TBC1D15

General Information

Gene Name : TBC1D15
Gene ID : ENSG00000121749.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TBC1D15)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TBC1D15	ENSG00000121749.15	24.91	21.16	23.04	ENCSR000AEF
HepG2	TBC1D15	ENSG00000121749.15	8.34	13.90	11.12	ENCSR985KAT
K562	TBC1D15	ENSG00000121749.15	27.73	25.77	26.75	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TBC1D15 is not avaliable on ENCORE database.

Proteins bound to RNA

TBC1D15 RNA is bound by 12 proteins.

eCLIP assay for TBC1D15 is not avaliable on ENCORE database.

12 proteins are bound to TBC1D15 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	72278730	72278809	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.62407	5.03746	HepG2	BCLAF1
chr12	72300801	72300825	+	3'-UTR,CDS,intron-Proximal	3.40962	3.07653	K562	ZNF622
chr12	72266704	72266752	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.46159	3.27569	HepG2	BCLAF1
chr12	72266679	72266782	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.84024	12.74482	K562	BUD13
chr12	72288615	72288663	+	3'-UTR,CDS	3.10805	3.84692	K562	UCHL5
chr12	72265849	72265950	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.56858	9.53772	K562	UCHL5
chr12	72289726	72289829	+	3'-UTR,CDS,intron-Proximal	3.62101	12.72345	K562	UCHL5
chr12	72289727	72289798	+	3'-UTR,CDS	3.46387	6.28780	K562	DDX24
chr12	72266707	72266756	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.18547	7.08726	K562	ZNF622
chr12	72314507	72314545	+	3'-UTR,CDS,intron-Proximal	3.27243	3.50696	K562	BUD13
chr12	72289776	72289833	+	3'-UTR,CDS	4.06613	4.24220	K562	ZNF622
chr12	72300799	72300904	+	3'-UTR,CDS,intron-Proximal	3.29539	3.46047	K562	GRWD1
chr12	72266708	72266758	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.50602	8.10543	K562	UCHL5
chr12	72287004	72287093	+	3'-UTR,CDS	5.28087	9.46752	K562	ZNF622
chr12	72274303	72274369	+	3'-UTR,5'-UTR,CDS,intron-Distal	3.70232	5.08388	K562	UCHL5
chr12	72311479	72311515	+	3'-UTR,CDS	3.78418	4.79276	K562	ZNF622
chr12	72291686	72291721	+	3'-UTR,CDS	3.02358	4.34780	K562	ZNF622
chr12	72266756	72266781	+	3'-UTR,5'-UTR,CDS	3.02240	4.14618	K562	ZNF622
chr12	72265918	72265949	+	3'-UTR,5'-UTR,CDS,intron-Proximal	5.16325	5.10740	K562	DDX24
chr12	72289725	72289745	+	3'-UTR,CDS,intron-Proximal	3.03316	6.62050	K562	ZNF622
chr12	72255191	72255251	+	5'-UTR,CDS,intron-Distal	5.26039	9.35180	K562	EXOSC5
chr12	72234874	72234914	+	5'-UTR,intron-Distal,intron-Proximal	4.01499	3.30687	K562	EXOSC5
chr12	72233550	72233591	+	5'-UTR,CDS	4.30211	4.10264	K562	ZNF622
chr12	72233557	72233591	+	5'-UTR,CDS	4.26431	4.16170	K562	UCHL5
chr12	72300976	72301086	+	intron-Distal,intron-Proximal	3.66070	4.76426	K562	PRPF8
chr12	72234242	72234308	+	intron-Distal	3.56669	5.34991	K562	HNRNPM
chr12	72256523	72256596	+	intron-Distal	3.69406	3.02234	K562	KHSRP
chr12	72237799	72237969	+	intron-Distal	3.39675	3.18966	K562	MATR3
chr12	72309631	72309789	+	intron-Distal	3.54428	4.72639	K562	KHSRP
chr12	72253717	72253772	+	intron-Distal	3.81274	5.50856	K562	EXOSC5
chr12	72255029	72255068	+	intron-Distal	4.46579	4.80466	K562	EXOSC5
chr12	72255358	72255409	+	intron-Distal,intron-Proximal	4.95725	6.08869	K562	EXOSC5
chr12	72278853	72278990	+	intron-Distal,intron-Proximal	3.93023	3.89294	K562	KHSRP
chr12	72271315	72271376	+	intron-Distal	4.04086	3.09122	HepG2	PTBP1
chr12	72234554	72234679	+	intron-Distal	3.69422	7.26545	K562	EXOSC5
chr12	72290261	72290325	+	intron-Distal	3.89656	3.45805	K562	KHSRP
chr12	72312362	72312462	+	intron-Distal,intron-Proximal	3.88126	3.92684	K562	KHSRP
chr12	72235399	72235554	+	intron-Distal	3.39803	3.45178	K562	MATR3
chr12	72255864	72255910	+	intron-Distal	4.96046	7.38693	K562	EXOSC5
chr12	72306288	72306363	+	intron-Distal	3.29950	3.43829	K562	EXOSC5
chr12	72254198	72254227	+	intron-Distal	4.42206	4.48560	K562	EXOSC5
chr12	72234097	72234173	+	intron-Distal	5.68684	12.35351	K562	HNRNPM
chr12	72254431	72254459	+	intron-Distal	4.45725	4.48560	K562	EXOSC5
chr12	72234099	72234205	+	intron-Distal	4.66314	4.66899	HepG2	HNRNPM
chr12	72265987	72266050	+	intron-Distal,intron-Proximal	4.05215	3.00996	K562	BUD13
chr12	72271314	72271393	+	intron-Distal	5.42253	6.95895	K562	PTBP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for TBC1D15 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TBC1D15 is not available on ENCORE database.
50 RBPs can affect the levels of TBC1D15.

