ARF6

General Information

Gene Name       : ARF6
Gene ID             : ENSG00000165527.6
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: ARF6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ARF6ENSG00000165527.652.0850.9351.50ENCSR000AEF
HepG2ARF6ENSG00000165527.618.9524.1921.57ENCSR985KAT
K562ARF6ENSG00000165527.618.5819.3818.98ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ARF6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ARF6 RNA is bound by 10 proteins.  







eCLIP assay for ARF6 is not avaliable on ENCORE database.





10 proteins are bound to ARF6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr145036119550361245+3'-UTR4.5366011.67496K562TIA1
chr145036118850361242+3'-UTR4.139793.43811HepG2TIA1
chr145036138150361408+3'-UTR3.030783.31456K562TIA1
chr145036118950361239+3'-UTR4.689453.84661K562U2AF1
chr145036137650361421+3'-UTR4.327443.03253HepG2TIA1
chr145036133950361428+3'-UTR4.491714.23960HepG2TIAL1
chr145035983250359876+5'-UTR,intron-Proximal4.8547148.46128HepG2DDX3X
chr145036012550360217+5'-UTR3.919066.83645K562FTO
chr145035983450359877+5'-UTR,intron-Proximal3.769769.84768K562DDX3X
chr145036000250360114+5'-UTR4.8275778.31027HepG2DDX3X
chr145036011450360161+5'-UTR4.9876034.58615HepG2DDX3X
chr145036005950360072+5'-UTR4.023583.73926K562RBM15
chr145036026250360345+5'-UTR3.649695.11589K562FTO
chr145036038350360443+5'-UTR4.767637.70265K562RBM15
chr145035983250359873+5'-UTR4.264964.00551K562DROSHA
chr145036016550360219+5'-UTR5.3817350.25197HepG2DDX3X
chr145035997750360116+5'-UTR3.093408.39995K562FTO
chr145035983350359878+5'-UTR,intron-Proximal3.668935.67405K562FTO
chr145036042350360451+5'-UTR6.6927311.95715HepG2DDX3X
chr145036039050360450+5'-UTR3.753827.18138HepG2RBM15
chr145035997250360002+5'-UTR,intron-Proximal4.8118729.88091HepG2DDX3X
chr145036026650360325+5'-UTR5.2138825.75075HepG2DDX3X
chr145036038550360423+5'-UTR4.3385418.70677HepG2DDX3X
chr145036021950360266+5'-UTR4.669638.43072HepG2DDX3X
chr145036000050360203+5'-UTR4.532477.25157HepG2FTO
chr145036004150360069+5'-UTR4.202894.66602K562DDX3X
chr145035983150359879+5'-UTR,intron-Proximal4.534036.32078HepG2RPS3
chr145036077250360829+CDS3.692565.48157K562IGF2BP2
chr145036050550360538+CDS3.941836.04229K562RBM15
chr145036059650360644+CDS4.781785.59156HepG2RBM15
chr145036063850360724+CDS4.180534.98640K562YBX3
chr145036052650360638+CDS3.844526.82724K562YBX3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ARF6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ARF6 is not available on ENCORE database.

  • 58 RBPs can affect the levels of ARF6.  








The Knockdown/knockout RNA-Seq assay for ARF6 is not available on ENCORE database.





