RP11-21J18.1

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-21J18.1 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-21J18.1 RNA is bound by 56 proteins.

eCLIP assay for RP11-21J18.1 is not avaliable on ENCORE database.

56 proteins are bound to RP11-21J18.1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr18	9137427	9137525	+	intron-Distal	3.88034	4.63118	HepG2	HNRNPM
chr18	9211787	9211820	+	intron-Distal,intron-Proximal	4.88892	6.15361	K562	PRPF8
chr18	9105928	9106024	+	intron-Distal	4.10989	8.23540	K562	TARDBP
chr18	9126857	9126906	+	CDS,intron-Distal,intron-Proximal	4.15166	42.78550	K562	PABPC4
chr18	9165158	9165221	+	intron-Distal	3.72931	4.03284	K562	MATR3
chr18	9211766	9211784	+	CDS,intron-Distal,intron-Proximal	3.14302	6.53346	K562	ZNF622
chr18	9228834	9228865	+	intron-Distal	5.08751	13.19522	K562	EXOSC5
chr18	9229784	9229809	+	intron-Distal	4.92829	19.93017	K562	EXOSC5
chr18	9238299	9238425	+	intron-Distal	3.80920	5.55877	HepG2	HNRNPL
chr18	9211598	9211659	+	CDS,intron-Distal	3.72039	4.17155	HepG2	BCLAF1
chr18	9220262	9220325	+	intron-Distal	3.71359	6.59733	K562	KHSRP
chr18	9103117	9103272	+	3'-UTR,5'-UTR,intron-Distal	3.32079	3.92412	K562	SRSF1
chr18	9232689	9232748	+	intron-Distal	4.69198	14.28138	K562	EXOSC5
chr18	9229645	9229681	+	intron-Distal	6.38669	20.67406	K562	EXOSC5
chr18	9196454	9196539	+	intron-Distal	3.62370	10.15825	K562	KHSRP
chr18	9137492	9137571	+	5'-UTR,intron-Distal	5.03913	10.88793	HepG2	EFTUD2
chr18	9124828	9124860	+	intron-Distal,intron-Proximal	3.24915	4.50936	K562	SF3B4
chr18	9232226	9232291	+	intron-Distal	4.34087	16.03090	K562	EXOSC5
chr18	9196400	9196428	+	intron-Distal	4.20096	12.30466	K562	KHSRP
chr18	9124871	9124912	+	CDS,intron-Distal,intron-Proximal	4.23569	42.74403	K562	PABPC4
chr18	9134183	9134193	+	CDS,intron-Distal,intron-Proximal	5.64035	19.20236	K562	PABPC4
chr18	9211775	9211787	+	CDS,intron-Distal,intron-Proximal	3.51595	5.31369	K562	PRPF8
chr18	9208602	9208636	+	intron-Distal,intron-Proximal	4.63795	9.13098	K562	SF3B4
chr18	9229352	9229419	+	intron-Distal	5.19684	7.39818	K562	HNRNPM
chr18	9178001	9178068	+	intron-Distal	3.76756	4.10408	K562	KHSRP
chr18	9231249	9231288	+	intron-Distal	5.02434	14.49454	K562	EXOSC5
chr18	9104650	9104752	+	intron-Distal	4.56046	20.38752	HepG2	PCBP2
chr18	9164513	9164606	+	intron-Distal	4.20830	4.26619	K562	MATR3
chr18	9170980	9171021	+	intron-Distal	4.69627	5.12432	K562	EXOSC5
chr18	9137426	9137503	+	intron-Distal	4.51594	7.19936	K562	GEMIN5
chr18	9195559	9195648	+	CDS,intron-Distal	4.90535	11.13876	HepG2	BCLAF1
chr18	9204429	9204499	+	CDS,intron-Distal,intron-Proximal	3.73078	7.96049	HepG2	U2AF2
chr18	9216844	9216895	+	CDS,intron-Distal	3.42791	5.56491	HepG2	BCLAF1
chr18	9211662	9211736	+	CDS,intron-Distal	3.23487	7.58409	K562	UCHL5
chr18	9203109	9203146	+	intron-Distal	4.11098	7.26586	K562	KHSRP
chr18	9165217	9165256	+	intron-Distal	6.31601	20.67406	K562	EXOSC5
chr18	9164698	9164807	+	intron-Distal	3.53602	6.01170	HepG2	MATR3
chr18	9228743	9228832	+	intron-Distal	4.49081	4.24113	K562	MATR3
chr18	9180566	9180616	+	intron-Distal	4.78125	5.62258	K562	KHSRP
chr18	9229341	9229399	+	intron-Distal	6.82121	27.06507	K562	EXOSC5
chr18	9203146	9203169	+	intron-Distal	3.49657	7.68575	K562	KHSRP
chr18	9196251	9196311	+	intron-Distal	5.90411	16.54119	HepG2	HNRNPL
chr18	9103174	9103251	+	3'-UTR,5'-UTR,intron-Distal	3.21672	7.13696	K562	RBM15
chr18	9117750	9117784	+	intron-Distal,intron-Proximal	4.65731	7.90970	K562	KHSRP
chr18	9179501	9179556	+	intron-Distal	3.53067	6.13018	K562	EXOSC5
chr18	9182363	9182398	+	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	4.05209	20.04438	K562	SF3B4
chr18	9216772	9216792	+	CDS,intron-Distal	3.19061	5.40132	HepG2	BCLAF1
chr18	9126859	9126904	+	CDS,intron-Distal	3.03470	4.58498	K562	APOBEC3C