The Knockdown/knockout RNA-Seq assay for TBC1D15 is not available on ENCORE database.

50 RBPs can affect the gene expression of TBC1D15 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TBC1D15	ENSG00000121749.11	409.25340	507.38070	-0.31010	2.02510	1.49000	HepG2	ACO1
TBC1D15	ENSG00000121749.11	913.32160	732.95100	0.31730	3.14290	2.41760	HepG2	AUH
TBC1D15	ENSG00000121749.11	405.72910	537.87800	-0.40680	2.23710	1.61020	HepG2	CPSF6
TBC1D15	ENSG00000121749.11	419.60650	550.84830	-0.39260	2.07200	1.55090	HepG2	EIF2S1
TBC1D15	ENSG00000121749.11	250.94280	365.44130	-0.54230	2.55620	1.68300	HepG2	EIF3D
TBC1D15	ENSG00000121749.11	464.90570	614.29790	-0.40200	2.28080	1.65010	HepG2	FXR1
TBC1D15	ENSG00000121749.11	234.72380	401.48430	-0.77440	5.66220	4.78120	HepG2	HNRNPA1
TBC1D15	ENSG00000121749.11	449.47320	577.12260	-0.36060	1.92640	1.33790	HepG2	HNRNPK
TBC1D15	ENSG00000121749.11	440.76390	581.89850	-0.40080	2.15930	1.59670	HepG2	HNRNPLL
TBC1D15	ENSG00000121749.11	398.81060	579.14130	-0.53820	3.52460	2.77230	HepG2	IGF2BP2
TBC1D15	ENSG00000121749.11	471.45080	632.46710	-0.42390	2.37210	1.78330	HepG2	NCBP2
TBC1D15	ENSG00000121749.11	432.66790	591.01540	-0.44990	3.19570	2.56180	HepG2	PUF60
TBC1D15	ENSG00000121749.11	779.46720	626.92540	0.31410	2.11760	1.52700	HepG2	PUM2
TBC1D15	ENSG00000121749.11	425.57860	516.79390	-0.28020	1.83680	1.31310	HepG2	PUS1
TBC1D15	ENSG00000121749.11	743.04920	509.22120	0.54510	2.42220	1.75980	HepG2	RAVER1
TBC1D15	ENSG00000121749.11	871.57410	708.89550	0.29800	2.39000	1.58680	HepG2	RBM15
TBC1D15	ENSG00000121749.11	654.91230	524.40620	0.32050	1.91060	1.33100	HepG2	RPLP0
TBC1D15	ENSG00000121749.11	249.51830	355.57190	-0.51100	2.78940	2.17190	HepG2	RPS19
TBC1D15	ENSG00000121749.11	483.46170	698.53720	-0.53090	3.01610	2.18180	HepG2	RPS3A
TBC1D15	ENSG00000121749.11	557.45060	395.06910	0.49660	4.89150	4.07570	HepG2	SAFB2
TBC1D15	ENSG00000121749.11	1191.44080	640.87420	0.89450	2.90420	2.10180	HepG2	SNRNP70
TBC1D15	ENSG00000121749.11	1210.08440	794.40030	0.60710	11.24740	10.42170	HepG2	SRFBP1
TBC1D15	ENSG00000121749.11	972.69820	609.16350	0.67510	10.77630	9.97530	HepG2	SRSF1
TBC1D15	ENSG00000121749.11	1002.44950	619.71010	0.69380	5.40060	3.96200	HepG2	SRSF3
TBC1D15	ENSG00000121749.11	710.51540	547.61910	0.37560	3.14760	2.55450	HepG2	TAF15
TBC1D15	ENSG00000121749.11	672.27890	503.10330	0.41810	2.82100	1.97740	HepG2	TIA1
TBC1D15	ENSG00000121749.11	338.16460	431.04060	-0.35010	1.93960	1.50530	HepG2	TIAL1
