BCL3

General Information

Gene Name       : BCL3
Gene ID             : ENSG00000069399.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: BCL3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878BCL3ENSG00000069399.140.663.311.99ENCSR000AEF
HepG2BCL3ENSG00000069399.145.552.143.84ENCSR985KAT
K562BCL3ENSG00000069399.140.670.450.56ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for BCL3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • BCL3 RNA is bound by 6 proteins.  







eCLIP assay for BCL3 is not avaliable on ENCORE database.





6 proteins are bound to BCL3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr194525230145252355+CDS,intron-Distal,intron-Proximal4.824726.03362HepG2AQR
chr194526272845262862+CDS4.335464.53890K562PCBP1
chr194526268545262763+CDS5.9396318.56190HepG2PCBP2
chr194526096245261028+CDS,intron-Proximal5.6922410.77812HepG2PRPF8
chr194526276345262862+CDS5.7580419.92749HepG2PCBP2
chr194526044645260496+CDS,intron-Proximal4.017355.93840HepG2PRPF8
chr194525229945252377+CDS,intron-Distal,intron-Proximal4.434357.99161HepG2PRPF8
chr194525987045259966+intron-Distal3.695963.26022HepG2PRPF4
chr194525969245259797+intron-Distal,intron-Proximal5.564157.41664HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BCL3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BCL3 is not available on ENCORE database.

  • 66 RBPs can affect the levels of BCL3.  








The Knockdown/knockout RNA-Seq assay for BCL3 is not available on ENCORE database.





