MFSD8

General Information

Gene Name       : MFSD8
Gene ID             : ENSG00000164073.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MFSD8)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MFSD8ENSG00000164073.109.998.619.30ENCSR000AEF
HepG2MFSD8ENSG00000164073.107.2914.3010.79ENCSR985KAT
K562MFSD8ENSG00000164073.108.318.028.16ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MFSD8 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MFSD8 RNA is bound by 12 proteins.  







eCLIP assay for MFSD8 is not avaliable on ENCORE database.





12 proteins are bound to MFSD8 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4128851833128851906-3'-UTR,CDS,intron-Distal,intron-Proximal4.665309.30195HepG2BCLAF1
chr4128851913128851959-3'-UTR,CDS,intron-Distal4.0486612.50436HepG2BCLAF1
chr4128851959128851973-3'-UTR,CDS,intron-Distal,intron-Proximal4.8035810.80414HepG2BCLAF1
chr4128854138128854174-3'-UTR,CDS,intron-Distal,intron-Proximal3.018918.01569HepG2BCLAF1
chr4128870955128871003-CDS,intron-Distal,intron-Proximal3.189435.14791HepG2BCLAF1
chr4128841963128841997-CDS,intron-Distal4.8501822.41722HepG2U2AF2
chr4128842709128842866-CDS,intron-Distal,intron-Proximal3.212877.33264HepG2GRWD1
chr4128841986128842017-CDS,intron-Distal3.344743.93230HepG2U2AF1
chr4128865063128865123-CDS,intron-Distal4.080344.93978HepG2BCLAF1
chr4128863150128863210-CDS,intron-Distal,intron-Proximal4.515954.53454K562PRPF8
chr4128859954128859993-CDS,intron-Distal3.491343.68471HepG2BCLAF1
chr4128841960128841986-CDS,intron-Distal4.372325.54761HepG2U2AF1
chr4128841982128842085-CDS,intron-Distal4.290805.41654K562KHSRP
chr4128870930128871007-CDS,intron-Distal,intron-Proximal4.114913.56076K562BUD13
chr4128843732128843765-intron-Distal4.463185.84676HepG2HNRNPC
chr4128845477128845553-intron-Distal4.618215.76606K562EXOSC5
chr4128868793128868851-intron-Distal3.540867.65224HepG2PTBP1
chr4128854029128854092-intron-Distal,intron-Proximal3.215273.96958K562KHSRP
chr4128842331128842384-intron-Distal4.556889.87931HepG2U2AF2
chr4128842177128842230-intron-Distal4.7700910.31463HepG2U2AF2
chr4128868969128869041-intron-Distal4.021133.91772K562TARDBP
chr4128841997128842015-intron-Distal4.7220821.54262HepG2U2AF2
chr4128853953128854012-intron-Distal4.292263.42844K562KHSRP
chr4128868784128868881-intron-Distal4.527107.08067K562PTBP1
chr4128860116128860198-intron-Distal4.334715.02888K562KHSRP
chr4128864318128864376-intron-Distal3.623613.15106HepG2HNRNPC
chr4128864747128864864-intron-Distal,intron-Proximal3.470163.33412HepG2HNRNPL
chr4128843765128843784-intron-Distal3.362694.81055HepG2HNRNPC
chr4128846193128846237-intron-Distal4.683845.76606K562EXOSC5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MFSD8 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MFSD8 is not available on ENCORE database.

  • 56 RBPs can affect the levels of MFSD8.  








The Knockdown/knockout RNA-Seq assay for MFSD8 is not available on ENCORE database.





