ACTR3B

General Information

Gene Name       : ACTR3B
Gene ID             : ENSG00000133627.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ACTR3B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ACTR3BENSG00000133627.176.377.036.70ENCSR000AEF
HepG2ACTR3BENSG00000133627.178.979.719.34ENCSR985KAT
K562ACTR3BENSG00000133627.1718.5816.6617.62ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ACTR3B is not avaliable on ENCORE database.



Proteins bound to RNA
  • ACTR3B RNA is bound by 9 proteins.  







eCLIP assay for ACTR3B is not avaliable on ENCORE database.





9 proteins are bound to ACTR3B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7152551821152551905+3'-UTR3.337514.39142HepG2PCBP2
chr7152552030152552141+3'-UTR4.240316.21733K562PUM2
chr7152456912152457012+5'-UTR,CDS,intron-Proximal4.114454.66602K562DDX3X
chr7152513583152513655+CDS3.978373.20027K562ZNF622
chr7152522125152522243+CDS,intron-Proximal3.952013.82000HepG2GRWD1
chr7152526413152526476+intron-Distal4.975535.04993HepG2QKI
chr7152508653152508681+intron-Distal3.368263.68839K562KHSRP
chr7152508563152508652+intron-Distal3.745613.02234K562KHSRP
chr7152528492152528521+intron-Distal3.416023.37654K562EXOSC5
chr7152540013152540116+intron-Distal3.529755.38829K562KHSRP
chr7152520600152520654+intron-Proximal4.739114.48002K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ACTR3B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ACTR3B is not available on ENCORE database.

  • 60 RBPs can affect the levels of ACTR3B.  








The Knockdown/knockout RNA-Seq assay for ACTR3B is not available on ENCORE database.





