MAGI3

General Information

Gene Name       : MAGI3
Gene ID             : ENSG00000081026.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MAGI3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MAGI3ENSG00000081026.180.340.190.27ENCSR000AEF
HepG2MAGI3ENSG00000081026.184.206.785.49ENCSR985KAT
K562MAGI3ENSG00000081026.182.613.783.19ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MAGI3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MAGI3 RNA is bound by 21 proteins.  







eCLIP assay for MAGI3 is not avaliable on ENCORE database.





21 proteins are bound to MAGI3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1113933545113933661+5'-UTR,CDS3.767634.51666K562RBM15
chr1113933392113933458+5'-UTR3.436563.54074K562RBM15
chr1113933503113933620+5'-UTR3.075723.73413HepG2PPIG
chr1114162358114162454+CDS,intron-Proximal3.852507.23562HepG2BCLAF1
chr1114201781114201811+CDS3.991343.06595HepG2BCLAF1
chr1114128070114128168+CDS4.054106.23296HepG2BCLAF1
chr1114137138114137181+CDS4.533783.89826HepG2BCLAF1
chr1114133121114133168+CDS4.491344.34038HepG2BCLAF1
chr1114184816114184869+CDS4.026883.02457HepG2BCLAF1
chr1113933968113934027+CDS,intron-Proximal4.708594.13847K562AQR
chr1114165427114165468+CDS,intron-Proximal3.567343.68471HepG2BCLAF1
chr1114123213114123265+CDS4.406384.34038HepG2BCLAF1
chr1114165545114165618+CDS,intron-Proximal4.107205.36555HepG2BCLAF1
chr1114128092114128203+CDS3.031183.41665HepG2GRWD1
chr1114184533114184607+CDS4.723045.23259HepG2BCLAF1
chr1114196573114196633+CDS4.554104.78529HepG2BCLAF1
chr1113934864113934920+intron-Distal3.426893.42785HepG2HNRNPM
chr1114029143114029194+intron-Distal3.903793.01456K562EXOSC5
chr1113962286113962364+intron-Distal3.384073.46325HepG2SUGP2
chr1114053368114053430+intron-Distal4.628815.31925HepG2QKI
chr1114008422114008454+intron-Distal4.686976.08869K562EXOSC5
chr1114027333114027418+intron-Distal6.0902232.18475HepG2PCBP2
chr1114020581114020668+intron-Distal5.2234610.02324HepG2SUGP2
chr1113968949113969035+intron-Distal3.375223.90146K562KHSRP
chr1113960950113961043+intron-Distal3.503776.07779HepG2SUGP2
chr1114007362114007412+intron-Distal4.257803.80778HepG2QKI
chr1114027328114027427+intron-Distal6.9518820.89654HepG2DDX59
chr1113962402113962480+intron-Distal3.936303.29248HepG2SUGP2
chr1113980554113980610+intron-Distal4.723355.07733HepG2PTBP1
chr1114010006114010136+intron-Distal4.238363.27946HepG2HNRNPM
chr1114027957114028003+intron-Distal4.007023.01445K562EXOSC5
chr1113980740113980781+intron-Distal3.582344.57279K562PTBP1
chr1114057422114057498+intron-Distal4.137394.86595HepG2CSTF2
chr1114009164114009211+intron-Distal4.042217.01277K562EXOSC5
chr1114053131114053227+intron-Distal3.474753.35103HepG2QKI
chr1114019712114019766+intron-Distal3.037334.67779HepG2SUGP2
chr1114009281114009328+intron-Distal4.111673.27829HepG2MATR3
chr1114022935114023146+intron-Distal5.0364327.01071HepG2SUGP2
chr1114149278114149397+intron-Distal4.732046.23638HepG2QKI
chr1113934540113934589+intron-Distal4.953306.87194K562HNRNPM
chr1114022773114022845+intron-Distal3.143825.36060HepG2SUGP2
chr1113934388113934423+intron-Distal3.903793.01445K562EXOSC5
chr1114022948114023036+intron-Distal4.217854.49973K562MATR3
chr1113960754113960818+intron-Distal4.107808.18586HepG2SUGP2
chr1113960917113961024+intron-Distal3.454524.53157HepG2MATR3
chr1114009311114009340+intron-Distal3.683844.91037K562EXOSC5
chr1114022994114023102+intron-Distal5.7059413.32772HepG2MATR3
chr1114015286114015358+intron-Distal3.958363.22972K562TARDBP