66 RBPs can affect the gene expression of BCL3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BCL3ENSG00000069399.8449.95080213.189301.077507.352805.91510HepG2ABCF1
BCL3ENSG00000069399.8332.06210159.154801.0609010.730309.34270HepG2AKAP8L
BCL3ENSG00000069399.8155.3428097.317000.674602.720401.98460HepG2DAZAP1
BCL3ENSG00000069399.8136.8247067.769401.013504.190803.37270HepG2DDX21
BCL3ENSG00000069399.8253.32920119.580001.082904.140803.39650HepG2DDX6
BCL3ENSG00000069399.8291.87100151.573400.945207.529406.51450HepG2DKC1
BCL3ENSG00000069399.8118.0131060.323600.968103.904503.08110HepG2DNAJC21
BCL3ENSG00000069399.8103.6800059.781400.794302.845402.18580HepG2DNAJC2
BCL3ENSG00000069399.8148.7145083.800100.827402.624001.72380HepG2EEF2
BCL3ENSG00000069399.8235.16970114.827701.034101.987501.47520HepG2EIF2S1
BCL3ENSG00000069399.8312.88610126.836501.302605.977405.04110HepG2EIF4A3
BCL3ENSG00000069399.8151.4247091.944200.719702.413601.65060HepG2EIF4G2
BCL3ENSG00000069399.8152.5043060.548401.332606.644505.25810HepG2GEMIN5
BCL3ENSG00000069399.8112.4007060.351300.897102.401801.45740HepG2GNB2L1
BCL3ENSG00000069399.8313.35920191.077400.713603.769303.03170HepG2GPKOW
BCL3ENSG00000069399.8199.9390060.901401.7149011.8102010.62450HepG2HNRNPA1
BCL3ENSG00000069399.8327.86670182.347600.846305.433104.58060HepG2HNRNPLL
BCL3ENSG00000069399.8182.43330116.351300.648802.866102.12900HepG2IGF2BP1
BCL3ENSG00000069399.8295.21920128.892001.195504.564803.77220HepG2MATR3
BCL3ENSG00000069399.8254.21770174.063400.546402.115601.40330HepG2MSI2
BCL3ENSG00000069399.8282.16020185.945400.601502.198901.34150HepG2MTPAP
BCL3ENSG00000069399.8179.3408096.497200.894003.225702.40460HepG2NOL12
BCL3ENSG00000069399.8166.4422082.537701.011803.554101.92480HepG2NOLC1
BCL3ENSG00000069399.8227.9379087.853701.375404.107703.01170HepG2PABPC1
BCL3ENSG00000069399.8148.1922067.328401.138103.849102.91590HepG2PRPF8
BCL3ENSG00000069399.8238.9294092.104101.3751010.015708.97910HepG2PUF60
BCL3ENSG00000069399.8194.5621097.696300.993805.128104.22850HepG2PUM2
BCL3ENSG00000069399.8124.0112057.937201.097802.871601.79010HepG2RCC2
BCL3ENSG00000069399.8174.31920120.630200.531001.990201.51500HepG2NELFE
BCL3ENSG00000069399.8127.3670066.193600.944103.398202.72520HepG2RPS19
BCL3ENSG00000069399.8533.02790259.257401.039708.382907.15920HepG2SF3A3
BCL3ENSG00000069399.8180.5510065.743501.457403.595401.88840HepG2SFPQ
BCL3ENSG00000069399.8182.2700060.541401.590004.940903.06090HepG2SNRNP200
BCL3ENSG00000069399.8127.89090200.82980-0.651102.061401.39140HepG2SNRNP70
BCL3ENSG00000069399.8139.6980090.924000.619502.023301.47750HepG2SRSF5
BCL3ENSG00000069399.855.0099095.83340-0.800802.394201.87320HepG2SRSF9
BCL3ENSG00000069399.8240.89490139.211500.791005.314804.64970HepG2SSB
BCL3ENSG00000069399.8163.80580103.418800.663402.570801.96650HepG2SUCLG1
BCL3ENSG00000069399.8184.4019086.965701.084203.654802.89370HepG2SUPV3L1
BCL3ENSG00000069399.846.91690105.89410-1.174404.197703.52880HepG2TAF15
BCL3ENSG00000069399.8193.9689065.397401.5684011.6442010.74420HepG2TIAL1
BCL3ENSG00000069399.8390.98030184.044901.086907.957806.89480HepG2U2AF1
BCL3ENSG00000069399.8325.6556070.460302.208408.762006.90940HepG2U2AF2
BCL3ENSG00000069399.8316.19630229.921900.459602.843502.13650HepG2UPF1
BCL3ENSG00000069399.8535.72270252.869801.0830018.1617017.06400HepG2ZNF622
BCL3ENSG00000069399.8128.8264075.855300.764002.509401.96420K562AGGF1
BCL3ENSG00000069399.8153.1109083.362200.877004.173702.91260K562AKAP8
BCL3ENSG00000069399.866.1866029.315701.174802.655501.80150K562BOP1
BCL3ENSG00000069399.8112.2059038.793301.532203.670802.41580K562CNOT7
BCL3ENSG00000069399.833.299509.419001.821802.607701.58490K562CSTF2
BCL3ENSG00000069399.870.5907034.314101.040602.806501.75700K562DDX3X
BCL3ENSG00000069399.887.7476019.500202.169808.929407.75000K562EIF2S2
BCL3ENSG00000069399.886.0872031.718201.440404.469803.38040K562FMR1
BCL3ENSG00000069399.883.5099026.886301.635005.476804.13900K562FTO
BCL3ENSG00000069399.816.5810037.28190-1.168901.879701.36180K562FXR1
BCL3ENSG00000069399.877.7551029.756001.385704.000003.05010K562GPKOW
BCL3ENSG00000069399.882.9316032.874401.334902.980401.70220K562HNRNPA2B1
BCL3ENSG00000069399.874.9912024.321601.624404.640903.88670K562HNRNPC
BCL3ENSG00000069399.871.0748031.423101.177403.294802.32130K562HNRNPU
BCL3ENSG00000069399.880.7237025.413501.667303.066902.07810K562KRR1
BCL3ENSG00000069399.8145.8206093.833500.635902.311201.49220K562MBNL1
BCL3ENSG00000069399.864.9333029.046101.160502.775001.89720K562METAP2
BCL3ENSG00000069399.8104.1221058.255300.837702.791602.04210K562NSUN2
BCL3ENSG00000069399.887.8327037.269801.236702.621601.42900K562PABPC1
BCL3ENSG00000069399.869.7888028.730801.280302.369501.46770K562PABPN1
BCL3ENSG00000069399.891.8908047.814400.942402.469301.56140K562PUM2
BCL3ENSG00000069399.891.3799035.343401.370302.953001.35220K562RBM39
BCL3ENSG00000069399.884.8747028.306801.584104.809503.50160K562SF3B1
BCL3ENSG00000069399.891.4651031.993601.515303.842402.20510K562SFPQ
BCL3ENSG00000069399.846.7708018.882101.308502.432701.48660K562SRFBP1
BCL3ENSG00000069399.853.0322020.976201.338002.717301.79000K562TIAL1
BCL3ENSG00000069399.8105.1048061.769800.766802.387201.71720K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BCL3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of BCL3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for BCL3 is not avaliable on ENCORE database.