CEP104

General Information

Gene Name       : CEP104
Gene ID             : ENSG00000116198.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CEP104)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CEP104ENSG00000116198.1217.1313.3215.22ENCSR000AEF
HepG2CEP104ENSG00000116198.1222.8523.2423.05ENCSR985KAT
K562CEP104ENSG00000116198.1231.8736.0833.98ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CEP104 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CEP104 RNA is bound by 19 proteins.  







eCLIP assay for CEP104 is not avaliable on ENCORE database.





19 proteins are bound to CEP104 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr137307953730860-3'-UTR,intron-Distal3.360403.07801K562UPF1
chr137298393729896-3'-UTR,intron-Distal4.361316.71790K562AKAP1
chr137651923765247-CDS,intron-Distal3.442173.95301K562ZNF622
chr137458803745990-CDS,intron-Distal,intron-Proximal3.435876.46304K562SF3B4
chr137614723761538-CDS,intron-Distal4.255783.32022K562UCHL5
chr137429403742999-CDS,intron-Distal4.372824.04372HepG2BCLAF1
chr137537523753858-CDS,intron-Distal,intron-Proximal4.704435.70555K562PRPF8
chr137539763754062-CDS,intron-Distal,intron-Proximal4.693015.58500K562UCHL5
chr137423143742405-CDS,intron-Distal,intron-Proximal3.810033.12746HepG2GRWD1
chr137476553747707-CDS,intron-Distal3.278323.12941K562UCHL5
chr137459003745956-CDS,intron-Distal,intron-Proximal4.305633.45799HepG2U2AF2
chr137458073745871-CDS,intron-Distal,intron-Proximal3.265503.39477K562BUD13
chr137504313750520-CDS,intron-Distal3.760343.38114HepG2GRWD1
chr137462843746358-CDS,intron-Distal,intron-Proximal3.366346.65588K562AQR
chr137618623761911-CDS,intron-Distal4.611843.71570HepG2BCLAF1
chr137555363755593-CDS,intron-Distal,intron-Proximal4.833075.50697K562UCHL5
chr137555263755684-CDS,intron-Distal,intron-Proximal3.228285.54854HepG2GRWD1
chr137555933755665-CDS,intron-Distal,intron-Proximal4.235468.35706K562UCHL5
chr137556263755683-CDS,intron-Distal,intron-Proximal4.676664.70478HepG2BCLAF1
chr137555433755684-CDS,intron-Distal,intron-Proximal4.031838.54758K562ZNF622
chr137561693756248-CDS,intron-Distal,intron-Proximal3.091703.18789HepG2BCLAF1
chr137651723765222-CDS,intron-Distal4.630114.70478HepG2BCLAF1
chr137514403751521-CDS,intron-Distal,intron-Proximal4.398694.67689HepG2PPIG
chr137514693751590-CDS,intron-Distal,intron-Proximal4.425287.52225K562UCHL5
chr137538703753945-CDS,intron-Distal,intron-Proximal3.687844.51739HepG2BCLAF1
chr137636793763769-intron-Distal4.406165.19823K562KHSRP
chr137413023741381-intron-Distal4.002155.18268HepG2DDX59
chr137401513740211-intron-Distal,intron-Proximal3.817524.05505HepG2SF3B4
chr137415163741575-intron-Distal4.4664411.13760K562DROSHA
chr137413393741434-intron-Distal4.240277.99029HepG2HNRNPK
chr137365513736676-intron-Distal3.182814.63615HepG2HNRNPL
chr137401373740208-intron-Distal,intron-Proximal3.713955.47851K562SF3B4
chr137506663750766-intron-Distal,intron-Proximal4.431834.76003K562KHSRP
chr137412713741460-intron-Distal6.0403717.47122K562HNRNPK
chr137415093741611-intron-Distal4.845487.72290HepG2HNRNPK
chr137565983756704-intron-Distal3.455413.91876HepG2U2AF2
chr137365263736604-intron-Distal3.270024.08528HepG2SUGP2
chr137646633764798-intron-Distal3.301914.10408K562KHSRP
chr137414343741486-intron-Distal4.184513.65412HepG2HNRNPK
chr137613603761459-intron-Distal,intron-Proximal3.676914.23459K562PRPF8
chr137630083763089-intron-Distal4.245364.94603K562CSTF2T
chr137514233751477-intron-Distal,intron-Proximal3.846563.31827HepG2GRWD1
chr137413713741463-intron-Distal3.401808.34844K562DROSHA
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CEP104 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CEP104 is not available on ENCORE database.

  • 54 RBPs can affect the levels of CEP104.  








