TAF5L

General Information

Gene Name       : TAF5L
Gene ID             : ENSG00000135801.9
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: TAF5L)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TAF5LENSG00000135801.913.5117.7315.62ENCSR000AEF
HepG2TAF5LENSG00000135801.911.9313.7512.84ENCSR985KAT
K562TAF5LENSG00000135801.923.4922.6023.05ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TAF5L is not avaliable on ENCORE database.



Proteins bound to RNA
  • TAF5L RNA is bound by 5 proteins.  







eCLIP assay for TAF5L is not avaliable on ENCORE database.





5 proteins are bound to TAF5L RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1229750041229750126-CDS,intron-Distal,intron-Proximal4.879545.68502HepG2PRPF8
chr1229738548229738616-CDS,intron-Distal3.418423.34065K562IGF2BP1
chr1229750026229750098-CDS,intron-Distal,intron-Proximal4.384433.85435K562PRPF8
chr1229761252229761332-intron-Distal4.829205.24810K562GTF2F1
chr1229761391229761478-intron-Distal4.606894.46189K562GTF2F1
chr1229761395229761482-intron-Distal5.071475.15564HepG2FAM120A
chr1229761261229761338-intron-Distal4.242444.10339HepG2CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TAF5L is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TAF5L is not available on ENCORE database.

  • 74 RBPs can affect the levels of TAF5L.  








The Knockdown/knockout RNA-Seq assay for TAF5L is not available on ENCORE database.





