MALSU1

General Information

Gene Name       : MALSU1
Gene ID             : ENSG00000156928.4
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: MALSU1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MALSU1ENSG00000156928.415.5921.5018.55ENCSR000AEF
HepG2MALSU1ENSG00000156928.475.9561.9468.94ENCSR985KAT
K562MALSU1ENSG00000156928.459.9032.4346.16ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MALSU1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MALSU1 RNA is bound by 16 proteins.  







eCLIP assay for MALSU1 is not avaliable on ENCORE database.





16 proteins are bound to MALSU1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr72334918123349265+3'-UTR3.963053.70058K562CSTF2T
chr72334917723349316+3'-UTR4.208273.69311HepG2CSTF2
chr72333896423339016+5'-UTR,CDS,intron-Distal3.615704.47117K562DDX3X
chr72333896223339015+5'-UTR,CDS,intron-Distal6.8611410.46216HepG2DDX3X
chr72334910923349159+CDS4.756016.79809K562PABPC4
chr72333918123339278+CDS,intron-Distal,intron-Proximal3.952219.65424HepG2BUD13
chr72333917523339226+CDS,intron-Distal3.635783.22721K562YBX3
chr72333901623339104+CDS,intron-Distal3.498713.49390K562DROSHA
chr72334053323340637+CDS,intron-Proximal4.4131010.09915K562YBX3
chr72334046823340560+CDS3.480305.28199HepG2GRWD1
chr72333901723339083+CDS,intron-Distal4.4803510.17596K562DDX3X
chr72334040523340531+CDS,intron-Proximal3.408275.93043HepG2AQR
chr72334910523349150+CDS4.136093.06595HepG2BCLAF1
chr72333903123339223+CDS,intron-Distal3.324106.08453K562FTO
chr72333921923339276+CDS,intron-Distal,intron-Proximal3.141264.50321HepG2PRPF8
chr72333912923339201+CDS,intron-Distal5.090628.28112K562RBM15
chr72334752523347604+CDS,intron-Proximal4.898278.11807HepG2PRPF8
chr72334899623349146+CDS4.106134.67436K562GRWD1
chr72334040423340556+CDS,intron-Proximal3.088683.26275K562BUD13
chr72333910223339179+CDS,intron-Distal4.251055.01580HepG2DDX3X
chr72333902523339086+CDS,intron-Distal4.6071420.82128HepG2DDX3X
chr72334748423347566+CDS,intron-Proximal3.202955.58482K562YBX3
chr72334671023346794+intron-Distal3.888946.40934HepG2HNRNPM
chr72334653523346572+intron-Distal3.944255.50914K562EXOSC5
chr72334469423344777+intron-Distal3.269505.98150K562EXOSC5
chr72334457423344603+intron-Distal3.118213.14999K562EXOSC5
chr72334485223344932+intron-Distal3.651774.91037K562EXOSC5
chr72334605323346103+intron-Distal3.677544.61282K562EXOSC5
chr72334647923346535+intron-Distal3.618214.91094K562EXOSC5
chr72334842423348468+intron-Distal4.041456.35159HepG2RBFOX2
chr72334673323346769+intron-Distal4.283293.01456K562EXOSC5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MALSU1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MALSU1 is not available on ENCORE database.

  • 55 RBPs can affect the levels of MALSU1.  








The Knockdown/knockout RNA-Seq assay for MALSU1 is not available on ENCORE database.





