IZUMO4

General Information

Gene Name       : IZUMO4
Gene ID             : ENSG00000099840.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: IZUMO4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878IZUMO4ENSG00000099840.132.414.973.69ENCSR000AEF
HepG2IZUMO4ENSG00000099840.131.420.661.04ENCSR985KAT
K562IZUMO4ENSG00000099840.130.560.920.74ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for IZUMO4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • IZUMO4 RNA is bound by 4 proteins.  







eCLIP assay for IZUMO4 is not avaliable on ENCORE database.





4 proteins are bound to IZUMO4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1920966922096769+5'-UTR3.336053.23179HepG2RBFOX2
chr1920967982096864+5'-UTR3.760515.55843HepG2RBFOX2
chr1920968102096886+5'-UTR4.206174.61288HepG2PRPF4
chr1920968342096922+5'-UTR3.856103.25414K562RBFOX2
chr1920968642096947+5'-UTR,CDS4.638304.50934HepG2RBFOX2
chr1920968372096900+5'-UTR4.324214.46002K562DDX24
chr1920991922099321+CDS,intron-Proximal3.637233.02335HepG2LSM11
chr1920988522098926+intron-Distal,intron-Proximal4.154453.86417HepG2PRPF4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for IZUMO4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for IZUMO4 is not available on ENCORE database.

  • 65 RBPs can affect the levels of IZUMO4.  








The Knockdown/knockout RNA-Seq assay for IZUMO4 is not available on ENCORE database.





