ZNF317

General Information

Gene Name       : ZNF317
Gene ID             : ENSG00000130803.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF317)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF317ENSG00000130803.1420.4822.3721.43ENCSR000AEF
HepG2ZNF317ENSG00000130803.1420.3519.1019.73ENCSR985KAT
K562ZNF317ENSG00000130803.1427.9027.2627.58ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
ZNF317Ribo-STAMP-293TshRNAZNF317-BGRSLV03-61,ZNF317-BGRSLV03-62NT-BGRSLV03-1,NT-BGRSLV03-2,SubmittedENCORE2
ZNF317Ribo-STAMP-293TshRNABGRSDLV02-77,BGRSDLV02-78BGRSDLV02-1,BGRSDLV02-2SubmittedENCORE2
ZNF317Ribo-STAMP-293TshRNAZNF317-BGRSDLV02-79dox,ZNF317-BGRSDLV02-80doxZNF317-BGRSDLV02-77,ZNF317-BGRSDLV02-78,SubmittedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF317 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF317 RNA is bound by 14 proteins.  







eCLIP assay for ZNF317 is not avaliable on ENCORE database.





14 proteins are bound to ZNF317 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1992737199273784+3'-UTR,CDS,intron-Proximal3.439176.98582K562UPF1
chr1992714589271652+3'-UTR,CDS,intron-Distal3.619727.19724K562ZNF800
chr1992715109271564+3'-UTR,CDS,intron-Distal4.0382611.33132K562RBM15
chr1992710859271174+3'-UTR,CDS,intron-Distal4.041146.81238K562ZNF622
chr1992729099272991+3'-UTR,intron-Distal4.612957.83400K562UPF1
chr1992728389272909+3'-UTR,intron-Distal5.7661912.33273K562UPF1
chr1992714469271510+3'-UTR,CDS,intron-Distal3.008814.14326K562RBM15
chr1992730139273071+3'-UTR,intron-Distal5.074827.60978K562UPF1
chr1992737119273782+3'-UTR,CDS,intron-Proximal4.295227.52193K562LIN28B
chr1992718349271909+3'-UTR,CDS,intron-Distal3.437065.39086K562UCHL5
chr1992738589273894+3'-UTR4.012076.85451K562YBX3
chr1992715649271612+3'-UTR,CDS,intron-Distal3.323316.06703K562RBM15
chr1992720029272052+3'-UTR,CDS,intron-Distal4.576625.17013K562RBM15
chr1992716599271691+3'-UTR,CDS,intron-Distal3.152333.07653K562ZNF622
chr1992710759271123+3'-UTR,CDS,intron-Distal4.655886.19943K562RBM15
chr1992709889271003+3'-UTR,CDS,intron-Distal3.345604.49055K562YBX3
chr1992708809270939+3'-UTR,CDS,intron-Distal3.758635.03335K562UCHL5
chr1992725129272535+3'-UTR,intron-Distal4.413854.56348K562UPF1
chr1992708359270890+3'-UTR,CDS,intron-Distal3.929266.37184K562RBM15
chr1992736749273711+3'-UTR,intron-Proximal3.855473.47885K562LIN28B
chr1992734379273496+3'-UTR,intron-Distal4.897897.23707K562RBM15
chr1992735099273572+3'-UTR,intron-Distal4.345138.85903K562RBM15
chr1992715649271710+3'-UTR,CDS,intron-Distal3.178515.18023HepG2GRWD1
chr1992686959268802+3'-UTR,CDS,intron-Distal,intron-Proximal3.607285.95351HepG2PRPF8
chr1992712539271278+3'-UTR,CDS,intron-Distal3.144083.34231K562RBM15
chr1992733589273388+3'-UTR,intron-Distal3.641694.82552K562UPF1
chr1992731009273155+3'-UTR,intron-Distal3.637235.65632K562UPF1
chr1992731959273264+3'-UTR,intron-Distal3.490026.79943K562RBM15
chr1992738949273919+3'-UTR3.983775.55970K562YBX3
chr1992728889272934+3'-UTR,intron-Distal4.411015.17013K562RBM15
chr1992719099271971+3'-UTR,CDS,intron-Distal4.909846.73676K562UCHL5
chr1992724999272543+3'-UTR,intron-Distal4.428105.01312K562UCHL5
chr1992717759271817+3'-UTR,CDS,intron-Distal4.729046.54449K562RBM15
chr1992711699271261+3'-UTR,CDS,intron-Distal4.937065.86954K562UCHL5
chr1992711709271214+3'-UTR,CDS,intron-Distal3.209705.40646K562RBM15
chr1992512449251330+5'-UTR,intron-Proximal3.870313.86479HepG2PRPF8
chr1992512459251402+5'-UTR,intron-Distal,intron-Proximal3.181906.32696K562PRPF8
chr1992549959255054+intron-Distal3.910713.24603K562KHSRP
chr1992681019268174+intron-Distal,intron-Proximal3.879586.42898K562AQR
chr1992681259268176+intron-Distal,intron-Proximal3.288113.47285K562PRPF8
chr1992667179266763+intron-Distal,intron-Proximal4.560864.09264K562AQR
chr1992550569255134+intron-Distal4.498325.41654K562KHSRP
chr1992563309256426+intron-Distal3.846023.16028HepG2SUGP2
chr1992530069253061+intron-Distal3.460943.10641K562HNRNPM
chr1992512819251397+intron-Distal,intron-Proximal4.888646.91512HepG2TIAL1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF317 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF317 is not available on ENCORE database.