chr18	9124870	9124931	+	CDS,intron-Distal,intron-Proximal	3.13665	7.86992	K562	DDX6
chr18	9137616	9137691	+	5'-UTR,intron-Distal	3.32368	6.74466	K562	DROSHA
chr18	9208636	9208700	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.14520	9.62351	K562	SF3B4
chr18	9126851	9126906	+	CDS,intron-Distal,intron-Proximal	3.59500	20.50059	K562	ZC3H11A
chr18	9134191	9134265	+	CDS,intron-Distal	3.19442	5.54628	K562	ZC3H11A
chr18	9196405	9196513	+	intron-Distal	3.43706	6.42750	HepG2	KHSRP
chr18	9232481	9232534	+	intron-Distal	5.31871	6.88558	K562	HNRNPM
chr18	9229543	9229590	+	intron-Distal	5.55872	20.39543	K562	EXOSC5
chr18	9196255	9196326	+	intron-Distal	3.83876	19.37614	K562	AGGF1
chr18	9196348	9196480	+	intron-Distal	5.78199	15.93068	K562	QKI
chr18	9126853	9126908	+	CDS,intron-Distal,intron-Proximal	3.01757	6.88399	K562	LIN28B
chr18	9117047	9117098	+	intron-Distal	5.67668	10.84270	HepG2	HNRNPC
chr18	9222073	9222218	+	intron-Distal,intron-Proximal	4.65468	6.41805	HepG2	KHSRP
chr18	9124969	9124981	+	CDS,intron-Distal	4.20049	6.57313	K562	PABPC4
chr18	9195648	9195700	+	CDS,intron-Distal,intron-Proximal	3.96914	10.64917	HepG2	BCLAF1
chr18	9171589	9171642	+	intron-Distal	4.08873	4.28663	HepG2	SUGP2
chr18	9177926	9177950	+	intron-Distal	3.09774	5.40698	K562	KHSRP
chr18	9162606	9162688	+	intron-Distal	4.97617	17.84667	K562	QKI
chr18	9119662	9119774	+	intron-Distal,intron-Proximal	3.04485	6.98384	K562	KHSRP
chr18	9222147	9222248	+	intron-Distal	3.88640	11.54160	K562	KHSRP
chr18	9180195	9180272	+	intron-Distal	3.96001	7.42482	K562	KHSRP
chr18	9196182	9196238	+	intron-Distal	3.56798	22.94146	K562	AGGF1
chr18	9196115	9196129	+	intron-Distal	3.70481	10.21878	K562	HNRNPL
chr18	9196233	9196251	+	intron-Distal	4.82826	6.92541	HepG2	HNRNPL
chr18	9232291	9232330	+	intron-Distal	3.62560	10.73004	K562	EXOSC5
chr18	9231988	9232024	+	intron-Distal	5.86825	13.65405	K562	EXOSC5
chr18	9163905	9163962	+	intron-Distal	4.13095	4.57394	K562	HNRNPM
chr18	9122575	9122680	+	CDS,intron-Distal,intron-Proximal	3.40794	3.68571	K562	IGF2BP1
chr18	9195551	9195710	+	CDS,intron-Distal,intron-Proximal	4.97099	8.99884	HepG2	GRWD1
chr18	9137321	9137353	+	intron-Distal	3.70292	4.76597	HepG2	EFTUD2
chr18	9229924	9230029	+	intron-Distal	4.37297	7.54819	K562	HNRNPM
chr18	9208770	9208836	+	CDS,intron-Distal,intron-Proximal	3.52685	6.55928	HepG2	PRPF8
chr18	9117874	9117914	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.23793	11.32195	K562	PRPF8
chr18	9124985	9125023	+	intron-Distal,intron-Proximal	5.26838	7.81430	K562	AQR
chr18	9104155	9104169	+	5'-UTR,intron-Distal	3.87447	13.60949	K562	U2AF1
chr18	9137414	9137542	+	intron-Distal	4.10566	11.52075	HepG2	NKRF
chr18	9153796	9153878	+	intron-Distal	5.01866	4.74221	HepG2	PTBP1
chr18	9164736	9164775	+	intron-Distal	6.20384	29.01655	K562	EXOSC5
chr18	9177847	9177892	+	intron-Distal	3.72647	7.19702	K562	KHSRP
chr18	9232279	9232327	+	intron-Distal	4.16465	4.28571	K562	HNRNPM
chr18	9122514	9122547	+	CDS,intron-Distal	4.26468	5.51636	K562	GPKOW
chr18	9235071	9235120	+	intron-Distal	4.02623	3.04182	K562	HNRNPM
chr18	9164331	9164386	+	intron-Distal	6.91640	25.71745	K562	EXOSC5
chr18	9171336	9171371	+	intron-Distal	4.74398	5.76606	K562	EXOSC5
chr18	9122514	9122548	+	CDS,intron-Distal	3.25859	9.83233	K562	YBX3
chr18	9196361	9196458	+	intron-Distal	3.37080	6.09178	HepG2	QKI
chr18	9233339	9233360	+	intron-Distal	5.16718	8.69609	K562	EXOSC5
chr18	9204421	9204523	+	CDS,intron-Distal,intron-Proximal	4.05692	9.08415	K562	U2AF2
chr18	9231916	9231956	+	intron-Distal	4.83469	17.66685	K562	EXOSC5
chr18	9122584	9122668	+	CDS,intron-Distal	3.13840	6.74734	K562	PUM1
chr18	9117535	9117611	+	intron-Distal	3.08437	4.17429	K562	HNRNPU
chr18	9254036	9254133	+	intron-Distal,intron-Proximal	3.45040	5.35459	K562	KHSRP
chr18	9164781	9164819	+	intron-Distal	6.25827	15.98693	K562	EXOSC5