55 RBPs can affect the gene expression of MALSU1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MALSU1ENSG00000156928.4871.61260579.556200.588603.872402.77030HepG2ABCF1
MALSU1ENSG00000156928.4737.05450510.273700.530406.186105.08240HepG2AKAP8L
MALSU1ENSG00000156928.4859.29210600.627500.516603.940803.02730HepG2CIRBP
MALSU1ENSG00000156928.4668.84330507.775500.397403.965603.19670HepG2CKAP4
MALSU1ENSG00000156928.4231.07090394.17980-0.770505.208104.29150HepG2CPSF6
MALSU1ENSG00000156928.4588.49830744.93870-0.340103.292702.49570HepG2DAZAP1
MALSU1ENSG00000156928.4390.48370628.68170-0.687104.819504.02480HepG2DDX6
MALSU1ENSG00000156928.4721.06070485.915700.569306.559105.60090HepG2DKC1
MALSU1ENSG00000156928.4295.32330442.47980-0.583303.959303.02730HepG2FUBP3
MALSU1ENSG00000156928.4435.11460632.94240-0.540703.816403.00690HepG2HNRNPK
MALSU1ENSG00000156928.4389.90930678.57260-0.7994012.4601011.12400HepG2HNRNPL
MALSU1ENSG00000156928.4600.51380426.427800.493803.103702.44170HepG2HNRNPLL
MALSU1ENSG00000156928.4609.99830477.276700.353902.217001.56440HepG2IGF2BP1
MALSU1ENSG00000156928.4877.87800677.908900.372802.053601.50420HepG2MATR3
MALSU1ENSG00000156928.4470.90810738.68130-0.649507.520106.28010HepG2NOL12
MALSU1ENSG00000156928.4476.97490627.03470-0.394603.495902.83120HepG2PCBP1
MALSU1ENSG00000156928.4432.09780638.01220-0.562205.794105.06120HepG2PTBP1
MALSU1ENSG00000156928.4598.96750748.55220-0.321602.936302.32920HepG2PUM1
MALSU1ENSG00000156928.4565.26400747.99910-0.404103.163302.44610HepG2PUM2
MALSU1ENSG00000156928.4442.37080691.02370-0.643506.952106.02730HepG2QKI
MALSU1ENSG00000156928.4563.50510715.42310-0.344402.587002.08170HepG2RBM22
MALSU1ENSG00000156928.4463.14690627.13300-0.437303.231802.50900HepG2RBM25
MALSU1ENSG00000156928.4586.76010380.752200.623803.602902.39170HepG2RCC2
MALSU1ENSG00000156928.4527.23400661.29760-0.326902.530601.93750HepG2RECQL
MALSU1ENSG00000156928.4666.13530522.187500.351102.026601.43110HepG2RPLP0
MALSU1ENSG00000156928.4607.59720409.111500.570502.917601.95000HepG2RPS10
MALSU1ENSG00000156928.4895.68450640.102600.484603.067902.35770HepG2SF3A3
MALSU1ENSG00000156928.4658.04670808.04750-0.296302.543102.05560HepG2SRFBP1
MALSU1ENSG00000156928.4871.39360693.358100.329602.950902.46660HepG2SRSF1
MALSU1ENSG00000156928.4384.44870564.07170-0.553105.935105.18280HepG2SRSF9
MALSU1ENSG00000156928.41303.10450701.582700.8932022.9492021.78760HepG2SSB
MALSU1ENSG00000156928.4511.33880791.80590-0.630905.514304.69110HepG2SUCLG1
MALSU1ENSG00000156928.4479.93150623.17850-0.376802.912602.33880HepG2TAF15
MALSU1ENSG00000156928.4431.30710572.65740-0.409002.920202.06300HepG2TIA1
MALSU1ENSG00000156928.4247.84700611.30210-1.302404.414203.15730HepG2U2AF2
MALSU1ENSG00000156928.4520.39340729.21420-0.486702.707401.87900HepG2UBE2L3
MALSU1ENSG00000156928.4634.40290387.998500.709202.441001.50200HepG2UPF2
MALSU1ENSG00000156928.4751.89810624.332000.268102.337501.82250HepG2ZNF622
MALSU1ENSG00000156928.4538.49320393.126600.453802.834002.25970K562AGGF1
MALSU1ENSG00000156928.4547.26510429.185100.350502.288901.46610K562ATP5C1
MALSU1ENSG00000156928.4290.97770410.83940-0.497703.214502.36800K562CPSF6
MALSU1ENSG00000156928.4613.61820440.226300.479004.191003.08250K562DKC1
MALSU1ENSG00000156928.4390.55800557.49810-0.513404.594803.69690K562EIF2S2
MALSU1ENSG00000156928.4258.99060354.26690-0.451902.132301.33460K562FTO
MALSU1ENSG00000156928.4587.14150332.761100.819109.989108.92340K562FXR1
MALSU1ENSG00000156928.4394.21350280.776700.489502.169601.55430K562G3BP2
MALSU1ENSG00000156928.4277.16210383.94620-0.470202.535001.96050K562HNRNPC
MALSU1ENSG00000156928.4461.42280616.98570-0.419104.030103.14730K562NSUN2
MALSU1ENSG00000156928.4351.27640536.29350-0.610402.499801.34030K562PABPC1
MALSU1ENSG00000156928.4753.23320554.794100.441003.219102.32240K562PPIG
MALSU1ENSG00000156928.4243.25620344.24620-0.501002.661401.77740K562PSIP1
MALSU1ENSG00000156928.4228.01530314.07140-0.462002.268101.37510K562RCC2
MALSU1ENSG00000156928.4482.69810608.82800-0.334902.551701.76700K562SF3A3
MALSU1ENSG00000156928.4199.45850297.73220-0.577902.870401.81930K562SRFBP1
MALSU1ENSG00000156928.4549.12760373.240300.556904.530903.62940K562SRSF1
MALSU1ENSG00000156928.4188.63330346.80740-0.878605.710904.21620K562SUPV3L1
MALSU1ENSG00000156928.4213.39450331.10830-0.633803.382402.34280K562TIAL1
MALSU1ENSG00000156928.4223.62460351.75010-0.653503.930802.76170K562TRIM56
MALSU1ENSG00000156928.4845.373301084.98470-0.360003.143601.64280K562UBE2L3
MALSU1ENSG00000156928.4234.39440367.04910-0.647003.829902.61350K562UCHL5
MALSU1ENSG00000156928.4501.82880654.20410-0.382503.372802.58440K562UPF1
MALSU1ENSG00000156928.4387.12520559.78000-0.532104.267003.17090K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MALSU1 is not available on ENCORE database.