The Knockdown/knockout RNA-Seq assay for CEP104 is not available on ENCORE database.





54 RBPs can affect the gene expression of CEP104 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CEP104ENSG00000116198.8952.26260673.755800.499003.189902.62330HepG2AKAP1
CEP104ENSG00000116198.8698.69820529.638600.399602.370701.65020HepG2CIRBP
CEP104ENSG00000116198.8319.47860488.45000-0.612505.629404.17900HepG2YBX3
CEP104ENSG00000116198.8900.78620645.399000.480903.371002.68960HepG2DDX3X
CEP104ENSG00000116198.8345.60670479.64340-0.472803.629202.82970HepG2DNAJC21
CEP104ENSG00000116198.8258.00930484.23820-0.908308.351407.31760HepG2HNRNPA1
CEP104ENSG00000116198.8333.44920535.05460-0.682207.990407.00090HepG2HNRNPU
CEP104ENSG00000116198.8761.20380594.494900.356501.987501.42730HepG2MAGOH
CEP104ENSG00000116198.8779.67190640.880000.282702.121701.59360HepG2SF3B4
CEP104ENSG00000116198.8423.22450555.68550-0.392803.391202.69100HepG2SMN1
CEP104ENSG00000116198.8487.11340720.60980-0.565002.808702.02240HepG2SNRNP70
CEP104ENSG00000116198.81046.35640868.446100.268802.774102.27190HepG2SRFBP1
CEP104ENSG00000116198.8805.54070668.946700.268002.015601.59430HepG2SRSF1
CEP104ENSG00000116198.8414.92360519.94550-0.325501.987301.54840HepG2TIAL1
CEP104ENSG00000116198.8327.44040487.27190-0.573503.608702.78880HepG2XRN2
CEP104ENSG00000116198.8931.79020789.839200.238302.232101.72600HepG2ZNF622
CEP104ENSG00000116198.8731.976901256.16470-0.7792016.3440015.08720K562AGGF1
CEP104ENSG00000116198.81076.283101380.23120-0.358903.130002.07030K562AKAP8
CEP104ENSG00000116198.8790.606401307.07080-0.725309.930908.59310K562AKAP8L
CEP104ENSG00000116198.81027.851101371.38360-0.416005.251203.94710K562ATP5C1
CEP104ENSG00000116198.81973.612001526.952700.370102.871402.20790K562DDX47
CEP104ENSG00000116198.81181.293601406.66220-0.251902.531701.69840K562DKC1
CEP104ENSG00000116198.81032.13990767.459000.427402.802001.75870K562EIF3D
CEP104ENSG00000116198.8924.06610724.043300.351803.065602.22840K562EIF3G
CEP104ENSG00000116198.8883.62650638.901000.467703.872602.90600K562EIF4A3
CEP104ENSG00000116198.8924.978301166.86900-0.335202.053101.31940K562FIP1L1
CEP104ENSG00000116198.81252.15030664.425100.9141019.6745018.17370K562FXR1
CEP104ENSG00000116198.8735.116401181.46370-0.684502.982301.70310K562HNRNPA2B1
CEP104ENSG00000116198.8666.811301062.33590-0.6719010.157208.46480K562HNRNPU
CEP104ENSG00000116198.81252.583901582.13290-0.337002.007801.32500K562HSPD1
CEP104ENSG00000116198.8964.442501387.21840-0.524404.189503.14800K562KIF1C
CEP104ENSG00000116198.81053.66330825.120400.352602.952002.08390K562MAGOH
CEP104ENSG00000116198.8975.688701327.83670-0.444604.040802.66540K562MAK16
CEP104ENSG00000116198.81070.57360823.455600.378503.311902.29170K562MATR3
CEP104ENSG00000116198.81171.984001554.02250-0.407102.405001.56590K562MBNL1
CEP104ENSG00000116198.8634.908101089.24940-0.778706.706205.11460K562NAA15
CEP104ENSG00000116198.81146.353701331.58810-0.216102.364401.67060K562NSUN2
CEP104ENSG00000116198.8587.000101033.85030-0.816603.958702.72030K562PABPN1
CEP104ENSG00000116198.8984.22480800.915700.297202.263001.53840K562POLR2G
CEP104ENSG00000116198.8980.979801324.51780-0.433203.100802.22430K562PPIG
CEP104ENSG00000116198.8545.02040789.58310-0.534804.238203.08390K562PSIP1
CEP104ENSG00000116198.8970.62800801.651700.275801.987301.40770K562PTBP1
CEP104ENSG00000116198.83176.491001994.220700.6715011.8235010.12680K562PUF60
CEP104ENSG00000116198.8728.447001296.43860-0.8317011.3213010.27150K562PUS1
CEP104ENSG00000116198.8687.658801263.03240-0.8771017.2955015.79190K562RBM15
CEP104ENSG00000116198.8388.39620543.42080-0.484503.446001.94270K562RBM25
CEP104ENSG00000116198.8761.381101271.96860-0.740403.041501.40710K562RBM39
CEP104ENSG00000116198.81018.77440710.486800.519903.832102.86790K562RPS19
CEP104ENSG00000116198.8788.41490552.198900.513703.493002.35690K562RPS3
CEP104ENSG00000116198.8585.18360945.71520-0.692502.501401.38030K562SF1
CEP104ENSG00000116198.81089.915901313.96490-0.269702.550501.76610K562SF3A3
CEP104ENSG00000116198.8396.88980595.70670-0.585905.511804.27810K562SF3B4
CEP104ENSG00000116198.8513.26950682.80570-0.411802.725301.71050K562SRFBP1
CEP104ENSG00000116198.81356.15220785.879200.7870012.7874011.26450K562SRSF1
CEP104ENSG00000116198.81024.51920803.297900.350802.987102.12980K562SYNCRIP
CEP104ENSG00000116198.8579.70800759.46230-0.389702.270701.42930K562TIAL1
CEP104ENSG00000116198.8558.53970806.68910-0.530404.486303.21650K562TRIM56
CEP104ENSG00000116198.8392.55880555.35860-0.500502.916201.78930K562U2AF1
CEP104ENSG00000116198.8411.01920573.48750-0.480603.350602.46910K562U2AF2
CEP104ENSG00000116198.81639.108201411.912500.215202.142501.50430K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CEP104 is not available on ENCORE database.