chr18	9162889	9162960	+	intron-Distal	5.54649	23.70087	K562	EXOSC5
chr18	9124860	9124893	+	CDS,intron-Distal,intron-Proximal	3.27068	6.94390	K562	SF3B4
chr18	9211736	9211783	+	CDS,intron-Distal,intron-Proximal	3.43260	9.72918	K562	UCHL5
chr18	9104140	9104155	+	5'-UTR,intron-Distal	4.22262	31.49858	K562	U2AF1
chr18	9221800	9221862	+	CDS,intron-Distal,intron-Proximal	4.52264	6.11702	K562	SF3B4
chr18	9238453	9238530	+	intron-Distal	3.06341	3.62826	K562	HNRNPL
chr18	9203169	9203201	+	intron-Distal	3.61588	8.11893	K562	KHSRP
chr18	9171712	9171770	+	intron-Distal	3.08302	3.58474	K562	EXOSC5
chr18	9171510	9171589	+	intron-Distal	4.83787	17.89299	K562	EXOSC5
chr18	9124823	9124923	+	CDS,intron-Distal,intron-Proximal	3.40917	7.99874	HepG2	BUD13
chr18	9134203	9134258	+	CDS,intron-Distal	3.90247	6.30386	K562	DDX6
chr18	9204354	9204370	+	intron-Distal	4.53115	6.58261	K562	KHSRP
chr18	9136844	9136898	+	5'-UTR,intron-Distal	5.22330	7.93248	K562	RBM15
chr18	9187031	9187167	+	intron-Distal	3.21512	3.84723	K562	ILF3
chr18	9110520	9110574	+	intron-Distal	3.16423	3.45912	HepG2	HNRNPC
chr18	9236874	9236959	+	intron-Distal	3.08260	4.14200	K562	SAFB2
chr18	9137038	9137185	+	5'-UTR,intron-Distal,intron-Proximal	4.50139	12.97959	HepG2	EFTUD2
chr18	9124963	9124981	+	CDS,intron-Distal	3.31476	4.94579	K562	ZC3H11A
chr18	9182371	9182430	+	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.79034	19.34595	K562	ZNF622
chr18	9183792	9183825	+	intron-Distal	4.51972	7.90970	K562	KHSRP
chr18	9229931	9229990	+	intron-Distal	4.27326	3.78432	HepG2	MATR3
chr18	9136922	9136967	+	5'-UTR,intron-Distal,intron-Proximal	3.07367	3.17635	HepG2	PPIG
chr18	9170631	9170714	+	intron-Distal	4.48360	9.10500	K562	EXOSC5
chr18	9162815	9162855	+	intron-Distal	4.42705	13.37518	K562	EXOSC5
chr18	9165356	9165386	+	intron-Distal	6.05498	16.98921	K562	EXOSC5
chr18	9122503	9122531	+	CDS,intron-Distal,intron-Proximal	3.32243	8.46497	K562	BUD13
chr18	9122458	9122536	+	CDS,intron-Distal,intron-Proximal	3.74915	8.08874	K562	SF3B4
chr18	9164703	9164814	+	intron-Distal	4.62716	4.64592	HepG2	HNRNPM
chr18	9116770	9116848	+	intron-Distal	3.30752	7.19663	K562	TIA1
chr18	9163422	9163467	+	intron-Distal	5.34355	16.45282	K562	EXOSC5
chr18	9164692	9164736	+	intron-Distal	7.36322	39.56674	K562	EXOSC5
chr18	9229920	9229988	+	intron-Distal	4.66865	4.12563	HepG2	EXOSC5
chr18	9124812	9124860	+	intron-Distal,intron-Proximal	3.74788	5.01422	K562	GPKOW
chr18	9182398	9182468	+	3'-UTR,5'-UTR,CDS,intron-Distal	3.27642	13.76324	K562	SF3B4
chr18	9111859	9111912	+	intron-Distal	4.27527	4.51699	K562	ILF3
chr18	9171533	9171592	+	intron-Distal	5.83057	11.86869	HepG2	HNRNPM
chr18	9238167	9238268	+	intron-Distal	4.37482	7.56720	K562	PTBP1
chr18	9230517	9230557	+	intron-Distal	6.43725	20.00565	K562	EXOSC5
chr18	9171495	9171588	+	intron-Distal	4.23786	7.03506	HepG2	SUGP2
chr18	9126827	9126851	+	CDS,intron-Distal,intron-Proximal	3.55277	8.40205	K562	PABPC4
chr18	9233748	9233786	+	intron-Distal	3.94182	9.39208	K562	EXOSC5
chr18	9233398	9233420	+	intron-Distal	5.59819	11.66247	K562	EXOSC5
chr18	9104116	9104180	+	5'-UTR,intron-Distal	4.25680	38.10627	K562	U2AF2
chr18	9182370	9182439	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.83999	6.12211	K562	U2AF2
chr18	9182430	9182516	+	3'-UTR,CDS,intron-Distal	3.26088	13.40547	K562	ZNF622
chr18	9170982	9171029	+	intron-Distal	5.22765	4.53244	K562	HNRNPM
chr18	9125038	9125093	+	intron-Distal,intron-Proximal	3.33292	3.38150	K562	KHSRP
chr18	9231387	9231435	+	intron-Distal	5.02922	12.87128	K562	EXOSC5
chr18	9164456	9164511	+	intron-Distal	5.45725	19.07792	K562	EXOSC5
chr18	9164682	9164818	+	intron-Distal	3.93393	8.88618	K562	MATR3
chr18	9216761	9216906	+	CDS,intron-Distal,intron-Proximal	3.02956	4.24789	K562	SRSF1
chr18	9163314	9163370	+	intron-Distal	4.35975	3.45817	K562	MATR3