chr1114013060114013146+intron-Distal3.124223.54232HepG2HNRNPL
chr1114007562114007637+intron-Distal4.589484.31720HepG2MATR3
chr1113959126113959183+intron-Distal4.087283.55640HepG2QKI
chr1114013299114013367+intron-Distal3.317733.02891HepG2HNRNPL
chr1113960362113960411+intron-Distal3.459254.36087HepG2MATR3
chr1114019351114019414+intron-Distal4.542185.58061HepG2SUGP2
chr1114019694114019766+intron-Distal4.784656.73640K562EXOSC5
chr1114008894114008905+intron-Distal4.064763.30687K562EXOSC5
chr1113958092113958208+intron-Distal3.040864.00631HepG2PTBP1
chr1114021444114021538+intron-Distal3.082265.00956HepG2SUGP2
chr1114009156114009223+intron-Distal3.258803.23296HepG2SUGP2
chr1113956561113956613+intron-Distal4.249733.59909K562EXOSC5
chr1113934857113934910+intron-Distal3.334713.59301K562HNRNPM
chr1113980556113980640+intron-Distal5.213097.72823K562PTBP1
chr1114021538114021607+intron-Distal3.921125.79523HepG2SUGP2
chr1114023411114023456+intron-Distal4.242794.78128HepG2SUGP2
chr1113962673113962772+intron-Distal3.068084.63410HepG2SUGP2
chr1113960758113960803+intron-Distal4.309764.32882HepG2MATR3
chr1114008787114008815+intron-Distal3.752595.50914K562EXOSC5
chr1114010082114010123+intron-Distal4.575775.12361K562EXOSC5
chr1113961064113961126+intron-Distal3.242795.36060HepG2SUGP2
chr1113980855113980907+intron-Distal3.539494.19039HepG2PTBP1
chr1114218621114218728+intron-Distal3.345983.00914HepG2PTBP1
chr1114010167114010214+intron-Distal4.323158.21369K562EXOSC5
chr1114007793114007827+intron-Distal5.269508.36716K562EXOSC5
chr1114022998114023143+intron-Distal4.790424.02846K562HNRNPM
chr1113934546113934629+intron-Distal5.7645211.86869HepG2HNRNPM
chr1114008527114008567+intron-Distal3.213443.39827HepG2MATR3
chr1113980740113980787+intron-Distal4.976606.42900HepG2PTBP1
chr1114019341114019405+intron-Distal3.868963.24322HepG2MATR3
chr1113988112113988182+intron-Distal3.881986.13983HepG2HLTF
chr1114021802114021896+intron-Distal3.748938.74865HepG2SUGP2
chr1113980610113980651+intron-Distal3.244263.30286HepG2PTBP1
chr1114027338114027428+intron-Distal4.844027.20012K562ILF3
chr1113998259113998360+intron-Distal5.607174.99795K562QKI
chr1113998272113998367+intron-Distal5.8083929.80385HepG2QKI
chr1114022922114022998+intron-Distal4.470364.52011K562HNRNPM
chr1113960332113960416+intron-Distal5.185059.84699HepG2SUGP2
chr1113961024113961134+intron-Distal3.587333.33633HepG2MATR3
chr1114022701114022788+intron-Distal4.732184.31720HepG2MATR3
chr1113969216113969280+intron-Distal4.659295.41654K562KHSRP
chr1113934285113934324+intron-Distal4.164773.59909K562EXOSC5
chr1113998906113998983+intron-Distal4.399103.83958HepG2QKI
chr1113934111113934186+intron-Distal3.375505.57520K562EXOSC5
chr1114022924114022994+intron-Distal4.5429210.82526HepG2MATR3
chr1114007471114007498+intron-Distal4.118213.59917K562EXOSC5
chr1114020770114020821+intron-Distal4.708466.58366HepG2SUGP2
chr1114027334114027412+intron-Distal3.593335.47956HepG2ILF3
chr1114027326114027407+intron-Distal4.749156.85275HepG2HNRNPK
chr1113998406113998440+intron-Distal5.126284.51735HepG2QKI
chr1113934589113934641+intron-Distal5.042518.13679K562HNRNPM
chr1114008528114008576+intron-Distal3.931026.11008K562EXOSC5
chr1114022979114023157+intron-Distal3.858866.91468HepG2HNRNPM
chr1113934008113934060+intron-Proximal3.507024.31658K562EXOSC5
chr1113933985113934058+intron-Proximal5.7706013.63020HepG2TIAL1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MAGI3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MAGI3 is not available on ENCORE database.