11 RBPs can affect the splicing of MALSU1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMALSU1ENSG00000156928.4chr7+233474862334756823340457233406362334897423351348-0.058000.002540.04389excludedK562SF3B4
SEMALSU1ENSG00000156928.4chr7+233474862334767423340457233406362334897423351348-0.059000.001970.06162excludedK562PRPF8
SEMALSU1ENSG00000156928.4chr7+233474862334756823340457233406362334897423351348-0.059000.000220.08612excludedK562TIA1
SEMALSU1ENSG00000156928.4chr7+233474862334767423340457233406362334897423349194-0.070000.000290.07046excludedK562WDR43
SEMALSU1ENSG00000156928.4chr7+233474862334756823340457233406362334897423351348-0.187000.000000.00000excludedK562PUS1
SEMALSU1ENSG00000156928.4chr7+2334759423347674233404572334063623348974233491940.466000.006120.08458includedK562U2AF2
SEMALSU1ENSG00000156928.4chr7+233474862334756823340457233406362334897423351348-0.129000.000000.00000excludedK562TARDBP
A3SSMALSU1ENSG00000156928.4chr7+233474862334760923347594233476092334045723340636-0.165000.000000.00013shorterK562U2AF2
A3SSMALSU1ENSG00000156928.4chr7+233474862334760923347594233476092334045723340636-0.262000.000000.00000shorterHepG2U2AF2
A3SSMALSU1ENSG00000156928.4chr7+233474862334760923347594233476092334045723340636-0.106000.000010.00056shorterHepG2U2AF1
A5SSMALSU1ENSG00000156928.4chr7+2334742923347674233474292334756823348974233491940.065000.000000.00000longerK562AQR
A5SSMALSU1ENSG00000156928.4chr7+2334748623347674233474862334756823348974233513480.063000.000000.00071longerHepG2U2AF1
MXEMALSU1ENSG00000156928.4chr7+2334748623347568233475942334767423340457233406362334897423351348-0.079000.000000.000002includedHepG2U2AF1
MXEMALSU1ENSG00000156928.4chr7+2334045723340636233474862334767423338957233392272334897423351348-0.118000.000010.000482includedHepG2U2AF1
MXEMALSU1ENSG00000156928.4chr7+2334045723340636233475942334767423338957233392272334897423351348-0.129000.000010.000482includedHepG2U2AF1
MXEMALSU1ENSG00000156928.4chr7+23340457233406362334748623347568233388182333922723348974233513480.231000.000000.000001includedK562TARDBP
MXEMALSU1ENSG00000156928.4chr7+23340457233406362334748623347568233388182333922723348974233513480.130000.001020.063131includedK562RBM22
MXEMALSU1ENSG00000156928.4chr7+23340457233406362334748623347568233388182333922723348974233513480.164000.000040.004271includedK562TIA1
MXEMALSU1ENSG00000156928.4chr7+23340457233406362334748623347568233388182333922723348974233513480.174000.000020.002211includedK562IGF2BP2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MALSU1 is not avaliable on ENCORE database.