chr18	9182376	9182390	+	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	4.33760	4.94878	HepG2	GRWD1
chr18	9165120	9165146	+	intron-Distal	6.06660	14.31968	K562	EXOSC5
chr18	9171598	9171636	+	intron-Distal	4.29950	7.91405	K562	EXOSC5
chr18	9211765	9211787	+	CDS,intron-Distal,intron-Proximal	3.66530	8.81620	HepG2	BCLAF1
chr18	9222095	9222147	+	intron-Distal,intron-Proximal	3.48208	5.40624	K562	KHSRP
chr18	9196135	9196148	+	intron-Distal	3.42667	7.79751	HepG2	HNRNPL
chr18	9182548	9182601	+	intron-Distal,intron-Proximal	5.10578	7.41235	K562	RBM22
chr18	9171535	9171591	+	intron-Distal	5.66682	28.80860	K562	HNRNPM
chr18	9124860	9124907	+	CDS,intron-Distal,intron-Proximal	3.52039	5.31320	K562	GPKOW
chr18	9174969	9175013	+	intron-Distal	3.80479	3.29248	HepG2	SUGP2
chr18	9233624	9233675	+	intron-Distal	5.13095	8.15874	K562	HNRNPM
chr18	9106029	9106079	+	intron-Distal	3.24419	6.51048	HepG2	HNRNPM
chr18	9134183	9134272	+	CDS,intron-Distal,intron-Proximal	3.91835	11.06965	HepG2	LARP4
chr18	9211741	9211765	+	CDS,intron-Distal	3.40638	5.15776	HepG2	BCLAF1
chr18	9164179	9164198	+	intron-Distal	5.55075	10.34009	K562	EXOSC5
chr18	9196139	9196174	+	intron-Distal	3.18519	7.37281	K562	HNRNPL
chr18	9196129	9196139	+	intron-Distal	3.85189	10.60097	K562	HNRNPL
chr18	9122510	9122514	+	CDS,intron-Distal,intron-Proximal	3.57657	6.00726	K562	YBX3
chr18	9211662	9211730	+	CDS,intron-Distal	3.67736	8.25092	HepG2	BCLAF1
chr18	9182390	9182408	+	3'-UTR,5'-UTR,intron-Distal	4.40224	5.64460	HepG2	GRWD1
chr18	9164052	9164109	+	intron-Distal	3.32303	4.32038	K562	HNRNPM
chr18	9171498	9171612	+	intron-Distal	4.48184	9.61755	K562	MATR3
chr18	9231535	9231572	+	intron-Distal	4.69833	17.98681	K562	EXOSC5
chr18	9134283	9134336	+	3'-UTR,intron-Distal,intron-Proximal	5.52958	21.69930	K562	PUM2
chr18	9119588	9119628	+	intron-Distal,intron-Proximal	4.31979	5.63763	K562	AQR
chr18	9216038	9216087	+	intron-Distal	3.40187	3.77330	K562	SAFB
chr18	9137628	9137681	+	5'-UTR,intron-Distal	3.93117	5.72723	HepG2	EFTUD2
chr18	9182375	9182519	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.47210	12.05915	HepG2	BCLAF1
chr18	9225829	9225897	+	intron-Distal	4.12687	4.71638	K562	HNRNPL
chr18	9137127	9137160	+	intron-Distal,intron-Proximal	5.00838	4.79919	K562	GEMIN5
chr18	9170625	9170716	+	intron-Distal	3.27002	4.08528	HepG2	SUGP2
chr18	9196116	9196135	+	intron-Distal	4.05001	12.20080	HepG2	HNRNPL
chr18	9232116	9232165	+	intron-Distal	3.84602	3.54208	HepG2	SUGP2
chr18	9204020	9204096	+	intron-Distal	3.33150	4.03817	HepG2	KHSRP
chr18	9164874	9164932	+	intron-Distal	5.73316	37.67771	K562	EXOSC5
chr18	9219144	9219232	+	intron-Distal	3.07447	6.89326	K562	KHSRP
chr18	9108701	9108717	+	intron-Distal	3.89390	3.24242	HepG2	HNRNPC
chr18	9182344	9182363	+	intron-Distal,intron-Proximal	4.86767	9.53610	K562	SF3B4
chr18	9196167	9196231	+	intron-Distal	4.30345	11.92625	HepG2	HNRNPL
chr18	9117914	9117942	+	intron-Distal,intron-Proximal	5.07714	12.68376	K562	PRPF8
chr18	9177892	9177926	+	intron-Distal	4.03239	10.16833	K562	KHSRP
chr18	9215283	9215329	+	intron-Distal	3.74592	3.33602	K562	SAFB
chr18	9126816	9126854	+	CDS,intron-Distal,intron-Proximal	4.20134	3.35169	HepG2	U2AF2
chr18	9190818	9190939	+	intron-Distal	3.32780	3.28806	K562	KHSRP
chr18	9221875	9221953	+	CDS,intron-Distal	4.06588	9.37631	HepG2	BCLAF1
chr18	9124871	9124916	+	CDS,intron-Distal,intron-Proximal	3.29444	3.89734	K562	ZC3H11A
chr18	9172527	9172596	+	intron-Distal	4.78329	6.75776	K562	MATR3
chr18	9163316	9163377	+	intron-Distal	5.10784	23.50717	K562	EXOSC5
chr18	9122681	9122729	+	intron-Distal,intron-Proximal	3.95370	6.32052	K562	AQR
chr18	9196252	9196329	+	intron-Distal	4.93667	30.98882	K562	HNRNPL
chr18	9229927	9229976	+	intron-Distal	6.75654	51.81491	K562	EXOSC5
chr18	9230343	9230394	+	intron-Distal	6.00098	29.68677	K562	EXOSC5
