RASSF7

General Information

Gene Name       : RASSF7
Gene ID             : ENSG00000099849.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RASSF7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RASSF7ENSG00000099849.140.100.760.43ENCSR000AEF
HepG2RASSF7ENSG00000099849.1414.022.048.03ENCSR985KAT
K562RASSF7ENSG00000099849.1412.291.997.14ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RASSF7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RASSF7 RNA is bound by 7 proteins.  







eCLIP assay for RASSF7 is not avaliable on ENCORE database.





7 proteins are bound to RASSF7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11563335563388+3'-UTR,CDS,intron-Proximal4.037437.67357HepG2EFTUD2
chr11563889563951+3'-UTR4.982074.67936HepG2DDX55
chr11563304563376+3'-UTR,CDS,intron-Proximal3.619067.29769HepG2PRPF8
chr11563535563584+3'-UTR,CDS,intron-Proximal3.127373.98203HepG2PRPF8
chr11563379563425+3'-UTR,CDS,intron-Distal,intron-Proximal3.739113.79442K562AQR
chr11563334563474+3'-UTR,CDS,intron-Distal,intron-Proximal3.221527.17118HepG2PPIG
chr11563315563362+3'-UTR,CDS,intron-Proximal3.392405.66421K562PRPF8
chr11563521563603+3'-UTR,CDS,intron-Proximal4.314118.80047HepG2EFTUD2
chr11563316563368+3'-UTR,CDS,intron-Proximal4.823598.52787K562AQR
chr11563571563785+3'-UTR,CDS3.070956.45243HepG2UPF1
chr11563488563535+3'-UTR,intron-Proximal4.261773.70131HepG2PRPF8
chr11563307563377+3'-UTR,CDS,intron-Proximal4.559808.29703HepG2AQR
chr11562703562772+3'-UTR,CDS4.635664.38106HepG2PPIG
chr11563509563594+3'-UTR,CDS,intron-Proximal5.492118.83608K562AQR
chr11563482563575+3'-UTR,CDS,intron-Proximal4.608543.25089HepG2AQR
chr11561026561094+5'-UTR,intron-Distal,intron-Proximal4.092275.05356HepG2PRPF8
chr11561761561891+5'-UTR,CDS,intron-Distal,intron-Proximal3.323226.73521K562DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RASSF7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RASSF7 is not available on ENCORE database.

  • 88 RBPs can affect the levels of RASSF7.  








The Knockdown/knockout RNA-Seq assay for RASSF7 is not available on ENCORE database.