  • 49 RBPs can affect the levels of MAGI3.  








The Knockdown/knockout RNA-Seq assay for MAGI3 is not available on ENCORE database.





49 RBPs can affect the gene expression of MAGI3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MAGI3ENSG00000081026.14491.45070402.234100.288901.887201.36710HepG2ACO1
MAGI3ENSG00000081026.14403.34100620.99090-0.622603.908803.29280HepG2AKAP1
MAGI3ENSG00000081026.14517.07100410.595400.332502.157201.48990HepG2DAZAP1
MAGI3ENSG00000081026.14610.28120400.900600.606102.661301.70400HepG2DDX59
MAGI3ENSG00000081026.14565.44900384.842700.555005.308804.42520HepG2DKC1
MAGI3ENSG00000081026.14264.29610333.20320-0.334201.912801.35200HepG2DNAJC2
MAGI3ENSG00000081026.14368.90350542.83920-0.557303.247402.55600HepG2EIF4A3
MAGI3ENSG00000081026.14731.07130405.005600.8520012.7004011.16600HepG2EIF4G1
MAGI3ENSG00000081026.14329.12260514.56050-0.644704.592203.71140HepG2HNRNPK
MAGI3ENSG00000081026.14380.29550610.42180-0.682702.570001.38980HepG2HSPD1
MAGI3ENSG00000081026.14325.87100551.00620-0.757805.402204.54530HepG2MATR3
MAGI3ENSG00000081026.14356.38920524.89160-0.558605.492504.68340HepG2PCBP1
MAGI3ENSG00000081026.14248.98840334.52470-0.426002.468901.76810HepG2PPIL4
MAGI3ENSG00000081026.14536.78560404.935700.406603.166702.34480HepG2PRPF4
MAGI3ENSG00000081026.14344.83110249.111100.469002.016501.32310HepG2PRPF8
MAGI3ENSG00000081026.14544.65450412.519300.400803.198802.57210HepG2PUM1
MAGI3ENSG00000081026.14675.22810412.234800.711807.442706.36410HepG2PUM2
MAGI3ENSG00000081026.14738.37190578.467000.352002.484201.88660HepG2QKI
MAGI3ENSG00000081026.14206.12360280.27370-0.443302.074101.53550HepG2RPS19
MAGI3ENSG00000081026.14225.93630334.01590-0.564004.052603.29820HepG2SAFB2
MAGI3ENSG00000081026.14437.15330556.08310-0.347202.520401.95200HepG2SF3B4
MAGI3ENSG00000081026.14977.79200597.265800.7111012.9595012.08840HepG2SRFBP1
MAGI3ENSG00000081026.14563.90100406.751200.471202.347301.43470HepG2SRSF3
MAGI3ENSG00000081026.14793.71140518.586000.613905.232604.57080HepG2SSB
MAGI3ENSG00000081026.14606.27860436.379500.474304.196803.45970HepG2SUCLG1
MAGI3ENSG00000081026.14247.22270367.69240-0.572704.521803.83640HepG2TRIM56
MAGI3ENSG00000081026.1498.49430189.82040-0.946502.474501.75620HepG2UCHL5
MAGI3ENSG00000081026.14327.99250484.63590-0.563204.470803.73910HepG2UTP3
MAGI3ENSG00000081026.14509.60370399.635100.350602.526201.87930HepG2ZC3H8
MAGI3ENSG00000081026.14178.38250302.11270-0.760105.325004.57930K562AGGF1
MAGI3ENSG00000081026.14237.29380331.95900-0.484302.637701.68450K562AKAP8
MAGI3ENSG00000081026.14180.35070314.35770-0.801605.427604.49520K562AKAP8L
MAGI3ENSG00000081026.14232.45270329.82890-0.504803.128002.15360K562ATP5C1
MAGI3ENSG00000081026.14227.28920338.29790-0.573803.963202.89030K562DKC1
MAGI3ENSG00000081026.14297.55960219.638500.437902.292401.62850K562EIF2S2
MAGI3ENSG00000081026.14111.46240171.85510-0.624602.668401.40360K562EWSR1
MAGI3ENSG00000081026.14278.40140173.885900.678903.669802.99500K562HNRNPC
MAGI3ENSG00000081026.14193.73200333.62690-0.784204.955203.78900K562KIF1C
MAGI3ENSG00000081026.14183.08320319.35100-0.802605.005903.41970K562MAK16
MAGI3ENSG00000081026.14240.17920373.74430-0.637904.281403.10820K562MBNL1
MAGI3ENSG00000081026.14144.82760261.96640-0.855003.955002.84620K562NAA15
MAGI3ENSG00000081026.14421.61410230.717800.869706.307005.04870K562PCBP3
MAGI3ENSG00000081026.14324.31110176.971900.873806.554605.33120K562POLR2G
MAGI3ENSG00000081026.14183.25050271.47180-0.567002.841602.00890K562PPIG
MAGI3ENSG00000081026.14183.11870252.90030-0.465802.247201.63930K562PTBP1
MAGI3ENSG00000081026.14112.26560311.78680-1.4736011.9972010.91310K562PUS1
MAGI3ENSG00000081026.14163.31120303.76420-0.895306.756805.85650K562RBM15
MAGI3ENSG00000081026.14154.21130242.58160-0.653603.464302.51790K562RBM22
MAGI3ENSG00000081026.14277.74950171.560200.695003.167302.29090K562RPS19
MAGI3ENSG00000081026.14129.69960213.45560-0.718803.860502.84500K562SF3B4
MAGI3ENSG00000081026.14127.99140198.99710-0.636702.501401.47080K562U2AF1
MAGI3ENSG00000081026.14339.83570255.763500.409902.559901.74340K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MAGI3 is not available on ENCORE database.





1 RBPs can affect the splicing of MAGI3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMAGI3ENSG00000081026.14chr1+1142248331142249241142238191142239581142255181142285450.747000.000000.00005includedHepG2PTBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MAGI3 is not avaliable on ENCORE database.