56 RBPs can affect the gene expression of MFSD8 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MFSD8ENSG00000164073.5345.28210442.50290-0.357902.450901.87240HepG2ACO1
MFSD8ENSG00000164073.5329.04180444.63890-0.434403.176602.36120HepG2AKAP8L
MFSD8ENSG00000164073.5508.18490227.024801.1624012.6453011.29560HepG2CPSF6
MFSD8ENSG00000164073.5451.96080658.87790-0.543805.909605.03780HepG2CELF1
MFSD8ENSG00000164073.5581.48830708.55440-0.285102.567401.84880HepG2DAZAP1
MFSD8ENSG00000164073.5475.89700363.420500.388902.256901.44200HepG2DDX24
MFSD8ENSG00000164073.5477.48630354.415900.429902.370901.43380HepG2DDX5
MFSD8ENSG00000164073.5300.12920474.04740-0.659403.978503.24860HepG2DDX6
MFSD8ENSG00000164073.5438.31330292.142000.585204.098302.92110HepG2DHX30
MFSD8ENSG00000164073.5624.28250423.373100.560205.792804.87860HepG2DKC1
MFSD8ENSG00000164073.5615.45760455.815100.433102.477201.91430HepG2EIF2S1
MFSD8ENSG00000164073.5886.51320503.778500.815307.807406.73470HepG2EIF4A3
MFSD8ENSG00000164073.5474.43410339.191700.484003.246502.06670HepG2ESF1
MFSD8ENSG00000164073.51046.74870739.866200.500506.660805.79530HepG2ETF1
MFSD8ENSG00000164073.5261.10650395.27030-0.598202.027801.36270HepG2FIP1L1
MFSD8ENSG00000164073.5439.57400227.408300.950703.663102.48880HepG2FTO
MFSD8ENSG00000164073.5357.86690220.593700.697904.940603.90360HepG2FUBP3
MFSD8ENSG00000164073.5689.05110500.407400.461402.863901.95400HepG2G3BP2
MFSD8ENSG00000164073.5377.48510257.357800.552502.760402.11960HepG2GPKOW
MFSD8ENSG00000164073.5740.87120460.996300.684403.533001.94260HepG2HLTF
MFSD8ENSG00000164073.5419.22780305.797400.455102.430901.82300HepG2HNRNPA1
MFSD8ENSG00000164073.5464.19440340.142200.448502.469001.81090HepG2HNRNPC
MFSD8ENSG00000164073.5530.66070645.46880-0.282602.334801.70830HepG2HNRNPL
MFSD8ENSG00000164073.5474.30730245.600600.949408.149507.13260HepG2HNRNPLL
MFSD8ENSG00000164073.5724.29610479.251500.595704.560503.71310HepG2IGF2BP2
MFSD8ENSG00000164073.5447.36310345.147100.374102.815502.07780HepG2ILF2
MFSD8ENSG00000164073.51064.13680508.319101.0658014.1958012.76070HepG2MAGOH
MFSD8ENSG00000164073.5422.51350320.096800.400402.476001.70890HepG2MSI2
MFSD8ENSG00000164073.5457.72840250.464400.869804.810903.50960HepG2MTPAP
MFSD8ENSG00000164073.5513.67730702.59570-0.451804.250303.30500HepG2NOL12
MFSD8ENSG00000164073.5362.83830217.766500.736404.757103.78600HepG2NSUN2
MFSD8ENSG00000164073.5327.16150252.755000.372202.088701.40850HepG2PRPF4
MFSD8ENSG00000164073.5505.86170711.90490-0.492906.511005.68110HepG2PUM1
MFSD8ENSG00000164073.5554.49800450.728000.298802.127001.56940HepG2PUS1
MFSD8ENSG00000164073.5662.17620461.704000.520104.606503.83050HepG2QKI
MFSD8ENSG00000164073.5828.03720419.028000.9825011.171609.87660HepG2RBM25
MFSD8ENSG00000164073.5658.76980441.884800.576006.173205.30240HepG2RECQL
MFSD8ENSG00000164073.5614.35810436.236800.493902.542601.77500HepG2RPS3A
MFSD8ENSG00000164073.5343.57300243.100400.499002.548801.86940HepG2SF3B1
MFSD8ENSG00000164073.5655.31780443.844100.562005.822205.01770HepG2SF3B4
MFSD8ENSG00000164073.5491.16820270.490200.860505.048603.98350HepG2SNRNP70
MFSD8ENSG00000164073.5593.36220463.279000.356902.580702.11990HepG2SRSF1
MFSD8ENSG00000164073.5932.63450606.426100.620909.829508.97720HepG2SSB
MFSD8ENSG00000164073.5549.84030753.07110-0.453802.867702.23700HepG2SUCLG1
MFSD8ENSG00000164073.5563.24250393.896500.515802.615001.95510HepG2SUPV3L1
MFSD8ENSG00000164073.5730.59180416.418100.8109011.2222010.21280HepG2TAF15
MFSD8ENSG00000164073.5374.43270239.364800.645404.050303.19240HepG2TARDBP
MFSD8ENSG00000164073.5604.66010382.626300.660106.255005.00400HepG2TIA1
MFSD8ENSG00000164073.5207.80750331.26150-0.672705.320204.58920HepG2TRIM56
MFSD8ENSG00000164073.5528.90390693.43740-0.390802.141001.41020HepG2UBE2L3
MFSD8ENSG00000164073.5298.80950459.88240-0.622005.842005.02550HepG2UTP3
MFSD8ENSG00000164073.5331.79000249.421500.411602.504601.86030HepG2ZC3H8
MFSD8ENSG00000164073.5432.47440523.87650-0.276601.927901.44930HepG2ZNF622
MFSD8ENSG00000164073.5293.56320383.42020-0.385302.176901.66290K562AGGF1
MFSD8ENSG00000164073.5260.08800359.26390-0.466002.888901.53970K562BCCIP
MFSD8ENSG00000164073.5320.70750420.37340-0.390402.315501.31240K562CPEB4
MFSD8ENSG00000164073.5410.24520296.724700.467302.670601.86500K562EIF4A3
MFSD8ENSG00000164073.5508.70660337.286200.592802.173101.55670K562G3BP2
MFSD8ENSG00000164073.5864.99860682.773200.341202.478701.47200K562PUM1
MFSD8ENSG00000164073.5260.30030350.97630-0.431202.410201.61520K562SF3B4
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MFSD8 is not available on ENCORE database.





2 RBPs can affect the splicing of MFSD8 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMFSD8ENSG00000164073.5chr4-1288430141288431181288426781288429261288518371288519720.448000.000020.00382includedHepG2DDX3X
MXEMFSD8ENSG00000164073.5chr4-128843014128843118128851837128851972128842678128842926128854139128854248-0.191000.002430.098492includedHepG2DDX3X
MXEMFSD8ENSG00000164073.5chr4-128843014128843118128851837128851972128842678128842926128854139128854248-0.350000.002630.047662includedK562PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MFSD8 is not avaliable on ENCORE database.