chr18	9171732	9171774	+	intron-Distal	5.14175	6.62732	K562	HNRNPM
chr18	9183728	9183792	+	intron-Distal	3.41768	6.60316	K562	KHSRP
chr18	9123654	9123750	+	intron-Distal	3.45207	3.06310	K562	HNRNPC
chr18	9203300	9203372	+	intron-Distal	4.75871	6.51328	K562	KHSRP
chr18	9104118	9104140	+	5'-UTR,intron-Distal	3.84854	28.56064	K562	U2AF1
chr18	9165289	9165305	+	intron-Distal	6.04245	17.32358	K562	EXOSC5
chr18	9195760	9195818	+	intron-Distal,intron-Proximal	3.90338	3.71735	K562	TIA1
chr18	9232830	9232918	+	intron-Distal	3.49307	3.09339	K562	MATR3
chr18	9180138	9180195	+	intron-Distal	5.60549	10.72437	K562	KHSRP
chr18	9229976	9230009	+	intron-Distal	6.95186	29.76308	K562	EXOSC5
chr18	9234724	9234761	+	intron-Distal	3.16477	3.15041	K562	EXOSC5
chr18	9124870	9124949	+	CDS,intron-Distal,intron-Proximal	3.85548	5.17497	K562	APOBEC3C
chr18	9195826	9195875	+	intron-Distal	4.06438	3.49003	K562	PRPF8
chr18	9106083	9106123	+	intron-Distal	3.35886	5.13070	HepG2	HNRNPM
chr18	9163247	9163286	+	intron-Distal	4.40379	16.96327	K562	EXOSC5
chr18	9232591	9232637	+	intron-Distal	4.48348	13.07215	K562	EXOSC5
chr18	9137106	9137139	+	intron-Distal,intron-Proximal	3.17999	3.07461	K562	DROSHA
chr18	9124912	9124950	+	CDS,intron-Distal	3.29424	6.87580	K562	PABPC4
chr18	9203201	9203275	+	intron-Distal	3.17770	7.79040	K562	KHSRP
chr18	9232076	9232098	+	intron-Distal	4.28192	8.21325	K562	EXOSC5
chr18	9119269	9119353	+	CDS,intron-Distal,intron-Proximal	4.54423	29.13116	K562	SF3B4
chr18	9229893	9229921	+	intron-Distal	4.64684	10.61709	K562	EXOSC5
chr18	9123483	9123555	+	intron-Distal	3.80773	3.82343	K562	HNRNPC
chr18	9229809	9229830	+	intron-Distal	6.53357	23.02835	K562	EXOSC5
chr18	9171481	9171590	+	intron-Distal	4.48016	9.92053	HepG2	MATR3
chr18	9123250	9123329	+	intron-Distal	4.73637	5.92328	K562	RBFOX2
chr18	9196428	9196454	+	intron-Distal	3.69049	9.42066	K562	KHSRP
chr18	9164548	9164611	+	intron-Distal	6.55744	22.68925	K562	EXOSC5
chr18	9122615	9122630	+	CDS,intron-Distal	3.27276	13.90438	K562	YBX3
chr18	9107139	9107213	+	intron-Distal	3.47029	9.60834	K562	HNRNPA1
chr18	9231017	9231039	+	intron-Distal	5.25827	9.02315	K562	EXOSC5
chr18	9171469	9171510	+	intron-Distal	3.89915	4.91037	K562	EXOSC5
chr18	9117835	9117853	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.87053	7.94128	HepG2	DDX3X
chr18	9196257	9196319	+	intron-Distal	4.17990	3.69238	K562	GTF2F1
chr18	9134182	9134195	+	CDS,intron-Distal,intron-Proximal	4.91766	3.27332	K562	DDX6
chr18	9230599	9230636	+	intron-Distal	5.99744	15.32150	K562	EXOSC5
chr18	9230178	9230235	+	intron-Distal	5.19986	24.16064	K562	EXOSC5
chr18	9220235	9220262	+	intron-Distal	3.27194	5.62143	K562	KHSRP
chr18	9195636	9195697	+	CDS,intron-Distal,intron-Proximal	3.43078	3.88359	K562	MTPAP
chr18	9231070	9231128	+	intron-Distal	5.37158	18.42282	K562	EXOSC5
chr18	9221953	9222003	+	CDS,intron-Distal,intron-Proximal	4.20430	7.09561	HepG2	BCLAF1
chr18	9177950	9178001	+	intron-Distal	3.20584	3.76473	K562	KHSRP
chr18	9231157	9231212	+	intron-Distal	4.45713	5.57532	K562	HNRNPM
chr18	9119592	9119622	+	intron-Distal,intron-Proximal	3.70443	4.06013	K562	PRPF8
chr18	9230009	9230055	+	intron-Distal	5.80009	39.00562	K562	EXOSC5
chr18	9232117	9232182	+	intron-Distal	5.64353	35.02585	K562	EXOSC5
chr18	9232392	9232442	+	intron-Distal	6.05545	17.32582	K562	EXOSC5
chr18	9118179	9118289	+	intron-Distal	4.19986	3.82619	K562	ILF3
chr18	9230263	9230299	+	intron-Distal	4.55232	13.37518	K562	EXOSC5
chr18	9117835	9117846	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.70956	5.87323	K562	IGF2BP2
chr18	9163783	9163840	+	intron-Distal	4.18578	3.45817	K562	MATR3
chr18	9134214	9134265	+	CDS,intron-Distal	3.55770	12.40338	K562	RPS3
chr18	9137309	9137390	+	intron-Distal	3.78196	3.24283	HepG2	NKRF
chr18	9164869	9164936	+	intron-Distal	4.43089	6.77622	K562	HNRNPM
