SNX24

General Information

Gene Name       : SNX24
Gene ID             : ENSG00000064652.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SNX24)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SNX24ENSG00000064652.107.304.505.90ENCSR000AEF
HepG2SNX24ENSG00000064652.1013.2121.4517.33ENCSR985KAT
K562SNX24ENSG00000064652.107.136.506.81ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SNX24 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SNX24 RNA is bound by 6 proteins.  







eCLIP assay for SNX24 is not avaliable on ENCORE database.





6 proteins are bound to SNX24 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5122344902122345007+3'-UTR,intron-Distal,polyA_site3.874534.06464HepG2CSTF2
chr5122281771122281855+3'-UTR,CDS,intron-Proximal3.291073.27569HepG2BCLAF1
chr5122181369122181434+CDS,intron-Distal,intron-Proximal3.823768.16617HepG2PRPF8
chr5122260676122260751+intron-Distal5.203495.41525HepG2PCBP2
chr5122260900122260982+intron-Distal5.6817012.30102HepG2PCBP2
chr5122348390122348524+intron-Distal3.751553.50219HepG2CSTF2
chr5122260724122260992+intron-Distal4.045744.12666HepG2HNRNPK
chr5122201506122201585+intron-Distal3.774003.27714HepG2HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SNX24 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SNX24 is not available on ENCORE database.

  • 66 RBPs can affect the levels of SNX24.  








The Knockdown/knockout RNA-Seq assay for SNX24 is not available on ENCORE database.