88 RBPs can affect the gene expression of RASSF7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RASSF7ENSG00000099849.10256.23930389.67710-0.604805.308004.44150HepG2CKAP4
RASSF7ENSG00000099849.10151.0024067.787901.155405.099904.19140HepG2CPSF6
RASSF7ENSG00000099849.10154.7222070.876201.126203.252902.14780HepG2YBX3
RASSF7ENSG00000099849.10256.78920142.721600.847306.543305.63480HepG2CELF1
RASSF7ENSG00000099849.10233.44290153.401300.605703.975303.11240HepG2DAZAP1
RASSF7ENSG00000099849.10222.75000360.47060-0.694506.722005.51080HepG2DDX19B
RASSF7ENSG00000099849.1050.01080108.83250-1.121802.743101.83540HepG2DDX24
RASSF7ENSG00000099849.10611.49530314.213900.960504.576103.78670HepG2DDX3X
RASSF7ENSG00000099849.10631.31390270.153301.224504.692603.90650HepG2DDX6
RASSF7ENSG00000099849.10214.82610372.89160-0.795607.081906.09410HepG2DKC1
RASSF7ENSG00000099849.10221.6818069.608801.671003.000102.27250HepG2DNAJC21
RASSF7ENSG00000099849.10221.5806068.974301.6836017.2171015.71850HepG2DNAJC2
RASSF7ENSG00000099849.10829.06520259.469701.675807.344806.41330HepG2EIF2S1
RASSF7ENSG00000099849.10278.67470145.013700.942306.796205.54660HepG2EIF4G2
RASSF7ENSG00000099849.10149.21810277.87310-0.897002.595801.53610HepG2ESF1
RASSF7ENSG00000099849.10215.43560303.62430-0.495002.513001.76250HepG2FUBP3
RASSF7ENSG00000099849.10197.45800108.264100.866902.233201.32230HepG2GNB2L1
RASSF7ENSG00000099849.10193.85480138.607400.483902.304301.64540HepG2HNRNPF
RASSF7ENSG00000099849.10288.66070139.718801.0467010.551309.31360HepG2HNRNPL
RASSF7ENSG00000099849.10142.1297073.329500.954603.498202.80030HepG2HNRNPLL
RASSF7ENSG00000099849.10144.6636077.645600.897601.813201.31320HepG2HNRNPU
RASSF7ENSG00000099849.10146.4693079.313500.884904.505503.58850HepG2ILF2
RASSF7ENSG00000099849.10268.67680356.28910-0.407202.643401.64420HepG2KIF1C
RASSF7ENSG00000099849.10474.93500298.024500.672201.964701.42620HepG2NCBP2
RASSF7ENSG00000099849.10381.76630152.115601.3274013.7098012.07220HepG2NOL12
RASSF7ENSG00000099849.1096.0659035.601901.432004.574802.74800HepG2NOLC1
RASSF7ENSG00000099849.10300.1061092.704501.694708.966007.32860HepG2PABPC1
RASSF7ENSG00000099849.10361.16670267.242500.434402.778702.17130HepG2PCBP1
RASSF7ENSG00000099849.10229.8108069.254801.730408.595607.34450HepG2PPIL4
RASSF7ENSG00000099849.1075.18510139.63420-0.893104.074303.15500HepG2PRPF4
RASSF7ENSG00000099849.10378.13580271.943100.475502.944902.38390HepG2PTBP1
RASSF7ENSG00000099849.10293.33530145.224101.014208.227907.27280HepG2PUF60
RASSF7ENSG00000099849.10245.93970154.181200.673603.199802.57300HepG2PUM1
RASSF7ENSG00000099849.10264.37320396.99170-0.586505.052504.26500HepG2PUS1
RASSF7ENSG00000099849.10224.24400118.010900.926004.200903.22370HepG2RPS2
RASSF7ENSG00000099849.10247.71220120.481801.039703.051901.92200HepG2RPS5
RASSF7ENSG00000099849.10196.0267069.150701.5031012.0078010.81210HepG2SAFB2
RASSF7ENSG00000099849.10378.85600245.230300.627403.397402.64750HepG2SF3A3
RASSF7ENSG00000099849.10119.0919072.579600.714302.164501.53530HepG2SF3B1
RASSF7ENSG00000099849.10372.36660283.102900.395302.267201.72530HepG2SF3B4
RASSF7ENSG00000099849.10300.87370139.287001.1110010.058608.85180HepG2SLBP
RASSF7ENSG00000099849.10174.0472080.648001.109706.757205.82050HepG2SMN1
RASSF7ENSG00000099849.10245.17540101.337701.274506.189804.71370HepG2SMNDC1
RASSF7ENSG00000099849.1097.32920295.50830-1.6023016.3113015.36690HepG2SRSF1
RASSF7ENSG00000099849.10267.27450143.410800.898107.484106.52270HepG2SRSF5
RASSF7ENSG00000099849.10188.22600362.71480-0.946403.201202.65900HepG2SSB
RASSF7ENSG00000099849.10209.4848088.847001.237402.953401.81300HepG2STIP1
RASSF7ENSG00000099849.10334.35390163.077801.035708.226707.25000HepG2SUCLG1
RASSF7ENSG00000099849.1056.13440265.64260-2.2425024.5537023.11080HepG2TAF15