TBC1D15	ENSG00000121749.11	304.83790	434.92690	-0.51270	4.24920	3.57960	HepG2	TRIM56
TBC1D15	ENSG00000121749.11	852.57000	529.01540	0.68840	4.96760	4.13950	HepG2	U2AF1
TBC1D15	ENSG00000121749.11	390.88320	539.59090	-0.46510	4.19900	3.36760	HepG2	UPF1
TBC1D15	ENSG00000121749.11	378.83430	520.95170	-0.45960	3.71440	3.03600	HepG2	UTP3
TBC1D15	ENSG00000121749.11	597.34050	459.31290	0.37900	3.28660	2.56560	HepG2	ZC3H8
TBC1D15	ENSG00000121749.11	3764.30450	2837.44680	0.40770	5.60780	4.21700	K562	CELF1
TBC1D15	ENSG00000121749.11	1013.31610	1246.46200	-0.29880	2.31270	1.36340	K562	DDX3X
TBC1D15	ENSG00000121749.11	836.82600	1101.66580	-0.39670	4.40600	3.52610	K562	EIF2S2
TBC1D15	ENSG00000121749.11	520.98360	892.26100	-0.77620	7.06510	5.29790	K562	EIF3D
TBC1D15	ENSG00000121749.11	807.87390	1206.09250	-0.57810	8.22110	6.85380	K562	EIF3G
TBC1D15	ENSG00000121749.11	890.19060	1354.31060	-0.60540	10.04610	8.97740	K562	FXR1
TBC1D15	ENSG00000121749.11	2411.79400	1557.07980	0.63120	3.14450	2.38220	K562	G3BP2
TBC1D15	ENSG00000121749.11	1223.41590	1468.12350	-0.26310	2.00040	1.35220	K562	GRSF1
TBC1D15	ENSG00000121749.11	3251.78860	2648.44290	0.29600	2.84710	2.00840	K562	KIF1C
TBC1D15	ENSG00000121749.11	2879.07980	2079.61350	0.46920	3.48920	2.47240	K562	NAA15
TBC1D15	ENSG00000121749.11	1825.76050	1349.85200	0.43560	3.48530	2.55150	K562	PCBP3
TBC1D15	ENSG00000121749.11	1307.93440	1035.39040	0.33700	3.08570	2.23770	K562	POLR2G
TBC1D15	ENSG00000121749.11	929.92010	1535.67660	-0.72370	12.05020	10.71620	K562	PTBP1
TBC1D15	ENSG00000121749.11	2228.86240	2623.64920	-0.23530	2.76220	1.80390	K562	PUM2
TBC1D15	ENSG00000121749.11	3174.15100	2474.85600	0.35890	3.14270	2.57070	K562	PUS1
TBC1D15	ENSG00000121749.11	2197.55950	1485.71000	0.56460	3.28970	1.71770	K562	RAVER1
TBC1D15	ENSG00000121749.11	1069.41920	1472.80230	-0.46170	4.54650	3.43800	K562	RBM22
TBC1D15	ENSG00000121749.11	665.57760	844.69050	-0.34380	2.51370	1.57210	K562	RCC2
TBC1D15	ENSG00000121749.11	1923.27780	1478.77500	0.37910	2.51270	1.61510	K562	SRPK2
TBC1D15	ENSG00000121749.11	1333.25620	1053.23530	0.34000	2.51800	1.40440	K562	SRSF7
TBC1D15	ENSG00000121749.11	1497.85390	1178.53380	0.34580	3.49880	1.77480	K562	SRSF9
TBC1D15	ENSG00000121749.11	1203.64600	1523.70280	-0.34020	2.51860	1.84130	K562	TARDBP
TBC1D15	ENSG00000121749.11	2200.77490	1559.03980	0.49730	7.38390	6.07830	K562	U2AF2
TBC1D15	ENSG00000121749.11	2950.69700	2210.77530	0.41640	4.79640	3.61360	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TBC1D15 is not available on ENCORE database.