chr18	9136917	9136964	+	5'-UTR,intron-Distal,intron-Proximal	3.44640	8.10579	K562	ZNF622
chr18	9233026	9233063	+	intron-Distal	5.02434	14.49653	K562	EXOSC5
chr18	9230080	9230121	+	intron-Distal	4.66370	17.02277	K562	EXOSC5
chr18	9108717	9108749	+	intron-Distal	3.91680	3.21162	HepG2	HNRNPC
chr18	9136798	9136890	+	5'-UTR,intron-Distal	3.78815	3.19625	HepG2	NCBP2
chr18	9117948	9118015	+	intron-Distal,intron-Proximal	3.70764	5.89182	K562	EFTUD2
chr18	9216755	9216852	+	CDS,intron-Distal,intron-Proximal	3.77256	4.74894	HepG2	HLTF
chr18	9233420	9233466	+	intron-Distal	6.04555	15.31952	K562	EXOSC5
chr18	9122896	9122993	+	intron-Distal	3.33435	7.25130	K562	KHSRP
chr18	9165305	9165356	+	intron-Distal	5.96239	59.92416	K562	EXOSC5
chr18	9238182	9238294	+	intron-Distal	3.91992	4.78196	HepG2	PTBP1
chr18	9183825	9183879	+	intron-Distal	5.13765	7.61259	K562	KHSRP
chr18	9117875	9117935	+	3'-UTR,CDS,intron-Distal,intron-Proximal	6.74481	17.34326	HepG2	PRPF8
chr18	9220156	9220212	+	intron-Distal	4.19283	10.58053	K562	KHSRP
chr18	9196062	9196116	+	intron-Distal	3.56104	4.29522	HepG2	HNRNPL
chr18	9232821	9232907	+	intron-Distal	5.26810	27.77033	K562	EXOSC5
chr18	9119659	9119712	+	intron-Distal,intron-Proximal	4.28466	3.49003	K562	PRPF8
chr18	9232549	9232590	+	intron-Distal	5.32718	20.06578	K562	EXOSC5
chr18	9123495	9123560	+	intron-Distal	3.12619	5.60800	HepG2	HNRNPC
chr18	9195755	9195804	+	intron-Distal,intron-Proximal	3.29947	4.21588	K562	PRPF8
chr18	9208648	9208700	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.33963	4.26492	HepG2	BCLAF1
chr18	9232604	9232652	+	intron-Distal	5.28377	8.94476	K562	HNRNPM
chr18	9117834	9117894	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.30420	33.93791	K562	DDX3X
chr18	9229635	9229732	+	intron-Distal	4.35503	10.06297	K562	KHSRP
chr18	9174749	9174824	+	intron-Distal	4.35019	5.01208	K562	MATR3
chr18	9124870	9124908	+	CDS,intron-Distal,intron-Proximal	4.15307	4.00320	K562	AQR
chr18	9233559	9233605	+	intron-Distal	4.58450	4.53244	K562	HNRNPM
chr18	9230678	9230702	+	intron-Distal	4.32702	8.80920	K562	EXOSC5
chr18	9137295	9137386	+	intron-Distal	3.62532	4.36583	K562	XRN2
chr18	9196089	9196115	+	intron-Distal	3.49492	8.73187	K562	HNRNPL
chr18	9102857	9102912	+	5'-UTR,CDS,intron-Distal,intron-Proximal	4.31251	4.22574	K562	XRN2
chr18	9197591	9197692	+	intron-Distal	3.62029	7.82071	K562	KHSRP
chr18	9204519	9204587	+	CDS,intron-Distal,intron-Proximal	3.36617	3.54718	K562	PRPF8
chr18	9196148	9196167	+	intron-Distal	4.75811	12.62385	HepG2	HNRNPL
chr18	9220212	9220235	+	intron-Distal	3.68045	7.01633	K562	KHSRP
chr18	9163081	9163134	+	intron-Distal	4.90993	16.37763	K562	EXOSC5
chr18	9221876	9222006	+	CDS,intron-Distal,intron-Proximal	3.13059	12.04934	K562	UCHL5
chr18	9137441	9137508	+	intron-Distal	3.55124	4.23643	HepG2	XRN2
chr18	9232478	9232532	+	intron-Distal	6.62718	26.05426	K562	EXOSC5
chr18	9196183	9196248	+	intron-Distal	5.10662	29.02136	K562	HNRNPL
chr18	9180112	9180138	+	intron-Distal	4.31803	7.05443	K562	KHSRP
chr18	9195552	9195608	+	CDS,intron-Distal	3.46266	6.73967	K562	ZNF622
chr18	9216792	9216844	+	CDS,intron-Distal	3.81936	4.51739	HepG2	BCLAF1
chr18	9229082	9229110	+	intron-Distal	5.68697	12.99096	K562	EXOSC5
chr18	9180616	9180664	+	intron-Distal	3.57019	4.30679	K562	KHSRP
chr18	9164871	9164929	+	intron-Distal	4.23336	7.19049	K562	MATR3
chr18	9102753	9102796	+	CDS,intron-Proximal	3.33980	7.68378	K562	DROSHA
chr18	9102744	9102798	+	CDS,intron-Proximal	3.04179	7.66128	HepG2	NCBP2
chr18	9254196	9254257	+	3'-UTR,CDS,intron-Proximal	3.46659	3.03452	HepG2	U2AF2
chr18	9102735	9102796	+	5'-UTR,CDS,intron-Proximal	4.47974	24.92522	HepG2	DDX3X
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-21J18.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-21J18.1 is not available on ENCORE database.
27 RBPs can affect the levels of RP11-21J18.1.

