CITED4

General Information

Gene Name       : CITED4
Gene ID             : ENSG00000179862.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CITED4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CITED4ENSG00000179862.60.000.020.01ENCSR000AEF
HepG2CITED4ENSG00000179862.62.511.011.76ENCSR985KAT
K562CITED4ENSG00000179862.60.060.080.07ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CITED4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CITED4 RNA is bound by 2 proteins.  







eCLIP assay for CITED4 is not avaliable on ENCORE database.





2 proteins are bound to CITED4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr14132685841326958-3'-UTR5.111006.96706HepG2LARP4
chr14132714041327213-3'-UTR4.171203.70195HepG2UPF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CITED4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CITED4 is not available on ENCORE database.

  • 64 RBPs can affect the levels of CITED4.  








The Knockdown/knockout RNA-Seq assay for CITED4 is not available on ENCORE database.





64 RBPs can affect the gene expression of CITED4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CITED4ENSG00000179862.5344.55650170.258701.016905.986704.65870HepG2ABCF1
CITED4ENSG00000179862.551.1419094.87050-0.891502.184801.70610HepG2AKAP1
CITED4ENSG00000179862.5167.1741095.164000.812804.020403.10760HepG2AKAP8L
CITED4ENSG00000179862.536.5345074.57220-1.029402.471101.73590HepG2CIRBP
CITED4ENSG00000179862.5158.6221094.697000.744103.488002.75670HepG2CKAP4
CITED4ENSG00000179862.5215.05050126.411600.766403.590702.81800HepG2CPSF6
CITED4ENSG00000179862.5102.1121051.325500.992303.549102.72770HepG2DAZAP1
CITED4ENSG00000179862.5175.6493087.603901.003505.941704.78300HepG2DDX19B
CITED4ENSG00000179862.5183.73160102.891600.836403.941102.74200HepG2DDX5
CITED4ENSG00000179862.585.1286032.566901.386102.973802.30180HepG2DNAJC2
CITED4ENSG00000179862.5142.9170082.894700.785702.591201.97130HepG2EIF4A3
CITED4ENSG00000179862.590.1068048.499900.893602.413401.65060HepG2EIF4G2
CITED4ENSG00000179862.5215.78920124.770400.790203.033702.40870HepG2ETF1
CITED4ENSG00000179862.5218.8101092.556701.241208.689107.22380HepG2EWSR1
CITED4ENSG00000179862.542.14040126.63180-1.587404.409003.13390HepG2FTO
CITED4ENSG00000179862.5273.37310143.292700.931805.194604.33510HepG2GPKOW
CITED4ENSG00000179862.5107.2134033.161901.692803.797103.05750HepG2HNRNPA1
CITED4ENSG00000179862.5142.4808089.146500.676403.050002.29920HepG2HNRNPF
CITED4ENSG00000179862.575.4090036.645601.041003.013602.38310HepG2HNRNPU
CITED4ENSG00000179862.5176.9667087.785901.011306.190405.15030HepG2IGF2BP1
CITED4ENSG00000179862.582.1467037.431701.133803.873503.02110HepG2ILF2
CITED4ENSG00000179862.556.9599020.003101.509602.702101.52590HepG2KHDRBS1
CITED4ENSG00000179862.5182.23110111.122500.713502.505701.32640HepG2KRR1
CITED4ENSG00000179862.5299.49520110.510401.438306.794805.47800HepG2LARP4
CITED4ENSG00000179862.5187.4905083.733701.162805.956805.00610HepG2MAGOH
CITED4ENSG00000179862.589.59450139.06570-0.634302.178301.45540HepG2MSI2
CITED4ENSG00000179862.5142.9220086.165800.729902.276001.69930HepG2NCBP2