13 RBPs can affect the splicing of TBC1D15 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TBC1D15	ENSG00000121749.11	chr12	+	72248342	72248382			72233538	72233591	72265849	72265948	0.05200	0.00106	0.02191	included	K562	SRSF1
SE	TBC1D15	ENSG00000121749.11	chr12	+	72274248	72274387			72266708	72266783	72278590	72278801	-0.07300	0.00169	0.03222	excluded	K562	SF3B4
SE	TBC1D15	ENSG00000121749.11	chr12	+	72248342	72248382			72233538	72233591	72265849	72265948	0.12300	0.00000	0.00006	included	K562	MATR3
SE	TBC1D15	ENSG00000121749.11	chr12	+	72301642	72301769			72300801	72300918	72307605	72307706	0.06200	0.00071	0.00914	included	K562	AQR
SE	TBC1D15	ENSG00000121749.11	chr12	+	72312201	72312328			72311477	72311577	72314510	72314627	-0.09300	0.00155	0.01764	excluded	K562	AQR
SE	TBC1D15	ENSG00000121749.11	chr12	+	72266708	72266783			72265769	72265948	72287001	72287199	-0.08400	0.00008	0.00136	excluded	K562	AQR
SE	TBC1D15	ENSG00000121749.11	chr12	+	72248342	72248382			72233538	72233591	72265849	72265948	0.09200	0.00027	0.01380	included	K562	FXR1
SE	TBC1D15	ENSG00000121749.11	chr12	+	72274248	72274387			72266708	72266783	72278590	72278801	-0.05600	0.00042	0.06441	excluded	K562	LARP4
SE	TBC1D15	ENSG00000121749.11	chr12	+	72255184	72255276			72233538	72233591	72265849	72265948	0.20200	0.00014	0.02665	included	K562	HNRNPM
SE	TBC1D15	ENSG00000121749.11	chr12	+	72301642	72301769			72300801	72300918	72307605	72307706	0.13400	0.00038	0.04619	included	HepG2	LARP4
SE	TBC1D15	ENSG00000121749.11	chr12	+	72234880	72235011			72233538	72233591	72265849	72265948	-0.10200	0.00021	0.00725	excluded	HepG2	SRSF1
SE	TBC1D15	ENSG00000121749.11	chr12	+	72301642	72301769			72300801	72300918	72307605	72307706	-0.05900	0.00019	0.00638	excluded	HepG2	SRSF1
SE	TBC1D15	ENSG00000121749.11	chr12	+	72274248	72274387			72266708	72266783	72278590	72278801	-0.06500	0.00003	0.00201	excluded	K562	UTP18
SE	TBC1D15	ENSG00000121749.11	chr12	+	72248564	72248633			72233538	72233591	72265849	72265948	0.05300	0.00057	0.02607	included	K562	PTBP1
A3SS	TBC1D15	ENSG00000121749.11	chr12	+	72291596	72291721			72291626	72291721	72290367	72290560	0.08200	0.00000	0.00001	longer	K562	AQR
A3SS	TBC1D15	ENSG00000121749.11	chr12	+	72307580	72307706			72307605	72307706	72300801	72300918	0.10500	0.00000	0.00000	longer	K562	AQR
A3SS	TBC1D15	ENSG00000121749.11	chr12	+	72314492	72314627			72314510	72314627	72312195	72312328	0.14200	0.00000	0.00000	longer	K562	AQR
A3SS	TBC1D15	ENSG00000121749.11	chr12	+	72266688	72266783			72266708	72266783	72265804	72265948	0.08000	0.00000	0.00002	longer	K562	AQR
A5SS	TBC1D15	ENSG00000121749.11	chr12	+	72287001	72287199			72287001	72287104	72288465	72288663	0.07900	0.00000	0.00000	longer	K562	AQR
MXE	TBC1D15	ENSG00000121749.11	chr12	+	72266688	72266783	72274248	72274387	72265849	72265948	72278590	72278801	0.05500	0.00068	0.02429	1included	K562	RBM15