The Knockdown/knockout RNA-Seq assay for RP11-21J18.1 is not available on ENCORE database.

27 RBPs can affect the gene expression of RP11-21J18.1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-21J18.1	ENSG00000265257.1	241.07820	0.00000	99999.99990	8.21180	6.95960	HepG2	DDX55
RP11-21J18.1	ENSG00000265257.1	473.46910	242.70690	0.96400	8.21090	5.01290	HepG2	EIF3H
RP11-21J18.1	ENSG00000265257.1	98.03000	0.00000	99999.99990	3.08770	2.27900	HepG2	FIP1L1
RP11-21J18.1	ENSG00000265257.1	340.06840	0.00000	99999.99990	13.62590	11.08160	HepG2	NONO
RP11-21J18.1	ENSG00000265257.1	139.92800	0.00000	99999.99990	6.48150	4.12870	HepG2	PA2G4
RP11-21J18.1	ENSG00000265257.1	150.55150	0.00000	99999.99990	4.77380	3.17550	HepG2	PKM
RP11-21J18.1	ENSG00000265257.1	153.85200	0.00000	99999.99990	22.87720	21.37990	HepG2	RPS19
RP11-21J18.1	ENSG00000265257.1	507.00040	0.00000	99999.99990	113.97580	109.62170	HepG2	SERBP1
RP11-21J18.1	ENSG00000265257.1	117.96590	0.00000	99999.99990	25.38070	23.71280	HepG2	SUPV3L1
RP11-21J18.1	ENSG00000265257.1	147.35810	0.00000	99999.99990	13.12120	11.28040	HepG2	TFIP11
RP11-21J18.1	ENSG00000265257.1	67.15750	264.88600	-1.97980	15.53840	14.15860	HepG2	ZC3H8
RP11-21J18.1	ENSG00000265257.1	320.52080	42.88770	2.90170	3.99570	1.71560	K562	CPSF7
RP11-21J18.1	ENSG00000265257.1	315.84740	43.15220	2.87160	3.63310	2.08000	K562	DNAJC21
RP11-21J18.1	ENSG00000265257.1	53.41720	0.00000	99999.99990	17.37730	14.33200	K562	EXOSC5
RP11-21J18.1	ENSG00000265257.1	112.28790	641.73580	-2.51480	6.41470	5.20970	K562	GPKOW
RP11-21J18.1	ENSG00000265257.1	125.27720	0.00000	99999.99990	7.39160	5.05030	K562	HNRNPA2B1
RP11-21J18.1	ENSG00000265257.1	258.47500	40.45920	2.67540	9.28840	6.65620	K562	KHDRBS1
RP11-21J18.1	ENSG00000265257.1	20.96800	0.00000	99999.99990	6.55310	5.15810	K562	KIF1C
RP11-21J18.1	ENSG00000265257.1	11.83840	0.00000	99999.99990	3.51960	2.24600	K562	MSI2
RP11-21J18.1	ENSG00000265257.1	260.39910	40.29960	2.69180	7.12650	3.77840	K562	PARN
RP11-21J18.1	ENSG00000265257.1	890.88990	32.15260	4.79210	43.31490	38.92070	K562	PPIL4
RP11-21J18.1	ENSG00000265257.1	0.00000	194.82190	-99999.99999	6.51530	4.90070	K562	RPS3
RP11-21J18.1	ENSG00000265257.1	1159.77430	0.00000	99999.99990	22.86720	18.51410	K562	TAF15
RP11-21J18.1	ENSG00000265257.1	593.33240	0.00000	99999.99990	142.63480	138.28260	K562	U2AF1
RP11-21J18.1	ENSG00000265257.1	31.61620	356.99480	-3.49720	11.52670	9.29270	K562	UTP3
RP11-21J18.1	ENSG00000265257.1	536.07720	0.00000	99999.99990	4.99560	2.56050	K562	YTHDC2
RP11-21J18.1	ENSG00000265257.1	41.89350	0.00000	99999.99990	4.46680	2.15450	K562	ZNF800
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-21J18.1 is not available on ENCORE database.