60 RBPs can affect the gene expression of ACTR3B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ACTR3BENSG00000133627.13411.01070239.116300.781404.569303.90760HepG2AKAP1
ACTR3BENSG00000133627.13184.06550116.174100.663802.149001.32710HepG2BCCIP
ACTR3BENSG00000133627.13263.99280154.692000.771003.152402.33250HepG2CNOT7
ACTR3BENSG00000133627.1373.83620127.06080-0.783102.490901.83350HepG2CPSF6
ACTR3BENSG00000133627.1373.06010141.15050-0.950103.982903.18250HepG2DDX21
ACTR3BENSG00000133627.13141.0409095.097100.568502.257801.65610HepG2DNAJC2
ACTR3BENSG00000133627.13103.87120189.15210-0.864803.667102.99020HepG2EIF2S1
ACTR3BENSG00000133627.13118.43130195.64840-0.724203.048302.35170HepG2G3BP1
ACTR3BENSG00000133627.1392.25260144.04240-0.642801.893601.35740HepG2GPKOW
ACTR3BENSG00000133627.13274.88910186.162600.562203.118202.40520HepG2HNRNPL
ACTR3BENSG00000133627.13181.40030107.033500.761004.041003.31960HepG2HNRNPU
ACTR3BENSG00000133627.1381.77160137.81130-0.753002.477701.49430HepG2PCBP2
ACTR3BENSG00000133627.1391.57660193.40590-1.078606.362905.50830HepG2PUF60
ACTR3BENSG00000133627.13281.16890205.288200.453702.224201.68000HepG2PUM1
ACTR3BENSG00000133627.13182.09800256.52630-0.494402.513602.01350HepG2RBM22
ACTR3BENSG00000133627.13145.27020208.82920-0.523602.141101.54220HepG2RBM25
ACTR3BENSG00000133627.1385.87140189.58700-1.142606.396405.41930HepG2RPLP0
ACTR3BENSG00000133627.13139.84440230.88200-0.723303.733503.20510HepG2SRSF1
ACTR3BENSG00000133627.13114.88210172.90970-0.589902.517501.85070HepG2SRSF7
ACTR3BENSG00000133627.13162.36520104.932400.629702.792902.22680HepG2TRIM56
ACTR3BENSG00000133627.13129.7021067.170100.949203.766002.88100HepG2UCHL5
ACTR3BENSG00000133627.13174.01440111.932400.636502.027701.39880HepG2XRN2
ACTR3BENSG00000133627.1386.26040139.10450-0.689402.744102.07430HepG2ZC3H8
ACTR3BENSG00000133627.13232.30040318.31260-0.454502.531301.98370K562AGGF1
ACTR3BENSG00000133627.13283.41000677.00690-1.2563016.0438014.78870K562AQR
ACTR3BENSG00000133627.13271.85710383.89210-0.497903.418702.34660K562BCLAF1
ACTR3BENSG00000133627.13180.48250355.29790-0.977207.166605.73880K562BOP1
ACTR3BENSG00000133627.13289.80850420.30430-0.536302.869301.42320K562BUD13
ACTR3BENSG00000133627.13219.60250377.78580-0.782706.281605.10120K562CPSF6
ACTR3BENSG00000133627.13460.64580564.52230-0.293401.914601.35400K562DDX47
ACTR3BENSG00000133627.13189.01750327.44010-0.792705.260303.98010K562EFTUD2
ACTR3BENSG00000133627.13390.74970543.36670-0.475703.632102.82730K562EIF2S2
ACTR3BENSG00000133627.13134.62370226.67030-0.751702.544301.58340K562EIF3A
ACTR3BENSG00000133627.13192.11850350.59900-0.867805.494703.96950K562EIF3D
ACTR3BENSG00000133627.13204.46500384.38390-0.910707.085605.68710K562FMR1
ACTR3BENSG00000133627.13236.24210325.79820-0.463702.174901.36900K562FTO
ACTR3BENSG00000133627.13214.45020360.69420-0.750105.189904.10870K562GPKOW
ACTR3BENSG00000133627.13318.42470438.99280-0.463203.073201.94030K562HNRNPA1
ACTR3BENSG00000133627.13173.61440344.77980-0.989807.786806.83250K562HNRNPC
ACTR3BENSG00000133627.13479.75730341.156700.491803.508501.38800K562HNRNPH1
ACTR3BENSG00000133627.13689.99870510.173400.435503.369702.18910K562HNRNPL
ACTR3BENSG00000133627.13257.60480356.79650-0.469902.114101.30700K562HNRNPM
ACTR3BENSG00000133627.13228.81460335.32660-0.551402.502301.54260K562IGF2BP2
ACTR3BENSG00000133627.13186.14930307.98330-0.726403.391902.34600K562KRR1
ACTR3BENSG00000133627.13231.72760333.80210-0.526602.912601.48170K562LARP7
ACTR3BENSG00000133627.13248.76030352.07710-0.501102.662301.80660K562METAP2
ACTR3BENSG00000133627.13391.80140490.12250-0.323002.218201.54270K562NSUN2
ACTR3BENSG00000133627.13207.29050313.68800-0.597703.297502.22970K562PCBP2
ACTR3BENSG00000133627.13231.71770336.59340-0.538602.755601.33860K562PHF6
ACTR3BENSG00000133627.13200.54340309.12440-0.624303.341102.33480K562PSIP1
ACTR3BENSG00000133627.13588.41960903.33760-0.618406.007204.80810K562PUF60
ACTR3BENSG00000133627.13761.58360941.43490-0.305902.408101.51100K562PUM2
ACTR3BENSG00000133627.13187.51290328.50740-0.808905.266004.54790K562PUS1
ACTR3BENSG00000133627.13218.98220328.47930-0.585003.507902.55660K562RBM22
ACTR3BENSG00000133627.13205.50310324.57440-0.659403.281002.38940K562RPS19
ACTR3BENSG00000133627.13412.68750281.857300.550003.491102.26880K562SAFB
ACTR3BENSG00000133627.13383.69350483.68580-0.334102.067501.35520K562SF3A3
ACTR3BENSG00000133627.13198.80630343.02670-0.787004.664903.38250K562SF3B1
ACTR3BENSG00000133627.13223.11230335.74960-0.589603.505402.71610K562SRSF1
ACTR3BENSG00000133627.13218.58290317.05760-0.536602.944401.85550K562SRSF5
ACTR3BENSG00000133627.13241.20150356.50890-0.563704.175602.71910K562SRSF7
ACTR3BENSG00000133627.13171.84370308.52190-0.844304.975203.57870K562SUPV3L1
ACTR3BENSG00000133627.13415.07170317.287500.387502.225101.48740K562SYNCRIP
ACTR3BENSG00000133627.13197.40100297.33000-0.590902.849301.89920K562TIAL1
ACTR3BENSG00000133627.13390.06150568.70800-0.544005.283703.52230K562TROVE2
ACTR3BENSG00000133627.13329.54860519.69050-0.657206.817505.74510K562UPF1
ACTR3BENSG00000133627.13305.70940426.85310-0.481602.810401.59960K562UTP3
ACTR3BENSG00000133627.13282.85250444.67750-0.652705.156503.94290K562WDR3
ACTR3BENSG00000133627.13440.02870762.71340-0.793509.399007.69070K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ACTR3B is not available on ENCORE database.





9 RBPs can affect the splicing of ACTR3B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEACTR3BENSG00000133627.13chr7+1525087811525088181524987051524988161525116341525117300.445000.000000.00000includedK562SRSF1
SEACTR3BENSG00000133627.13chr7+152508781152508818152498705152498816152511634152511730-0.183000.000070.00993excludedHepG2QKI
SEACTR3BENSG00000133627.13chr7+152508781152508818152498705152498816152511634152511730-0.406000.000130.00242excludedHepG2U2AF2
SEACTR3BENSG00000133627.13chr7+152508781152508818152498705152498816152511634152511730-0.155000.000280.02289excludedHepG2AKAP1
SEACTR3BENSG00000133627.13chr7+152508781152508818152498705152498816152511634152511730-0.193000.000020.00361excludedHepG2DDX3X
SEACTR3BENSG00000133627.13chr7+152508781152508818152498705152498816152511634152511730-0.207000.001040.05820excludedHepG2NCBP2
SEACTR3BENSG00000133627.13chr7+152508781152508818152498705152498816152511634152511730-0.256000.000520.03717excludedHepG2FTO
SEACTR3BENSG00000133627.13chr7+152508781152508818152498705152498816152511634152511739-0.072000.000270.02415excludedK562HNRNPL
A3SSACTR3BENSG00000133627.13chr7+152513565152513673152513569152513673152511617152511730-0.077000.008430.04563shorterK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ACTR3B is not avaliable on ENCORE database.