305.68170HepG2DDX59
CNEP1R1ENSG00000205423.7773.45960570.043200.440202.547201.95340HepG2DDX6
CNEP1R1ENSG00000205423.7448.01830282.139500.667003.796102.48750HepG2AGO1
CNEP1R1ENSG00000205423.71152.10840670.137800.7816015.9228014.67550HepG2ETF1
CNEP1R1ENSG00000205423.7656.23260391.120300.746504.943303.47590HepG2FUS
CNEP1R1ENSG00000205423.7345.84790439.13890-0.344502.126801.58710HepG2HNRNPU
CNEP1R1ENSG00000205423.7456.26330614.68100-0.430002.213101.64570HepG2MATR3
CNEP1R1ENSG00000205423.7523.64680331.745900.658405.685604.56370HepG2MSI2
CNEP1R1ENSG00000205423.7821.66070629.171200.385002.238301.66590HepG2NCBP2
CNEP1R1ENSG00000205423.7643.60780457.846200.491202.054201.30540HepG2PABPC1
CNEP1R1ENSG00000205423.7371.77170560.36880-0.592004.002203.14490HepG2PABPC4
CNEP1R1ENSG00000205423.7291.86800434.70180-0.574704.177703.16140HepG2PARN
CNEP1R1ENSG00000205423.7600.37600370.280400.697104.188202.92670HepG2PCBP2
CNEP1R1ENSG00000205423.7301.23300391.68090-0.378802.281101.60480HepG2PPIL4
CNEP1R1ENSG00000205423.7581.57050389.282700.579002.904801.65920HepG2PRPF6
CNEP1R1ENSG00000205423.7478.30980334.108600.517503.132302.27800HepG2PRPF8
CNEP1R1ENSG00000205423.7731.39110519.774100.492705.304004.59720HepG2PTBP1
CNEP1R1ENSG00000205423.7703.77570399.204700.8179013.1989012.02760HepG2PUS1
CNEP1R1ENSG00000205423.7661.49860357.411600.888105.172404.22470HepG2RAVER1
CNEP1R1ENSG00000205423.7849.75950560.119100.601207.506406.75130HepG2RBM22
CNEP1R1ENSG00000205423.7647.37240510.898100.341502.129301.53190HepG2RBM25
CNEP1R1ENSG00000205423.7281.74190391.08650-0.473103.283202.59180HepG2SAFB2
CNEP1R1ENSG00000205423.7761.58510412.877400.883205.522304.55030HepG2SF3A3
CNEP1R1ENSG00000205423.7162.27650344.60750-1.086502.766501.32420HepG2SFPQ
CNEP1R1ENSG00000205423.7455.12830589.10690-0.372302.812302.10460HepG2SLBP
CNEP1R1ENSG00000205423.7343.40480456.09630-0.409402.142601.56460HepG2SMN1
CNEP1R1ENSG00000205423.7541.11760333.299000.699003.760902.84410HepG2SNRNP70
CNEP1R1ENSG00000205423.7756.11170632.647700.257102.134501.67640HepG2SRFBP1
CNEP1R1ENSG00000205423.7693.53580564.850100.296002.055601.63120HepG2SRSF1
CNEP1R1ENSG00000205423.7613.24090459.533100.416203.806003.17970HepG2SRSF9
CNEP1R1ENSG00000205423.7828.55580549.312200.592908.523807.72040HepG2SSB
CNEP1R1ENSG00000205423.7533.05900333.987300.674403.104301.82460HepG2SUB1
CNEP1R1ENSG00000205423.7655.12520431.072600.603704.125503.32360HepG2SUPV3L1
CNEP1R1ENSG00000205423.7703.82050507.701000.471104.350503.67180HepG2TAF15
CNEP1R1ENSG00000205423.7469.08260294.901200.669504.945404.01660HepG2TARDBP
CNEP1R1ENSG00000205423.7331.19930430.51430-0.378402.547702.00200HepG2TRIM56
CNEP1R1ENSG00000205423.7584.56200350.589200.737506.039905.12880HepG2U2AF1
CNEP1R1ENSG00000205423.7514.51690353.512500.541404.813504.05940HepG2UTP3
CNEP1R1ENSG00000205423.7360.37180255.919400.493703.527302.78290HepG2ZC3H8