6 RBPs can affect the splicing of RP11-21J18.1 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9103089	9103322			9102733	9102795	9117835	9117901	0.06700	0.00000	0.00000	included	K562	AQR
SE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9119323	9119386			9117835	9117901	9119471	9119588	-0.07800	0.00000	0.00000	excluded	K562	AQR
SE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9124919	9124981			9122458	9122679	9126828	9126905	-0.05200	0.00000	0.00000	excluded	K562	AQR
SE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9119328	9119386			9117835	9117901	9119471	9119588	-0.07300	0.00000	0.00000	excluded	K562	U2AF1
MXE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9124850	9124981	9126828	9126905	9122510	9122679	9134183	9134290	0.15300	0.00001	0.00038	1included	HepG2	U2AF1
MXE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9103089	9103322	9116127	9116297	9102733	9102795	9117835	9117901	-0.32000	0.00612	0.07389	2included	K562	U2AF1
MXE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9103089	9103187	9116127	9116297	9102733	9102795	9117835	9117901	-0.46400	0.00108	0.02092	2included	K562	U2AF1
MXE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9117835	9117901	9119323	9119386	9102733	9102795	9119471	9119588	-0.06500	0.00455	0.06465	2included	K562	PUS1
MXE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9103094	9103187	9104147	9104223	9102733	9102795	9117835	9117901	0.49400	0.00593	0.04151	1included	K562	AQR
MXE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9119471	9119588	9122510	9122679	9117835	9117901	9124871	9124981	0.05500	0.00000	0.00000	1included	K562	AQR
MXE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9119471	9119588	9126828	9126905	9117835	9117901	9134183	9134290	0.21100	0.00000	0.00000	1included	K562	AQR
MXE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9103089	9103187	9104147	9104223	9102733	9102795	9117835	9117901	0.08700	0.00626	0.04343	1included	K562	AQR
MXE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9117795	9117901	9119323	9119386	9102733	9102795	9119471	9119588	0.10100	0.00000	0.00000	1included	K562	AQR
MXE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9117835	9117901	9126828	9126905	9102733	9102795	9134183	9134290	-0.06400	0.00016	0.00180	2included	K562	AQR
MXE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9117835	9117901	9119471	9119588	9102733	9102795	9122510	9122679	-0.11100	0.00003	0.00035	2included	K562	AQR
MXE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9117835	9117901	9119323	9119386	9102733	9102795	9119471	9119588	-0.08200	0.00481	0.05389	2included	K562	U2AF2
MXE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9124871	9124981	9126828	9126905	9122510	9122679	9134183	9134290	0.06700	0.00131	0.05230	1included	HepG2	BCCIP
MXE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9124871	9124981	9126828	9126905	9122510	9122679	9134183	9134290	0.10500	0.00000	0.00001	1included	HepG2	DDX55
MXE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9124850	9124981	9126828	9126905	9122510	9122679	9134183	9134290	0.14700	0.00000	0.00000	1included	HepG2	U2AF2
MXE	RP11-21J18.1	ENSG00000265257.1	chr18	+	9124919	9124981	9126828	9126905	9122510	9122679	9134183	9134290	0.06000	0.00260	0.01802	1included	HepG2	U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-21J18.1

General Information

Functions

Localization

Domains (AlphaFold: RP11-21J18.1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-21J18.1 is not avaliable on ENCORE database.

56 proteins are bound to RP11-21J18.1 RNA:

eCLIP assay for RP11-21J18.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-21J18.1 is not available on ENCORE database.

27 RBPs can affect the gene expression of RP11-21J18.1 :

The Knockdown/knockout RNA-Seq assay for RP11-21J18.1 is not available on ENCORE database.

6 RBPs can affect the splicing of RP11-21J18.1 :

The Knockdown/knockout RNA-Seq assay for RP11-21J18.1 is not avaliable on ENCORE database.