12 RBPs can affect the splicing of CEP104 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECEP104ENSG00000116198.8chr1-374327137433083742933374300037458293745870-0.291000.000090.00288excludedK562SF3B4
SECEP104ENSG00000116198.8chr1-375305837532563751625375165637538553753909-0.566000.000000.00000excludedHepG2U2AF1
SECEP104ENSG00000116198.8chr1-374327137433083742933374300037458293745870-0.072000.003450.07955excludedK562AKAP8L
SECEP104ENSG00000116198.8chr1-3738495373862637328433732934373973737398050.130000.000350.00582includedHepG2U2AF2
SECEP104ENSG00000116198.8chr1-375305837532563751625375165637538553753909-0.314000.000140.00272excludedHepG2U2AF2
SECEP104ENSG00000116198.8chr1-3753213375325637514883751656375385537539090.292000.000910.09809includedK562DROSHA
SECEP104ENSG00000116198.8chr1-374582937459373739987374012637463543746561-0.080000.004240.05488excludedK562PUS1
SECEP104ENSG00000116198.8chr1-375552737556833753855375408337561713756340-0.307000.000420.01127excludedK562U2AF1
SECEP104ENSG00000116198.8chr1-375305837532563751625375165637538553753909-0.242000.004560.09830excludedHepG2SF3A3
SECEP104ENSG00000116198.8chr1-374327137433083742933374300037458293745870-0.101000.002960.07591excludedK562UTP18
SECEP104ENSG00000116198.8chr1-375305837532563751625375165637538553753909-0.366000.000210.00533excludedK562U2AF2
SECEP104ENSG00000116198.8chr1-375552737556833753855375408337561713756340-0.115000.000350.01687excludedK562HNRNPU
SECEP104ENSG00000116198.8chr1-374327137433083742933374300037458293745870-0.066000.004990.09283excludedK562AGGF1
SECEP104ENSG00000116198.8chr1-3741815374198337399873740126374232137424300.079000.004380.06266includedK562HNRNPC
A3SSCEP104ENSG00000116198.8chr1-3764038376419537640383764177376517137653450.052000.000680.05928longerK562AGGF1
A3SSCEP104ENSG00000116198.8chr1-3764038376422837640383764177376517137653450.138000.000000.00001longerK562AQR
A3SSCEP104ENSG00000116198.8chr1-3765171376538337651713765345376885837689850.100000.000300.00234longerK562AQR
A3SSCEP104ENSG00000116198.8chr1-3739737373983737397373739805373998737401260.057000.001370.00923longerK562AQR
A3SSCEP104ENSG00000116198.8chr1-3768858376903037688583768985377345237737580.302000.000490.00369longerK562AQR
A3SSCEP104ENSG00000116198.8chr1-3732843373308637328433732934373973737398370.078000.002060.01321longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CEP104 is not avaliable on ENCORE database.