74 RBPs can affect the gene expression of TAF5L :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TAF5LENSG00000135801.5724.92300320.627401.1768012.0590011.02650HepG2AKAP1
TAF5LENSG00000135801.5458.03160563.43070-0.298802.023701.41920HepG2AUH
TAF5LENSG00000135801.5348.34110451.60440-0.374601.895801.39220HepG2BOP1
TAF5LENSG00000135801.5352.68740252.045300.484602.327801.61320HepG2CIRBP
TAF5LENSG00000135801.5436.55770314.571300.472703.847303.08760HepG2CKAP4
TAF5LENSG00000135801.5275.27360414.60140-0.590903.506602.74180HepG2CPSF6
TAF5LENSG00000135801.5574.63280426.395400.430303.465702.76350HepG2CELF1
TAF5LENSG00000135801.5317.78610458.51300-0.528904.932603.98340HepG2DAZAP1
TAF5LENSG00000135801.5374.46010266.348300.491402.318501.47280HepG2EEF2
TAF5LENSG00000135801.5346.97030216.219500.682203.969502.89700HepG2EIF3D
TAF5LENSG00000135801.5567.03340280.289601.016409.260308.09940HepG2EIF4A3
TAF5LENSG00000135801.5592.79610272.905801.119009.067807.86100HepG2EIF4B
TAF5LENSG00000135801.5770.17950646.903200.251501.924801.40410HepG2ETF1
TAF5LENSG00000135801.5475.51460282.807600.749605.327604.38820HepG2FXR1
TAF5LENSG00000135801.5395.71820262.341800.592903.352502.62460HepG2G3BP1
TAF5LENSG00000135801.5431.99400278.514300.633204.016902.93600HepG2G3BP2
TAF5LENSG00000135801.5349.62510469.99380-0.426802.026401.47320HepG2GPKOW
TAF5LENSG00000135801.5413.56030587.05700-0.505405.224804.27820HepG2HNRNPF
TAF5LENSG00000135801.5252.90790448.52280-0.826606.113705.21820HepG2HNRNPLL
TAF5LENSG00000135801.5382.45180578.07820-0.596005.717504.71350HepG2IGF2BP1
TAF5LENSG00000135801.5439.00720266.663400.719104.838903.96820HepG2IGF2BP2
TAF5LENSG00000135801.5454.12510250.257400.859602.773801.79080HepG2IGF2BP3
TAF5LENSG00000135801.5517.33920282.906300.870707.160206.12110HepG2MAGOH
TAF5LENSG00000135801.5496.68520284.488600.803905.577504.70700HepG2MATR3
TAF5LENSG00000135801.5409.83440226.296100.856702.338901.36970HepG2METAP2
TAF5LENSG00000135801.5450.99610291.189000.631103.867703.12390HepG2NCBP2
TAF5LENSG00000135801.5234.55010397.69340-0.761804.905803.92030HepG2NSUN2
TAF5LENSG00000135801.5465.77620261.412300.833209.341708.33430HepG2PCBP1
TAF5LENSG00000135801.5297.50310399.82910-0.426502.803602.02590HepG2PRPF4
TAF5LENSG00000135801.5386.23760265.989700.538003.615803.00830HepG2PTBP1
TAF5LENSG00000135801.5617.63300460.701800.422804.151803.45700HepG2PUM1
TAF5LENSG00000135801.5510.32200296.026900.785607.963207.12950HepG2NELFE
TAF5LENSG00000135801.5421.58920275.698200.612604.832004.04740HepG2RECQL
TAF5LENSG00000135801.5458.22710632.48460-0.465003.580602.82060HepG2RPLP0
TAF5LENSG00000135801.5316.80750210.388000.590503.397502.72480HepG2RPS19
TAF5LENSG00000135801.5292.95310211.162100.472202.141301.31210HepG2SERBP1
TAF5LENSG00000135801.5663.79810384.809600.786505.722604.73150HepG2SF3A3
TAF5LENSG00000135801.5388.38420276.942300.487803.099902.47850HepG2SF3B4
TAF5LENSG00000135801.5247.98210493.97570-0.994206.316705.12380HepG2SNRNP70
TAF5LENSG00000135801.5825.51040289.062601.5138021.4783020.42420HepG2SRSF1
TAF5LENSG00000135801.5686.58270477.679600.523302.943301.90640HepG2SRSF3
TAF5LENSG00000135801.5546.71370428.501100.351402.471601.87530HepG2SRSF5
TAF5LENSG00000135801.5443.66390576.78270-0.378603.287502.53760HepG2SRSF7
TAF5LENSG00000135801.5617.21330487.334900.340802.551701.95040HepG2SUCLG1
TAF5LENSG00000135801.5580.37040374.969700.630104.755403.94470HepG2U2AF1
TAF5LENSG00000135801.5586.74620329.479700.8324010.871309.81150HepG2UTP3
TAF5LENSG00000135801.5139.87660214.34740-0.615802.476901.44800HepG2XPO5
TAF5LENSG00000135801.51722.129601051.120300.7122017.1662015.87560K562AGGF1
TAF5LENSG00000135801.51600.535901093.745700.549206.594505.55320K562AKAP8L
TAF5LENSG00000135801.51771.517501400.403900.339002.723801.49250K562APOBEC3C
TAF5LENSG00000135801.51649.603401345.119400.294301.888301.38610K562AQR
TAF5LENSG00000135801.5690.047101026.51990-0.573006.618805.40070K562CPSF6
TAF5LENSG00000135801.52412.571201951.318400.306003.281702.21880K562CELF1
TAF5LENSG00000135801.51737.388101262.618600.460407.717106.70400K562DDX47
TAF5LENSG00000135801.51420.532701176.902800.271302.818701.93580K562DKC1
TAF5LENSG00000135801.5930.22220677.627000.457002.754901.47880K562EEF2
TAF5LENSG00000135801.51109.03310701.011400.661705.804804.22930K562EIF3D
TAF5LENSG00000135801.5959.48950628.262100.610808.619207.21810K562EIF3G
TAF5LENSG00000135801.52044.410001587.058100.365205.098203.84260K562EIF4G2
TAF5LENSG00000135801.51139.72800772.189800.561608.227407.25350K562FXR1
TAF5LENSG00000135801.51034.50730754.430700.455402.321301.68160K562G3BP2
TAF5LENSG00000135801.51122.32650893.523400.328803.058501.85790K562GLRX3
TAF5LENSG00000135801.5770.74410980.06260-0.346602.507201.74850K562GPKOW
TAF5LENSG00000135801.51284.629501603.58280-0.319902.770402.01410K562GRSF1
TAF5LENSG00000135801.51528.95230991.155500.625302.620301.44580K562HNRNPA2B1
TAF5LENSG00000135801.51430.22840951.330000.588105.379104.02740K562HNRNPM
TAF5LENSG00000135801.51151.80210953.172800.273002.344901.52190K562HNRNPU
TAF5LENSG00000135801.51626.471901160.711800.486602.970802.11430K562KIF1C
TAF5LENSG00000135801.51413.332101111.107700.347002.606201.57250K562MAK16
TAF5LENSG00000135801.51480.00730911.414200.699303.159602.20520K562NAA15
TAF5LENSG00000135801.52207.830401735.940900.346803.136001.53750K562NOL12
TAF5LENSG00000135801.51105.40150637.119900.794809.365607.98240K562PRPF8
TAF5LENSG00000135801.5529.67250705.41750-0.413402.622101.74550K562PSIP1
TAF5LENSG00000135801.51046.74190828.320600.337502.811802.14270K562PTBP1
TAF5LENSG00000135801.52269.305301841.758900.301103.254202.09300K562PUM1
TAF5LENSG00000135801.51855.374201084.643300.7744011.2925010.24420K562PUS1
TAF5LENSG00000135801.51823.405701056.864800.7867017.3546015.84770K562RBM15
TAF5LENSG00000135801.5847.15740648.980000.384402.261401.52620K562RPS19
TAF5LENSG00000135801.51187.73700823.274600.528705.640604.09290K562SAFB
TAF5LENSG00000135801.51652.24180910.538500.859504.250302.62110K562SNRNP200
TAF5LENSG00000135801.51425.383301055.155700.433807.123505.69650K562SRPK2
TAF5LENSG00000135801.51086.95990812.025700.420603.925203.08930K562SRSF1
TAF5LENSG00000135801.51437.77360926.723400.633509.665308.12480K562SYNCRIP
TAF5LENSG00000135801.51141.46350730.928900.643003.208902.01600K562U2AF1
TAF5LENSG00000135801.5954.04670755.008100.337502.732301.93280K562U2AF2
TAF5LENSG00000135801.51377.71790984.774200.484308.474107.07240K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TAF5L is not available on ENCORE database.





4 RBPs can affect the splicing of TAF5L :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETAF5LENSG00000135801.5chr1-229741865229741940229737941229738666229745852229745957-0.058000.004030.03902excludedK562AQR
SETAF5LENSG00000135801.5chr1-2297418652297419402297379412297386662297458522297459570.133000.000070.02071includedK562HNRNPA1
SETAF5LENSG00000135801.5chr1-229741865229741940229737941229738666229745852229745957-0.090000.000000.00001excludedK562PUS1
SETAF5LENSG00000135801.5chr1-229741865229741940229737941229738666229745852229745957-0.079000.000050.00240excludedK562AGGF1
A3SSTAF5LENSG00000135801.5chr1-2297500872297502942297500872297502322297616312297617170.251000.000000.00000longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TAF5L is not avaliable on ENCORE database.