ZNF827

General Information

Gene Name       : ZNF827
Gene ID             : ENSG00000151612.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF827)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF827ENSG00000151612.1512.3911.9312.16ENCSR000AEF
HepG2ZNF827ENSG00000151612.153.782.433.10ENCSR985KAT
K562ZNF827ENSG00000151612.150.010.000.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF827 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF827 RNA is bound by 5 proteins.  







eCLIP assay for ZNF827 is not avaliable on ENCORE database.





5 proteins are bound to ZNF827 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4146807183146807293-CDS,intron-Distal,intron-Proximal3.144953.39306HepG2GRWD1
chr4146770479146770638-CDS,intron-Distal,intron-Proximal4.326244.45558HepG2GRWD1
chr4146824198146824299-CDS,intron-Distal4.476135.13243HepG2GRWD1
chr4146799659146799790-intron-Distal4.507305.41368HepG2PTBP1
chr4146858973146859026-intron-Distal5.5140811.09198HepG2CSTF2T
chr4146858091146858136-intron-Distal5.090088.19768HepG2CSTF2T
chr4146858775146858828-intron-Distal3.986857.10319HepG2CSTF2T
chr4146858757146858839-intron-Distal4.902698.84898HepG2FAM120A
chr4146857821146857862-intron-Distal4.656406.44863HepG2CSTF2T
chr4146857751146857805-intron-Distal3.977547.48189HepG2CSTF2T
chr4146857270146857306-intron-Distal3.103313.23466HepG2CSTF2T
chr4146858589146858704-intron-Distal6.1805118.47904HepG2CSTF2T
chr4146825773146825913-intron-Distal3.755744.51074HepG2HNRNPL
chr4146857976146858040-intron-Distal3.958567.34629HepG2CSTF2T
chr4146858964146859030-intron-Distal5.421697.81647HepG2FAM120A
chr4146858089146858137-intron-Distal4.711233.99130HepG2FAM120A
chr4146858617146858721-intron-Distal3.682817.95421HepG2FAM120A
chr4146857867146857909-intron-Distal4.410503.99130HepG2FAM120A
chr4146857862146857900-intron-Distal3.131614.98353HepG2CSTF2T
chr4146857417146857458-intron-Distal4.551676.05659HepG2CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF827 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF827 is not available on ENCORE database.

  • 54 RBPs can affect the levels of ZNF827.  








The Knockdown/knockout RNA-Seq assay for ZNF827 is not available on ENCORE database.