CNEP1R1ENSG00000205423.7553.65160402.705100.459204.501803.84800HepG2ZNF622
CNEP1R1ENSG00000205423.7446.02310296.178100.590603.746203.08390K562AQR
CNEP1R1ENSG00000205423.7122.55180175.27880-0.516302.054701.36090K562EIF3G
CNEP1R1ENSG00000205423.7326.32270193.326200.755202.559201.40030K562HNRNPA2B1
CNEP1R1ENSG00000205423.7384.00270253.377600.599702.848801.95130K562NAA15
CNEP1R1ENSG00000205423.7260.91900131.484700.988605.825004.73350K562PRPF8
CNEP1R1ENSG00000205423.7170.93060285.71700-0.741203.191802.48420K562PTBP1
CNEP1R1ENSG00000205423.7583.02220301.547000.951109.416708.46430K562PUS1
CNEP1R1ENSG00000205423.7432.11610293.810300.556404.125303.41780K562RBM15
CNEP1R1ENSG00000205423.7177.23320288.41660-0.702502.826501.72130K562NELFE
CNEP1R1ENSG00000205423.7124.33500198.07130-0.671802.419801.49020K562RPS3
CNEP1R1ENSG00000205423.7195.78050280.07070-0.516601.971801.36260K562SRSF1
CNEP1R1ENSG00000205423.7118.99770191.21830-0.684302.776601.72280K562SRSF4
CNEP1R1ENSG00000205423.7357.10610240.788600.568502.945101.81170K562U2AF1
CNEP1R1ENSG00000205423.7370.44780248.695000.574803.999603.03610K562U2AF2
CNEP1R1ENSG00000205423.7252.73980187.891900.427602.135301.49790K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CNEP1R1 is not available on ENCORE database.





11 RBPs can affect the splicing of CNEP1R1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECNEP1R1ENSG00000205423.7chr16+5005956150059612500583205005925150060306500603780.268000.001170.03577includedK562AKAP8L
SECNEP1R1ENSG00000205423.7chr16+5005956150059612500583205005925150060306500603780.403000.000040.00201includedHepG2HNRNPK
SECNEP1R1ENSG00000205423.7chr16+500595615005961250058320500592515006030650060378-0.331000.006450.06499excludedHepG2U2AF2
SECNEP1R1ENSG00000205423.7chr16+500595615005961250058320500592515006030650060378-0.322000.000000.00011excludedHepG2NCBP2
SECNEP1R1ENSG00000205423.7chr16+500595615005961250058320500592515006030650060378-0.420000.000060.01523excludedHepG2HNRNPA1
SECNEP1R1ENSG00000205423.7chr16+5005956150059612500583205005925150060306500603780.268000.000460.04193includedHepG2DDX6
SECNEP1R1ENSG00000205423.7chr16+5005956150059612500583205005925150060306500603780.319000.000200.03950includedHepG2RBM15
SECNEP1R1ENSG00000205423.7chr16+500595615005961250058320500592515006030650060378-0.345000.000600.01682excludedHepG2SRSF1
SECNEP1R1ENSG00000205423.7chr16+500595615005961250058320500592515006030650060378-0.375000.000010.00235excludedHepG2IGF2BP3
SECNEP1R1ENSG00000205423.7chr16+5005956150059612500583205005925150060306500603780.422000.001100.06912includedK562HNRNPUL1
SECNEP1R1ENSG00000205423.7chr16+500595615005961250058320500592515006030650060378-0.352000.000560.02938excludedHepG2SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CNEP1R1 is not avaliable on ENCORE database.