65 RBPs can affect the gene expression of IZUMO4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
IZUMO4ENSG00000099840.917.3179075.15100-2.117507.623206.71580HepG2ACO1
IZUMO4ENSG00000099840.996.1570034.603401.474405.174003.98010HepG2BCLAF1
IZUMO4ENSG00000099840.959.127709.603202.622207.498706.57230HepG2BOP1
IZUMO4ENSG00000099840.934.7763075.10160-1.110703.406402.68220HepG2CKAP4
IZUMO4ENSG00000099840.9104.6291061.982400.755302.736001.99740HepG2DAZAP1
IZUMO4ENSG00000099840.978.0079019.906901.970204.590703.34170HepG2DHX30
IZUMO4ENSG00000099840.9123.1283071.890600.776202.755002.07870HepG2DKC1
IZUMO4ENSG00000099840.955.0973020.638401.416503.546902.75740HepG2DNAJC21
IZUMO4ENSG00000099840.944.1932020.461201.110802.290301.68500HepG2DNAJC2
IZUMO4ENSG00000099840.9134.6946067.983000.986302.945702.33390HepG2EIF2S1
IZUMO4ENSG00000099840.922.8712048.66830-1.089502.159801.35220HepG2EIF3D
IZUMO4ENSG00000099840.9219.7162075.089601.548907.305006.26670HepG2EIF4A3
IZUMO4ENSG00000099840.927.3796073.66580-1.427903.585102.71680HepG2FIP1L1
IZUMO4ENSG00000099840.9134.3490051.782801.375305.453004.36110HepG2FUBP3
IZUMO4ENSG00000099840.9154.0909074.745301.043603.325802.34140HepG2G3BP2
IZUMO4ENSG00000099840.986.4900023.178101.899704.246403.40080HepG2HNRNPC
IZUMO4ENSG00000099840.956.7577021.955701.370103.558602.75340HepG2HNRNPF
IZUMO4ENSG00000099840.990.267109.536003.2426013.2299011.99130HepG2HNRNPLL
IZUMO4ENSG00000099840.949.4693023.024701.103302.257501.70440HepG2HNRNPU
IZUMO4ENSG00000099840.946.8065021.620101.114202.241701.58600HepG2IGF2BP1
IZUMO4ENSG00000099840.991.1215049.406800.883002.280001.53230HepG2LARP4
IZUMO4ENSG00000099840.950.463009.727802.374904.755903.46570HepG2MTPAP
IZUMO4ENSG00000099840.972.197008.456303.0937010.203008.84030HepG2NSUN2
IZUMO4ENSG00000099840.9212.3820032.476402.709104.994503.77240HepG2PABPC1
IZUMO4ENSG00000099840.945.3737083.31630-0.876702.093701.55380HepG2PCBP1
IZUMO4ENSG00000099840.963.9810020.535901.639405.112504.13940HepG2PPIL4
IZUMO4ENSG00000099840.994.6433026.271301.848908.551807.29660HepG2PRPF4
IZUMO4ENSG00000099840.930.5686084.79400-1.471903.744903.12980HepG2PTBP1
IZUMO4ENSG00000099840.9103.2475058.676000.815202.621702.03900HepG2PUF60
IZUMO4ENSG00000099840.912.2188038.03560-1.638202.333301.68200HepG2RAVER1
IZUMO4ENSG00000099840.927.4975058.65920-1.093102.353901.86610HepG2RBM22
IZUMO4ENSG00000099840.973.9547037.356500.985202.355101.48190HepG2RPS10
IZUMO4ENSG00000099840.974.3172020.503501.857706.755905.81460HepG2SAFB2
IZUMO4ENSG00000099840.934.1927086.59630-1.340604.155303.31950HepG2SF3A3
IZUMO4ENSG00000099840.944.732509.438202.244604.689803.79130HepG2SF3B1
IZUMO4ENSG00000099840.939.0674088.25180-1.175702.424601.86600HepG2SF3B4
IZUMO4ENSG00000099840.9127.9461056.272401.184906.063905.08860HepG2SLBP
IZUMO4ENSG00000099840.924.9587092.12790-1.884105.411204.80550HepG2SRSF1
IZUMO4ENSG00000099840.919.0985057.94060-1.601103.961103.23560HepG2SRSF5
IZUMO4ENSG00000099840.951.7419021.570801.262202.932202.21900HepG2SRSF7
IZUMO4ENSG00000099840.933.6723074.96140-1.154602.889902.32870HepG2SRSF9
IZUMO4ENSG00000099840.9135.0283057.529101.230806.493305.76900HepG2SSB
IZUMO4ENSG00000099840.9138.6247038.970601.830608.158507.09700HepG2SUPV3L1
IZUMO4ENSG00000099840.994.9551022.366502.085808.658607.86320HepG2TIAL1
IZUMO4ENSG00000099840.915.1346062.99520-2.057405.558704.68400HepG2U2AF1
IZUMO4ENSG00000099840.9123.8898035.704001.794807.227105.55550HepG2UPF2
IZUMO4ENSG00000099840.930.9329074.14510-1.261203.602502.93410HepG2UTP3
IZUMO4ENSG00000099840.964.4001031.999801.008902.441301.42070HepG2XPO5
IZUMO4ENSG00000099840.9148.0658038.362101.948407.546006.36080HepG2XRN2
IZUMO4ENSG00000099840.956.4305025.918401.122402.708602.04320HepG2ZC3H8
IZUMO4ENSG00000099840.951.8865084.46270-0.703001.943401.46310HepG2ZNF622
IZUMO4ENSG00000099840.9235.2204076.116201.627608.846207.60460K562AKAP8L
IZUMO4ENSG00000099840.982.8276041.846700.984902.831401.86000K562BCLAF1
IZUMO4ENSG00000099840.937.9745078.31560-1.044302.987302.31220K562DDX47
IZUMO4ENSG00000099840.982.9365033.325101.315304.280103.41380K562EIF2S2
IZUMO4ENSG00000099840.933.6139074.69330-1.151903.295902.40430K562EIF4A3
IZUMO4ENSG00000099840.912.7446077.67840-2.6076010.183309.10630K562FXR1
IZUMO4ENSG00000099840.9140.4606080.775300.798103.087602.21210K562KIF1C
IZUMO4ENSG00000099840.980.0533033.256901.267203.497701.82490K562NUSAP1
IZUMO4ENSG00000099840.946.03860102.52700-1.155103.123401.59940K562PNPT1
IZUMO4ENSG00000099840.910.6274033.36390-1.650502.367501.67170K562PRPF8
IZUMO4ENSG00000099840.915.2921046.82380-1.614503.872603.09940K562PTBP1
IZUMO4ENSG00000099840.935.94770108.86180-1.598506.626805.36390K562PUF60
IZUMO4ENSG00000099840.9141.5170073.549200.944104.158503.44820K562RBM15
IZUMO4ENSG00000099840.921.0783045.90330-1.122802.031101.41490K562SRSF1
IZUMO4ENSG00000099840.913.3224041.95650-1.655003.389202.48170K562SYNCRIP
IZUMO4ENSG00000099840.969.0774030.951301.158102.647501.72650K562TRIM56
IZUMO4ENSG00000099840.9140.9347076.535300.880702.533501.31800K562UTP18
IZUMO4ENSG00000099840.9107.0964055.508300.948002.244001.45720K562WDR3
IZUMO4ENSG00000099840.919.4239057.56730-1.567403.751401.83540K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for IZUMO4 is not available on ENCORE database.





4 RBPs can affect the splicing of IZUMO4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEIZUMO4ENSG00000099840.9chr19+209758320978112097422209749420979272097954-0.726000.000120.03950excludedHepG2EFTUD2
SEIZUMO4ENSG00000099840.9chr19+209758320978112097422209749420979272097954-0.406000.000170.02758excludedHepG2SSB
RIIZUMO4ENSG00000099840.9chr19+209792720983332097927209812620982852098333-0.502000.000430.09592excludedK562PUM2
RIIZUMO4ENSG00000099840.9chr19+2097927209812620979272097954209805020981260.151000.002030.03245includedK562FXR1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for IZUMO4 is not avaliable on ENCORE database.