MXE	TBC1D15	ENSG00000121749.11	chr12	+	72266708	72266783	72274248	72274387	72265849	72265948	72278590	72278801	-0.21600	0.00019	0.01380	2included	K562	SF3B1
MXE	TBC1D15	ENSG00000121749.11	chr12	+	72291596	72291721	72300769	72300918	72290367	72290560	72307605	72307706	0.09300	0.00000	0.00001	1included	K562	AQR
MXE	TBC1D15	ENSG00000121749.11	chr12	+	72312201	72312328	72314510	72314627	72311477	72311577	72315147	72315234	0.06400	0.00814	0.05358	1included	K562	AQR
MXE	TBC1D15	ENSG00000121749.11	chr12	+	72312201	72312328	72314492	72314627	72311477	72311577	72315147	72315234	0.06500	0.00758	0.05059	1included	K562	AQR
MXE	TBC1D15	ENSG00000121749.11	chr12	+	72266688	72266783	72274214	72274387	72265804	72265948	72287001	72287104	0.50600	0.00009	0.00113	1included	K562	AQR
MXE	TBC1D15	ENSG00000121749.11	chr12	+	72266688	72266783	72274214	72274387	72265804	72265948	72278590	72278801	0.15000	0.00000	0.00005	1included	K562	AQR
MXE	TBC1D15	ENSG00000121749.11	chr12	+	72287001	72287104	72288465	72288663	72265849	72265948	72289726	72289855	0.05200	0.00003	0.00041	1included	K562	AQR
MXE	TBC1D15	ENSG00000121749.11	chr12	+	72266591	72266783	72274214	72274387	72265804	72265948	72287001	72287104	0.41900	0.00122	0.01086	1included	K562	AQR
MXE	TBC1D15	ENSG00000121749.11	chr12	+	72266591	72266783	72274214	72274387	72265804	72265948	72278590	72278801	0.05900	0.00814	0.05360	1included	K562	AQR
MXE	TBC1D15	ENSG00000121749.11	chr12	+	72274248	72274387	72278590	72278801	72265849	72265948	72287001	72287104	0.13300	0.00555	0.03931	1included	K562	AQR
MXE	TBC1D15	ENSG00000121749.11	chr12	+	72278590	72278677	72287001	72287104	72274248	72274387	72289726	72289855	-0.06200	0.01254	0.07609	2included	K562	AQR
MXE	TBC1D15	ENSG00000121749.11	chr12	+	72314510	72314627	72315147	72315234	72312230	72312328	72316762	72316995	-0.10600	0.00618	0.04301	2included	K562	AQR
MXE	TBC1D15	ENSG00000121749.11	chr12	+	72314510	72314627	72315147	72315276	72312230	72312328	72316762	72316995	-0.05100	0.00103	0.00935	2included	K562	AQR
MXE	TBC1D15	ENSG00000121749.11	chr12	+	72274248	72274387	72278590	72278801	72266708	72266783	72287001	72287104	0.10900	0.00185	0.04794	1included	K562	SBDS
MXE	TBC1D15	ENSG00000121749.11	chr12	+	72274248	72274387	72278590	72278801	72266708	72266783	72287001	72287104	0.10300	0.00534	0.08828	1included	K562	PPIL4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TBC1D15

General Information

Functions

Localization

Domains (AlphaFold: TBC1D15)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TBC1D15 is not avaliable on ENCORE database.

12 proteins are bound to TBC1D15 RNA:

eCLIP assay for TBC1D15 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TBC1D15 is not available on ENCORE database.

50 RBPs can affect the gene expression of TBC1D15 :

The Knockdown/knockout RNA-Seq assay for TBC1D15 is not available on ENCORE database.

13 RBPs can affect the splicing of TBC1D15 :

The Knockdown/knockout RNA-Seq assay for TBC1D15 is not avaliable on ENCORE database.