54 RBPs can affect the gene expression of ZNF827 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF827ENSG00000151612.11623.26180378.129400.720905.195203.94560HepG2ABCF1
ZNF827ENSG00000151612.11392.63560315.189500.316901.853301.33780HepG2ACO1
ZNF827ENSG00000151612.11189.96790354.18710-0.898805.375904.66410HepG2AKAP1
ZNF827ENSG00000151612.11538.47530316.665100.765809.216607.91960HepG2AKAP8L
ZNF827ENSG00000151612.11391.15460544.52890-0.477302.026001.50730HepG2BOP1
ZNF827ENSG00000151612.11437.36770283.335700.626204.684703.09880HepG2BUD13
ZNF827ENSG00000151612.11306.26690499.92790-0.706903.370802.61960HepG2CPSF6
ZNF827ENSG00000151612.11421.35400311.439100.436002.514701.46200HepG2CPSF7
ZNF827ENSG00000151612.11434.45170273.992300.665004.871703.99860HepG2DDX21
ZNF827ENSG00000151612.11362.19770268.302100.432802.281201.46140HepG2DDX24
ZNF827ENSG00000151612.11709.08090339.251701.0635011.4826010.28970HepG2DDX3X
ZNF827ENSG00000151612.11387.27250567.69800-0.551802.230201.35540HepG2DDX59
ZNF827ENSG00000151612.11221.69270293.48050-0.404702.022801.41190HepG2DNAJC21
ZNF827ENSG00000151612.11397.92380279.454900.509802.583501.69010HepG2EEF2
ZNF827ENSG00000151612.11387.91780226.870500.773804.935803.75440HepG2EIF3D
ZNF827ENSG00000151612.11720.71030301.473201.2573011.8925010.51690HepG2EIF4B
ZNF827ENSG00000151612.11259.27190385.28320-0.571504.365403.35720HepG2EIF4G1
ZNF827ENSG00000151612.11637.41590491.897200.373802.979002.35870HepG2ETF1
ZNF827ENSG00000151612.11733.34020381.828300.941508.323507.06910HepG2FIP1L1
ZNF827ENSG00000151612.11986.08200500.741700.977503.996702.77500HepG2FTO
ZNF827ENSG00000151612.11289.80540195.808900.565502.819602.02570HepG2FUBP3
ZNF827ENSG00000151612.11439.38740289.782000.600403.564202.81280HepG2G3BP1
ZNF827ENSG00000151612.11305.91330202.003500.598603.038502.09680HepG2GEMIN5
ZNF827ENSG00000151612.11429.01680283.266600.598803.739002.55060HepG2GNB2L1
ZNF827ENSG00000151612.11453.18360296.292100.613004.168403.39780HepG2HNRNPA1
ZNF827ENSG00000151612.11258.83300360.15400-0.476603.190302.42360HepG2HNRNPF
ZNF827ENSG00000151612.11457.92810293.568300.641304.222103.37510HepG2HNRNPK
ZNF827ENSG00000151612.11525.77550263.468300.9967011.313009.62390HepG2HNRNPM
ZNF827ENSG00000151612.11271.57330354.64850-0.385002.003201.38000HepG2IGF2BP1
ZNF827ENSG00000151612.11469.85300296.292300.665103.702002.52240HepG2KHSRP
ZNF827ENSG00000151612.11659.87730309.063701.0942014.4190012.72930HepG2MSI2
ZNF827ENSG00000151612.11397.51070259.513200.615104.369802.84380HepG2NAA15
ZNF827ENSG00000151612.11731.30140321.676801.1848013.7387012.39530HepG2NCBP2
ZNF827ENSG00000151612.11344.74470479.54190-0.476102.034101.38760HepG2NSUN2
ZNF827ENSG00000151612.11389.79270286.406000.444502.120901.48090HepG2PABPC4
ZNF827ENSG00000151612.11363.18290271.806200.418002.462801.88250HepG2PCBP1
ZNF827ENSG00000151612.11362.95350208.067700.802605.106204.04360HepG2PRPF8
ZNF827ENSG00000151612.11381.64180276.563100.464502.923302.36360HepG2PTBP1
ZNF827ENSG00000151612.11484.80040321.040000.594505.864905.02830HepG2PUS1
ZNF827ENSG00000151612.11549.10780299.545800.874209.519408.46110HepG2QKI
ZNF827ENSG00000151612.11516.01310411.126000.327701.904801.45370HepG2RBM22
ZNF827ENSG00000151612.11487.51850307.796400.663405.789805.05290HepG2NELFE
ZNF827ENSG00000151612.11537.37220366.696300.551202.693102.02820HepG2SF3A3
ZNF827ENSG00000151612.11276.98860535.38550-0.950805.730204.74430HepG2SF3B1
ZNF827ENSG00000151612.11220.99140322.13390-0.543702.448301.55100HepG2SMNDC1
ZNF827ENSG00000151612.11607.85710464.335600.388503.166402.64230HepG2SRFBP1
ZNF827ENSG00000151612.11255.39240353.84070-0.470403.196002.45380HepG2SRSF7
ZNF827ENSG00000151612.11398.76540244.512200.705506.636405.84810HepG2SRSF9
ZNF827ENSG00000151612.11658.81450403.125100.708509.334008.49990HepG2SSB
ZNF827ENSG00000151612.11526.17660415.118800.341902.108001.55090HepG2SUCLG1
ZNF827ENSG00000151612.11378.08980270.131400.485002.970402.39200HepG2TAF15
ZNF827ENSG00000151612.11450.06550318.130500.500403.588503.03460HepG2TIAL1
ZNF827ENSG00000151612.11523.08340326.650300.679204.980504.15140HepG2U2AF1
ZNF827ENSG00000151612.11546.82920325.203000.749609.367808.21360HepG2UPF1
ZNF827ENSG00000151612.1127.258500.978304.800205.459204.40280K562PRPF8
ZNF827ENSG00000151612.1119.726600.543205.182404.402503.15920K562SF3B1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF827 is not available on ENCORE database.





1 RBPs can affect the splicing of ZNF827 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNF827ENSG00000151612.11chr4-1466842411466842741466818801466827501466861391466863170.753000.000300.05928includedHepG2DDX55

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNF827 is not avaliable on ENCORE database.