  • 44 RBPs can affect the levels of ZNF317.  








The Knockdown/knockout RNA-Seq assay for ZNF317 is not available on ENCORE database.





44 RBPs can affect the gene expression of ZNF317 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF317ENSG00000130803.10515.62080732.63040-0.506803.481702.60130HepG2ASCC1
ZNF317ENSG00000130803.10657.57080966.22340-0.555203.625802.49490HepG2CCAR1
ZNF317ENSG00000130803.10849.55920648.189400.390204.538803.72730HepG2CKAP4
ZNF317ENSG00000130803.10412.48530643.02120-0.640505.368304.44040HepG2CPSF6
ZNF317ENSG00000130803.10753.11360599.617900.328703.266102.36720HepG2DDX19B
ZNF317ENSG00000130803.10519.42050700.41390-0.431302.593202.01890HepG2EIF2S1
ZNF317ENSG00000130803.10547.76950728.93560-0.412202.288201.70280HepG2GPKOW
ZNF317ENSG00000130803.101001.17890837.089800.258102.034801.37820HepG2NOL12
ZNF317ENSG00000130803.10923.66350751.005700.298402.715601.94790HepG2PRPF4
ZNF317ENSG00000130803.10610.22960799.09430-0.389002.741202.14710HepG2PUF60
ZNF317ENSG00000130803.10998.91400848.296000.235702.452401.88690HepG2PUM1
ZNF317ENSG00000130803.101026.60400847.662600.276202.155401.56060HepG2PUM2
ZNF317ENSG00000130803.101141.81910941.983900.277502.319501.83400HepG2RBM22
ZNF317ENSG00000130803.101412.84190896.029000.656907.957306.89140HepG2RPLP0
ZNF317ENSG00000130803.10602.23660474.881300.342702.078101.53890HepG2RPS19
ZNF317ENSG00000130803.101547.93660952.519000.700405.681504.69510HepG2SF3A3
ZNF317ENSG00000130803.101041.89620688.553100.597505.945704.94410HepG2SF3B1
ZNF317ENSG00000130803.101696.460501063.916700.6730016.1618015.21400HepG2SRFBP1
ZNF317ENSG00000130803.10459.85520706.28060-0.619106.848306.03500HepG2TAF15
ZNF317ENSG00000130803.101615.54720754.705201.0979018.7196017.03030HepG2U2AF1
ZNF317ENSG00000130803.101052.62480815.561700.368004.188303.47530HepG2UTP3
ZNF317ENSG00000130803.101511.113901289.593700.228602.304401.77820K562AGGF1
ZNF317ENSG00000130803.105104.315601689.521401.5950055.5335053.23790K562AQR
ZNF317ENSG00000130803.101658.688201407.967500.236302.220701.41080K562ATP5C1
ZNF317ENSG00000130803.10838.232901126.61620-0.426603.243502.29710K562BOP1
ZNF317ENSG00000130803.10971.890201197.87270-0.301602.317801.59330K562CPSF6
ZNF317ENSG00000130803.101708.108001443.939200.242302.476501.65400K562DKC1
ZNF317ENSG00000130803.10973.47310771.863200.334703.130002.28510K562EIF3G
ZNF317ENSG00000130803.101594.66250938.569500.7646011.584809.87080K562EIF4A3
ZNF317ENSG00000130803.101459.74790976.073200.580609.854208.79420K562FXR1
ZNF317ENSG00000130803.101483.072002002.33640-0.433104.205703.23060K562HSPD1
ZNF317ENSG00000130803.101313.645101043.911100.331502.864102.00750K562MAGOH
ZNF317ENSG00000130803.101970.006001595.310100.304302.911501.97270K562MBNL1
ZNF317ENSG00000130803.101508.793501118.198100.432102.687501.81970K562NAA15
ZNF317ENSG00000130803.103070.850302414.336100.346903.279201.63990K562NOL12
ZNF317ENSG00000130803.101239.78990928.849000.416503.704002.57390K562PCBP2
ZNF317ENSG00000130803.101284.35470993.880300.369802.682901.94450K562PRPF8
ZNF317ENSG00000130803.101325.350601014.214100.385903.818303.04940K562PTBP1
ZNF317ENSG00000130803.103258.914702408.250200.436304.784503.71460K562PUF60
ZNF317ENSG00000130803.101658.988501330.753200.318002.146601.65620K562PUS1
ZNF317ENSG00000130803.101532.410901296.641900.240902.146601.61210K562RBM15
ZNF317ENSG00000130803.101292.14830972.589900.409803.598602.62910K562RBM22
ZNF317ENSG00000130803.102082.194501551.444800.424406.536405.32900K562SF3A3
ZNF317ENSG00000130803.101089.53710777.441200.486804.597203.48470K562SF3B4
ZNF317ENSG00000130803.101887.560701203.980200.648602.694001.48590K562SNRNP200
ZNF317ENSG00000130803.101681.740501406.060100.258202.250701.50880K562SYNCRIP
ZNF317ENSG00000130803.101328.037001006.282800.400203.203102.44250K562TARDBP
ZNF317ENSG00000130803.101271.79600724.624700.811508.866906.72690K562U2AF1
ZNF317ENSG00000130803.101313.38510748.583700.8110014.3340012.48790K562U2AF2
ZNF317ENSG00000130803.101745.272301483.421700.234402.835301.97890K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF317 is not available on ENCORE database.





