PARP16

General Information

Gene Name       : PARP16
Gene ID             : ENSG00000138617.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PARP16)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PARP16ENSG00000138617.158.198.108.14ENCSR000AEF
HepG2PARP16ENSG00000138617.156.147.917.03ENCSR985KAT
K562PARP16ENSG00000138617.155.966.636.29ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PARP16 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PARP16 RNA is bound by 7 proteins.  







eCLIP assay for PARP16 is not avaliable on ENCORE database.





7 proteins are bound to PARP16 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr156555145565551581-3'-UTR,intron-Distal,intron-Proximal3.9164110.81363K562YBX3
chr156555114165551184-3'-UTR,intron-Distal3.239893.06830K562UPF1
chr156555084065550918-3'-UTR,intron-Distal4.248573.56427K562FAM120A
chr156555089365550987-3'-UTR,intron-Distal5.0116812.96016K562UPF1
chr156555136765551433-3'-UTR,intron-Distal4.140384.77486K562YBX3
chr156555051365550600-3'-UTR,intron-Distal3.389406.98582K562UPF1
chr156555083965550893-3'-UTR,intron-Distal4.1144710.12876K562UPF1
chr156557868165578721-CDS,intron-Distal,intron-Proximal4.358843.10925K562DGCR8
chr156555557365555623-CDS,intron-Distal3.869373.43253K562YBX3
chr156557783865577863-intron-Distal6.76873400.00000HepG2DKC1
chr156557783265577838-intron-Distal6.53298400.00000HepG2DKC1
chr156557789565577902-intron-Distal6.22462400.00000HepG2DKC1
chr156557790265577921-intron-Distal5.6584369.76447HepG2DKC1
chr156559274065592826-intron-Distal4.247314.23812HepG2LSM11
chr156557786365577872-intron-Distal7.5701792.14918HepG2DKC1
chr156557787365577889-intron-Distal6.74607400.00000HepG2DKC1
chr156557782465577929-intron-Distal3.0209920.89695HepG2NOLC1
chr156559282665592931-intron-Distal4.3070213.03471HepG2LSM11
chr156557792165577929-intron-Distal5.2804419.18783HepG2DKC1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PARP16 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PARP16 is not available on ENCORE database.

  • 61 RBPs can affect the levels of PARP16.  








The Knockdown/knockout RNA-Seq assay for PARP16 is not available on ENCORE database.