58 RBPs can affect the gene expression of ARF6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ARF6ENSG00000165527.5818.17660596.662500.455405.504104.70430HepG2ACO1
ARF6ENSG00000165527.5912.91540736.201200.310302.961002.25480HepG2AUH
ARF6ENSG00000165527.5585.27380738.73470-0.335902.158901.47220HepG2CALR
ARF6ENSG00000165527.5448.05680596.48220-0.412803.904003.14030HepG2CKAP4
ARF6ENSG00000165527.5755.68440588.815300.359903.041202.37300HepG2CELF1
ARF6ENSG00000165527.5253.45760429.37280-0.760506.016805.06060HepG2DDX21
ARF6ENSG00000165527.5652.30120845.32710-0.374002.534501.56280HepG2DDX5
ARF6ENSG00000165527.51022.10670782.011400.386203.183401.92260HepG2EIF2S2
ARF6ENSG00000165527.5953.55820413.245601.2062017.1051015.10170HepG2EIF3D
ARF6ENSG00000165527.5812.18130580.834200.483603.054702.38370HepG2EIF4A3
ARF6ENSG00000165527.5754.83960565.559600.416401.952701.36790HepG2EIF4B
ARF6ENSG00000165527.5811.58560583.000900.477104.202103.17270HepG2EWSR1
ARF6ENSG00000165527.5563.65600387.998900.538703.057601.98390HepG2GNB2L1
ARF6ENSG00000165527.5998.646401356.11900-0.441402.272001.69550HepG2HNRNPLL
ARF6ENSG00000165527.5416.25540552.60630-0.408802.141101.53790HepG2IGF2BP2
ARF6ENSG00000165527.5790.87000589.571500.423702.385801.79750HepG2MATR3
ARF6ENSG00000165527.5721.016201382.78070-0.939506.414604.90380HepG2MTPAP
ARF6ENSG00000165527.5786.69040627.837400.325302.394801.68680HepG2NOL12
ARF6ENSG00000165527.5886.363501202.36440-0.439902.153501.49090HepG2NSUN2
ARF6ENSG00000165527.5612.93410376.988700.701103.600202.57770HepG2PABPC1
ARF6ENSG00000165527.5488.20860668.58640-0.453604.433403.47910HepG2PRPF4
ARF6ENSG00000165527.5487.14010607.73200-0.319102.535301.93860HepG2PUS1
ARF6ENSG00000165527.5915.63900706.466200.374103.698603.12200HepG2RBM22
ARF6ENSG00000165527.5558.26240402.130600.473203.236102.57790HepG2RPS19
ARF6ENSG00000165527.5573.95430403.562100.508003.205702.19060HepG2SERBP1
ARF6ENSG00000165527.5999.987201342.36510-0.424802.097601.47740HepG2SF3B1
ARF6ENSG00000165527.5665.78950504.131700.401204.080603.32500HepG2SMN1
ARF6ENSG00000165527.5917.401601493.58960-0.703204.260703.28380HepG2SNRNP70
ARF6ENSG00000165527.51264.36180797.935000.6640013.7066012.81730HepG2SRFBP1
ARF6ENSG00000165527.5857.43650692.809500.307502.849702.33120HepG2SSB
ARF6ENSG00000165527.5831.49700672.963100.305102.654702.04250HepG2SUCLG1
ARF6ENSG00000165527.5380.37070541.85670-0.510504.146903.48130HepG2TAF15
ARF6ENSG00000165527.5975.809501321.45110-0.437501.989801.36280HepG2TARDBP
ARF6ENSG00000165527.5382.22730497.88780-0.381402.363901.58980HepG2TIA1
ARF6ENSG00000165527.51420.85950890.458600.674007.660606.61950HepG2U2AF1
ARF6ENSG00000165527.51779.38650817.418001.122103.847702.67280HepG2U2AF2
ARF6ENSG00000165527.5459.99010619.71340-0.430002.122701.39530HepG2UBE2L3
ARF6ENSG00000165527.51317.73090741.698500.8291011.5344010.44470HepG2UTP3
ARF6ENSG00000165527.5807.19360659.801300.290802.655701.99670HepG2ZC3H8
ARF6ENSG00000165527.5606.71260438.802000.467302.610801.47030K562AARS
ARF6ENSG00000165527.51236.44990791.234700.6439011.5367010.47190K562AGGF1
ARF6ENSG00000165527.51182.35810823.311900.522105.294604.37600K562AKAP8L
ARF6ENSG00000165527.5731.568701066.23440-0.543506.135104.97140K562CPSF6
ARF6ENSG00000165527.5868.724201241.69120-0.515305.714104.31490K562CELF1
ARF6ENSG00000165527.51468.028401064.373100.463807.103006.12650K562DDX47
ARF6ENSG00000165527.5562.49710362.008600.635703.682102.17590K562EEF2
ARF6ENSG00000165527.5851.65610648.430200.393203.145302.38480K562EIF2S2
ARF6ENSG00000165527.5715.18240413.872000.789004.854103.48200K562EIF3A
ARF6ENSG00000165527.5885.63500374.376801.2421013.4023010.96360K562EIF3D
ARF6ENSG00000165527.5535.56110288.847300.890609.837308.33270K562EIF3G
ARF6ENSG00000165527.51103.06800873.752400.336102.412201.64960K562KIF1C
ARF6ENSG00000165527.5664.12250486.957200.447602.908901.41430K562LIN28B
ARF6ENSG00000165527.5625.92730795.47580-0.345803.146502.28490K562MTPAP
ARF6ENSG00000165527.5971.86700686.081900.502303.039702.10710K562NAA15
ARF6ENSG00000165527.5681.12870883.82980-0.375804.378303.46310K562NSUN2
ARF6ENSG00000165527.5609.03880897.70430-0.559704.309603.27050K562PCBP3
ARF6ENSG00000165527.5490.34300688.55960-0.489804.176603.19020K562POLR2G
ARF6ENSG00000165527.5508.70370340.326500.579803.596102.74040K562PRPF8
ARF6ENSG00000165527.51983.21260816.525401.280206.673805.87270K562PUS1
ARF6ENSG00000165527.51384.82100795.559600.799603.796203.11790K562RBM15
ARF6ENSG00000165527.5578.14500392.752500.557704.547503.27450K562RCC2
ARF6ENSG00000165527.5583.14180346.606600.750405.316704.18110K562RPS19
ARF6ENSG00000165527.5542.07320372.309800.541903.774902.52260K562SRFBP1
ARF6ENSG00000165527.5662.750001027.22780-0.632202.855801.58010K562STAU1
ARF6ENSG00000165527.5963.604901242.31790-0.366502.898901.46090K562UBE2L3
ARF6ENSG00000165527.5618.48480801.88310-0.374702.854201.96350K562WDR3
ARF6ENSG00000165527.51025.88430833.879000.298903.162002.26180K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ARF6 is not available on ENCORE database.






No RBPs affect the alternative splcing events of ARF6 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ARF6 is not avaliable on ENCORE database.