13 RBPs can affect the splicing of ZNF317 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNF317ENSG00000130803.10chr19+926865592687519267943926807092695019269584-0.607000.000000.00000excludedK562SRSF1
SEZNF317ENSG00000130803.10chr19+926865592687519267943926807092695019269584-0.259000.000790.01726excludedK562SF3B4
SEZNF317ENSG00000130803.10chr19+926865592687519267943926807092695019269584-0.429000.000000.00001excludedK562PRPF8
SEZNF317ENSG00000130803.10chr19+926850992687519267943926807092695019269584-0.358000.001160.08520excludedK562XRCC6
SEZNF317ENSG00000130803.10chr19+926865592687519267943926807092695019269584-0.287000.000000.00003excludedK562AQR
SEZNF317ENSG00000130803.10chr19+926865592687519267943926807092695019269584-0.270000.000120.00774excludedK562PTBP1
RIZNF317ENSG00000130803.10chr19+926728792680709267287926742492679439268070-0.152000.000750.03593excludedHepG2AKAP1
RIZNF317ENSG00000130803.10chr19+9267287926807092672879267424926794392680700.306000.000010.00008includedK562PUS1
RIZNF317ENSG00000130803.10chr19+9267287926807092672879267424926794392680700.180000.005790.05666includedHepG2QKI
RIZNF317ENSG00000130803.10chr19+9267287926807092672879267424926794392680700.277000.000610.03387includedK562BUD13
RIZNF317ENSG00000130803.10chr19+9267287926807092672879267424926794392680700.387000.000000.00016includedK562U2AF1
RIZNF317ENSG00000130803.10chr19+9267287926807092672879267424926794392680700.500000.000000.00000includedK562U2AF2
RIZNF317ENSG00000130803.10chr19+9267287926807092672879267424926794392680700.206000.000640.00996includedK562UTP18
RIZNF317ENSG00000130803.10chr19+9267287926807092672879267424926794392680700.284000.000000.00000includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNF317 is not avaliable on ENCORE database.