CITED4ENSG00000179862.581.9959035.218101.219102.437901.41770HepG2NONO
CITED4ENSG00000179862.534.7223076.69560-1.143303.079202.31930HepG2PABPC4
CITED4ENSG00000179862.584.2432032.684401.365905.038204.07200HepG2PPIL4
CITED4ENSG00000179862.564.8078029.529901.133902.054101.35400HepG2PRPF8
CITED4ENSG00000179862.5102.7183048.580101.080203.622402.95200HepG2PUF60
CITED4ENSG00000179862.5129.9571051.567101.333407.050406.19280HepG2PUM1
CITED4ENSG00000179862.587.4132040.037401.126402.571301.61700HepG2RBM27
CITED4ENSG00000179862.5174.6383096.002000.863104.329803.50510HepG2RPLP0
CITED4ENSG00000179862.5115.7306061.172100.919703.063702.42110HepG2RPS19
CITED4ENSG00000179862.586.7832036.916601.233003.032802.19520HepG2RPS2
CITED4ENSG00000179862.5101.2729021.076502.264409.502908.05050HepG2RPS3A
CITED4ENSG00000179862.586.5384032.632601.406905.277504.44030HepG2SAFB2
CITED4ENSG00000179862.548.7530019.846201.296502.584601.31870HepG2SART3
CITED4ENSG00000179862.582.4037046.575000.823102.208401.57010HepG2SLBP
CITED4ENSG00000179862.594.0302038.051901.305104.998904.17680HepG2SMN1
CITED4ENSG00000179862.585.2564037.270801.193703.696701.82350HepG2SND1
CITED4ENSG00000179862.552.83690150.60160-1.511106.076204.91140HepG2SNRNP70
CITED4ENSG00000179862.5147.7757091.057500.698502.504302.04870HepG2SRSF1
CITED4ENSG00000179862.593.5124047.962400.963203.012502.36190HepG2SRSF5
CITED4ENSG00000179862.5156.0192087.576400.833004.422503.57450HepG2SRSF7
CITED4ENSG00000179862.530.6991074.07470-1.270804.037103.39390HepG2SRSF9
CITED4ENSG00000179862.5156.76140102.228500.616702.060501.60170HepG2SSB
CITED4ENSG00000179862.5117.5365054.549401.107404.547303.78610HepG2SUCLG1
CITED4ENSG00000179862.5121.8102038.138701.675205.413804.51670HepG2SUPV3L1
CITED4ENSG00000179862.527.5229081.82850-1.572005.662804.91050HepG2TAF15
CITED4ENSG00000179862.5200.64800133.298700.589902.266601.60150HepG2TARDBP
CITED4ENSG00000179862.5161.0492035.595802.1776015.7418014.72600HepG2TIAL1
CITED4ENSG00000179862.593.6576047.456100.980702.856301.96830HepG2TUFM
CITED4ENSG00000179862.567.40480135.45060-1.006804.962004.28290HepG2ZNF622
CITED4ENSG00000179862.581.7071038.202601.096703.194901.79130HepG2ZRANB2
CITED4ENSG00000179862.531.3956011.143501.494302.148001.56960K562AKAP8L
CITED4ENSG00000179862.526.503404.462402.570203.031502.24240K562GRSF1
CITED4ENSG00000179862.530.226007.766801.960303.098002.15600K562HNRNPU
CITED4ENSG00000179862.523.260605.728102.021702.458701.69530K562MTPAP
CITED4ENSG00000179862.527.067106.363702.088502.955502.18860K562NSUN2
CITED4ENSG00000179862.540.1328011.056301.859803.262702.68080K562PUS1
CITED4ENSG00000179862.535.5523010.768501.723002.853102.25190K562RBM15
CITED4ENSG00000179862.532.285506.931402.219602.757801.82310K562TIAL1
CITED4ENSG00000179862.523.785505.773602.042402.719301.84980K562WDR3
CITED4ENSG00000179862.526.337309.071601.537602.238901.47430K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CITED4 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CITED4 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CITED4 is not avaliable on ENCORE database.