RASSF7ENSG00000099849.10317.2893076.120002.0594029.4064027.80980HepG2TRIM56
RASSF7ENSG00000099849.10278.22690141.909400.971204.709703.53610HepG2TUFM
RASSF7ENSG00000099849.10168.32420277.06740-0.719002.207701.64010HepG2U2AF1
RASSF7ENSG00000099849.10451.05890150.229601.586002.959402.09560HepG2UBE2L3
RASSF7ENSG00000099849.10289.75360217.482700.413802.166001.53530HepG2UPF1
RASSF7ENSG00000099849.10316.9733091.400901.7940010.670108.56500HepG2XPO5
RASSF7ENSG00000099849.1075.99020137.79730-0.858703.732102.97150HepG2ZC3H8
RASSF7ENSG00000099849.10364.56420239.188100.607905.156904.46850HepG2ZNF622
RASSF7ENSG00000099849.10280.47190205.065400.451702.369501.83790K562AGGF1
RASSF7ENSG00000099849.10330.48650213.383500.631003.997803.21030K562AKAP8L
RASSF7ENSG00000099849.10350.13110530.84880-0.600403.570302.92000K562AQR
RASSF7ENSG00000099849.10374.92160156.521301.260102.900701.91930K562BCLAF1
RASSF7ENSG00000099849.10334.05620245.052800.446902.591601.46220K562CCDC124
RASSF7ENSG00000099849.10157.9043084.521400.901604.069202.50190K562CIRBP
RASSF7ENSG00000099849.10268.18220118.744801.175202.685801.64490K562CSTF2
RASSF7ENSG00000099849.10436.94590697.47850-0.674705.088803.75620K562CELF1
RASSF7ENSG00000099849.10223.07260137.183500.701304.018902.39580K562DDX27
RASSF7ENSG00000099849.10218.38020107.257601.025702.824601.90150K562EFTUD2
RASSF7ENSG00000099849.10480.10710319.160300.589005.166004.22710K562EIF2S2
RASSF7ENSG00000099849.1096.2252050.752900.922802.741501.94800K562EIF3G
RASSF7ENSG00000099849.102.2096025.36190-3.520804.767903.78180K562G3BP2
RASSF7ENSG00000099849.10149.1236082.882000.847303.759002.77060K562MAGOH
RASSF7ENSG00000099849.10266.33170356.41260-0.420302.335301.59080K562MTPAP
RASSF7ENSG00000099849.10150.28990248.56430-0.725904.215702.68440K562NCBP2
RASSF7ENSG00000099849.10121.8449073.737600.724502.321301.42980K562PCBP2
RASSF7ENSG00000099849.1091.46470178.86650-0.967602.651401.86980K562POLR2G
RASSF7ENSG00000099849.10356.22860169.495601.071509.514907.74280K562PPIG
RASSF7ENSG00000099849.10214.3810080.527901.4125011.4626010.17050K562PTBP1
RASSF7ENSG00000099849.10392.01720658.27530-0.747805.491503.94610K562PUM1
RASSF7ENSG00000099849.10298.61850206.186000.534303.120002.49590K562RBM15
RASSF7ENSG00000099849.10190.5676077.196101.303604.383003.29240K562RBM22
RASSF7ENSG00000099849.10238.35180106.236801.165703.895402.92420K562RPS19
RASSF7ENSG00000099849.10125.63820225.82990-0.846003.454001.67740K562RPS3A
RASSF7ENSG00000099849.10101.3920048.439301.065602.713301.71990K562RPS3
RASSF7ENSG00000099849.1041.4748084.38440-1.024702.548601.61600K562SF3B1
RASSF7ENSG00000099849.1016.3004046.60550-1.515603.211901.48240K562SND1
RASSF7ENSG00000099849.10291.19110400.35420-0.459303.218402.21590K562SRPK2
RASSF7ENSG00000099849.10172.8133078.948401.130102.171601.53690K562SRSF1
RASSF7ENSG00000099849.1095.8981046.737501.036802.836101.76770K562SRSF4
RASSF7ENSG00000099849.10166.8893074.571201.162106.467004.74860K562SRSF5
RASSF7ENSG00000099849.10230.3613079.891801.5277012.1656010.49540K562TARDBP
RASSF7ENSG00000099849.10187.2084077.067101.280404.498103.41560K562TIA1
RASSF7ENSG00000099849.10171.8338075.647201.183604.104702.73130K562TRA2A
RASSF7ENSG00000099849.104.3652025.37160-2.539103.620302.69970K562U2AF2
RASSF7ENSG00000099849.10272.69180373.61720-0.454303.132802.23480K562WDR43
RASSF7ENSG00000099849.10101.06550219.89210-1.121503.932301.88840K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RASSF7 is not available on ENCORE database.





1 RBPs can affect the splicing of RASSF7 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
RIRASSF7ENSG00000099849.10chr11+5631885634785631885633175633955634780.299000.001150.04066includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RASSF7 is not avaliable on ENCORE database.