66 RBPs can affect the gene expression of SNX24 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SNX24ENSG00000064652.6325.73040246.065000.404502.363001.79420HepG2ACO1
SNX24ENSG00000064652.6361.61990497.76210-0.461002.151301.67590HepG2AKAP1
SNX24ENSG00000064652.6457.11200314.614600.538903.464901.90550HepG2ATP5C1
SNX24ENSG00000064652.6215.16100414.55480-0.946107.571206.47960HepG2CPSF6
SNX24ENSG00000064652.6590.23140378.918000.639306.711105.79310HepG2CELF1
SNX24ENSG00000064652.6321.51220407.48330-0.341902.368201.67420HepG2DAZAP1
SNX24ENSG00000064652.694.17470227.56720-1.2729012.0024010.51480HepG2DDX19B
SNX24ENSG00000064652.6448.28850200.015601.1642012.1179010.81540HepG2DDX21
SNX24ENSG00000064652.6338.26980195.645000.789805.581404.28180HepG2DDX24
SNX24ENSG00000064652.6328.60660215.920200.605802.911801.59140HepG2DDX27
SNX24ENSG00000064652.6543.40420370.149200.553804.055102.50190HepG2DDX47
SNX24ENSG00000064652.6444.27530323.673300.456802.559001.58150HepG2DDX5
SNX24ENSG00000064652.6228.12320409.55810-0.844305.570004.72040HepG2DDX6
SNX24ENSG00000064652.6248.25750393.77880-0.665503.956103.25510HepG2EIF2S1
SNX24ENSG00000064652.6270.67960435.20110-0.685104.069503.29800HepG2EIF4A3
SNX24ENSG00000064652.6274.54470385.06140-0.488002.754101.94120HepG2EIF4G2
SNX24ENSG00000064652.6413.48150301.949400.453402.557801.50730HepG2ESF1
SNX24ENSG00000064652.6525.02540351.926300.577003.073802.26650HepG2FIP1L1
SNX24ENSG00000064652.6324.01330192.069100.754304.121402.59480HepG2FKBP4
SNX24ENSG00000064652.6796.11510415.237600.938902.417701.47410HepG2FTO
SNX24ENSG00000064652.6212.76590297.74030-0.484802.347101.61940HepG2FUBP3
SNX24ENSG00000064652.6176.04510285.76230-0.698903.240502.02970HepG2FUS
SNX24ENSG00000064652.6326.96910439.01100-0.425102.038701.44160HepG2FXR1
SNX24ENSG00000064652.6253.24900407.29370-0.685504.244003.42820HepG2G3BP1
SNX24ENSG00000064652.6229.51250469.96690-1.034008.486107.40630HepG2GPKOW
SNX24ENSG00000064652.6157.10280412.31290-1.3920013.9997012.54970HepG2HNRNPK
SNX24ENSG00000064652.6296.02030371.20240-0.326501.935801.35930HepG2HNRNPL
SNX24ENSG00000064652.6843.15790448.494700.9106010.467609.33820HepG2HNRNPLL
SNX24ENSG00000064652.6645.66520478.639500.431702.200501.46650HepG2LARP4
SNX24ENSG00000064652.6265.56490441.63620-0.733804.529903.74020HepG2MATR3
SNX24ENSG00000064652.6243.78370452.05100-0.890906.716205.74870HepG2NCBP2
SNX24ENSG00000064652.6147.55280404.05680-1.4533019.4228017.51670HepG2NOL12
SNX24ENSG00000064652.6245.99800382.54510-0.637005.168704.38050HepG2PCBP1
SNX24ENSG00000064652.6294.04170389.26170-0.404702.471601.95000HepG2PTBP1
SNX24ENSG00000064652.6208.86990385.69270-0.884807.480606.56210HepG2PUF60
SNX24ENSG00000064652.6360.35710250.630700.523803.796303.09780HepG2PUS1
SNX24ENSG00000064652.6319.36400421.56340-0.400502.267901.69250HepG2QKI
SNX24ENSG00000064652.6537.62780261.084101.042006.262605.22550HepG2RAVER1
SNX24ENSG00000064652.6189.08750424.31480-1.1661013.4859011.80710HepG2RBM15
SNX24ENSG00000064652.6294.66670382.60220-0.376801.872101.30880HepG2RBM25
SNX24ENSG00000064652.6193.41590278.97780-0.528402.240801.35710HepG2RBM27
SNX24ENSG00000064652.6256.70680403.48280-0.652405.236004.42260HepG2RECQL
SNX24ENSG00000064652.6690.25700368.739600.904409.995408.83390HepG2RPLP0
SNX24ENSG00000064652.6215.30610366.56100-0.767704.336403.48240HepG2SF3A3
SNX24ENSG00000064652.6270.45120405.25770-0.583504.299903.58670HepG2SF3B4
SNX24ENSG00000064652.6716.89910493.956100.537302.335701.62050HepG2SNRNP70
SNX24ENSG00000064652.6506.27390375.410600.431303.704203.15040HepG2SRFBP1
SNX24ENSG00000064652.6526.51260423.007000.315702.011001.58990HepG2SRSF1
SNX24ENSG00000064652.6635.82220325.960900.9638015.9322014.90970HepG2SSB
SNX24ENSG00000064652.6195.42870336.43400-0.783704.862403.21240HepG2SSRP1
SNX24ENSG00000064652.6433.68900229.714100.916706.366305.40260HepG2SUPV3L1
SNX24ENSG00000064652.6330.70020437.04630-0.402301.988001.36110HepG2TARDBP
SNX24ENSG00000064652.6341.74520242.596200.494302.935202.42290HepG2TIAL1
SNX24ENSG00000064652.6255.10000398.79390-0.644603.388802.46190HepG2UBE2L3
SNX24ENSG00000064652.6426.46740325.082300.391502.683901.99380HepG2UPF1
SNX24ENSG00000064652.6312.19360210.383300.569302.497501.54750HepG2UPF2
SNX24ENSG00000064652.6519.73530357.530100.539605.588604.88160HepG2ZNF622
SNX24ENSG00000064652.6155.06600269.30050-0.796304.813703.94430K562AKAP8L
SNX24ENSG00000064652.6106.67190195.07760-0.870904.130103.44140K562AQR
SNX24ENSG00000064652.6271.02460172.597300.650903.134702.20470K562BOP1
SNX24ENSG00000064652.6154.97410303.65440-0.970407.349904.97830K562DDX19B
SNX24ENSG00000064652.6397.54080223.338400.831808.217607.17310K562DDX47
SNX24ENSG00000064652.6111.6725058.268800.938402.274501.37250K562EIF3A
SNX24ENSG00000064652.6241.44840166.970000.532002.337801.55860K562FIP1L1
SNX24ENSG00000064652.6269.65700186.720800.530102.328601.54220K562FMR1
SNX24ENSG00000064652.685.20750175.23010-1.040205.163904.08500K562GPKOW
SNX24ENSG00000064652.6131.00620201.84890-0.623602.810301.74410K562HNRNPL
SNX24ENSG00000064652.6206.44700137.326500.588102.218701.38870K562HNRNPM
SNX24ENSG00000064652.6397.94060226.388100.813705.792504.65570K562HSPD1
SNX24ENSG00000064652.696.36240143.88220-0.578302.099001.30450K562MATR3
SNX24ENSG00000064652.699.75240206.48730-1.049603.643902.46380K562PABPN1
SNX24ENSG00000064652.698.52060260.22450-1.4013011.8841010.65930K562RBM15
SNX24ENSG00000064652.6134.0034074.262300.851502.841302.01370K562RPS19
SNX24ENSG00000064652.691.08350138.21890-0.601702.197701.43700K562SF3B4
SNX24ENSG00000064652.658.53530106.28770-0.860602.483401.60230K562TIAL1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SNX24 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SNX24 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SNX24 is not avaliable on ENCORE database.