61 RBPs can affect the gene expression of PARP16 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PARP16ENSG00000138617.10174.91720298.43570-0.770704.286503.31840HepG2ASCC1
PARP16ENSG00000138617.10144.37850274.10700-0.924904.653203.68420HepG2CALR
PARP16ENSG00000138617.10111.91620256.46860-1.196406.354405.19520HepG2CNOT7
PARP16ENSG00000138617.10208.46140345.51020-0.728904.210403.45190HepG2DDX3X
PARP16ENSG00000138617.10450.11010315.319600.513402.724202.08970HepG2EIF4A3
PARP16ENSG00000138617.10146.94430306.99740-1.063005.932404.95290HepG2EIF4B
PARP16ENSG00000138617.10163.01030295.11880-0.856305.119404.22630HepG2G3BP1
PARP16ENSG00000138617.10131.91200281.51040-1.093603.663502.52980HepG2IGF2BP3
PARP16ENSG00000138617.10173.01660309.64340-0.839704.613702.77180HepG2NKRF
PARP16ENSG00000138617.10267.65220192.844800.472802.489801.78680HepG2PPIL4
PARP16ENSG00000138617.10245.37630330.90080-0.431402.571501.99490HepG2PUM1
PARP16ENSG00000138617.10140.27290330.65190-1.2371011.5174010.19960HepG2PUM2
PARP16ENSG00000138617.10190.91960315.95060-0.726704.763103.97680HepG2QKI
PARP16ENSG00000138617.10174.72130268.07650-0.617602.747701.75880HepG2RBM27
PARP16ENSG00000138617.10215.94890324.68580-0.588403.596302.99590HepG2NELFE
PARP16ENSG00000138617.10173.54840247.24160-0.510602.011501.32130HepG2RPS2
PARP16ENSG00000138617.10196.76960303.73180-0.626303.867503.18740HepG2SF3B4
PARP16ENSG00000138617.10230.23240307.77780-0.418802.106101.55120HepG2SRSF5
PARP16ENSG00000138617.10365.19470283.080700.367402.125701.66060HepG2SSB
PARP16ENSG00000138617.10182.95030284.99590-0.639503.871403.22680HepG2TAF15
PARP16ENSG00000138617.10350.89100261.843000.422202.422601.63900HepG2TIA1
PARP16ENSG00000138617.10299.27980210.092900.510402.789302.28700HepG2TIAL1
PARP16ENSG00000138617.10114.32750242.93450-1.087406.086604.55110HepG2XRCC6
PARP16ENSG00000138617.10562.26170364.323500.625904.672203.05950K562ABCF1
PARP16ENSG00000138617.10394.54560542.36350-0.459102.883401.61740K562APOBEC3C
PARP16ENSG00000138617.10841.92800689.973500.287102.447801.59250K562ATP5C1
PARP16ENSG00000138617.10521.07820307.324000.761605.968304.67620K562BOP1
PARP16ENSG00000138617.10320.17600193.973000.722904.475703.07380K562CCAR1
PARP16ENSG00000138617.10940.54900755.158500.316602.688201.53220K562CCDC124
PARP16ENSG00000138617.10507.16080351.543900.528604.111902.25320K562CEBPZ
PARP16ENSG00000138617.10629.63550326.765400.9462011.555309.93700K562CPSF6
PARP16ENSG00000138617.10932.03990755.702300.302502.314301.42240K562CELF1
PARP16ENSG00000138617.10583.49250404.062400.530004.747703.13540K562DDX21
PARP16ENSG00000138617.10333.08180197.302300.755403.238502.14270K562EIF3A
PARP16ENSG00000138617.10273.17290384.00520-0.491303.488502.16530K562EIF4B
PARP16ENSG00000138617.10442.80240307.695300.525103.664002.17980K562EXOSC5
PARP16ENSG00000138617.10549.91380332.491800.725806.096704.81460K562FMR1
PARP16ENSG00000138617.10462.09640281.823600.713304.991603.72260K562FTO
PARP16ENSG00000138617.10172.57330443.45020-1.3616018.8559017.38620K562FXR1
PARP16ENSG00000138617.10456.29270311.974000.548403.520302.62890K562GPKOW
PARP16ENSG00000138617.10455.11410303.096100.586404.027303.32340K562HNRNPC
PARP16ENSG00000138617.10374.49960500.05110-0.417102.637801.60950K562HNRNPL
PARP16ENSG00000138617.10523.91800355.059900.561203.760502.83780K562HSPD1
PARP16ENSG00000138617.10316.45900437.13760-0.466102.616201.79910K562MAGOH
PARP16ENSG00000138617.10443.85400304.524200.543403.520802.52670K562METAP2
PARP16ENSG00000138617.10500.28570376.053800.411703.016402.17380K562MTPAP
PARP16ENSG00000138617.10574.26590417.845800.458604.099003.21040K562NSUN2
PARP16ENSG00000138617.10248.91570388.98870-0.644104.198502.98750K562PCBP2
PARP16ENSG00000138617.10162.26590240.54150-0.567902.356601.66210K562PRPF8
PARP16ENSG00000138617.10186.70780424.68830-1.1856011.5983010.29900K562PTBP1
PARP16ENSG00000138617.10435.40150670.63600-0.623205.001003.90640K562PUF60
PARP16ENSG00000138617.10247.25780407.35870-0.720305.356704.14210K562RBM22
PARP16ENSG00000138617.10218.03320428.64870-0.975208.064306.13000K562NELFE
PARP16ENSG00000138617.10371.17750244.999700.599203.001002.14990K562RPS19
PARP16ENSG00000138617.10232.66840394.23730-0.760804.848903.70260K562SF3B4
PARP16ENSG00000138617.10316.47750213.634200.566903.086801.74740K562SLBP
PARP16ENSG00000138617.10256.78370416.30870-0.697105.364504.38660K562SRSF1
PARP16ENSG00000138617.10370.92990272.673500.443902.767701.49270K562SSB
PARP16ENSG00000138617.10808.80870463.809300.802203.139801.58700K562SUPT6H
PARP16ENSG00000138617.10257.14470421.39060-0.712605.282304.28760K562TARDBP
PARP16ENSG00000138617.10417.84420261.387900.676704.356003.16260K562TIAL1
PARP16ENSG00000138617.10388.59780277.728600.484502.700401.76820K562TRIM56
PARP16ENSG00000138617.10617.66860443.049500.479304.665903.75800K562UPF1
PARP16ENSG00000138617.10586.66420379.105500.629805.729704.44840K562WDR3
PARP16ENSG00000138617.10525.67700394.211300.415102.681901.84790K562WDR43
PARP16ENSG00000138617.10164.15520314.38200-0.937504.329002.21960K562XRCC6
PARP16ENSG00000138617.10674.11580503.436300.421103.080702.16610K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PARP16 is not available on ENCORE database.





1 RBPs can affect the splicing of PARP16 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPARP16ENSG00000138617.10chr15-655588996555910665555486655556586556327265563410-0.238000.001510.05937excludedHepG2HNRNPU

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PARP16 is not avaliable on ENCORE database.