HOXB7

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	HOXB7	ENSG00000260027.4	0.84	2.55	1.69	ENCSR000AEF
HepG2	HOXB7	ENSG00000260027.4	0.00	0.04	0.02	ENCSR985KAT
K562	HOXB7	ENSG00000260027.4	7.44	7.82	7.63	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for HOXB7 is not avaliable on ENCORE database.

Proteins bound to RNA

HOXB7 RNA is bound by 37 proteins.

eCLIP assay for HOXB7 is not avaliable on ENCORE database.

37 proteins are bound to HOXB7 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	46684907	46684968	-	3'-UTR,intron-Distal,intron-Proximal	4.26654	4.96821	K562	PUM2
chr17	46699142	46699231	-	3'-UTR,intron-Distal	3.83196	43.98039	K562	UPF1
chr17	46698557	46698607	-	3'-UTR,intron-Distal	4.73116	30.21226	K562	UPF1
chr17	46703416	46703470	-	CDS,intron-Distal	3.68273	4.73981	K562	METAP2
chr17	46689961	46690063	-	3'-UTR,intron-Distal	5.47551	5.18845	K562	PCBP1
chr17	46700211	46700259	-	3'-UTR,intron-Distal	3.56288	6.20453	K562	TIA1
chr17	46702914	46703024	-	intron-Distal	4.98470	25.84807	K562	CSTF2T
chr17	46701031	46701086	-	intron-Distal	3.79788	3.84914	K562	SLTM
chr17	46703646	46703750	-	5'-UTR,intron-Distal	3.92282	17.75696	K562	PCBP1
chr17	46697302	46697347	-	intron-Distal	3.94119	8.39538	K562	SLTM
chr17	46695503	46695576	-	intron-Distal	3.79620	3.94652	K562	FUS
chr17	46702054	46702099	-	intron-Distal	3.54329	10.30353	K562	CSTF2T
chr17	46695305	46695361	-	intron-Distal	3.54959	6.61592	K562	SLTM
chr17	46700471	46700497	-	CDS,intron-Distal	4.71753	7.10067	K562	YBX3
chr17	46700212	46700278	-	3'-UTR,CDS,intron-Distal	4.17494	11.36558	K562	DDX6
chr17	46703703	46703746	-	5'-UTR,intron-Distal	3.69043	6.13299	K562	GTF2F1
chr17	46698737	46698781	-	3'-UTR,intron-Distal	3.67540	27.53121	K562	UPF1
chr17	46702898	46703016	-	intron-Distal	3.04961	6.97151	K562	SAFB2
chr17	46703400	46703458	-	CDS,intron-Distal	3.96248	6.15678	K562	GEMIN5
chr17	46691938	46692057	-	CDS,intron-Distal,intron-Proximal	3.58734	9.95074	K562	CSTF2T
chr17	46702524	46702610	-	intron-Distal	4.19261	16.87930	K562	NONO
chr17	46699457	46699518	-	3'-UTR,intron-Distal	3.12050	5.24486	K562	IGF2BP1
chr17	46698664	46698707	-	3'-UTR,intron-Distal	3.54702	12.23982	K562	DDX6
chr17	46695628	46695706	-	intron-Distal	4.69358	9.59244	K562	SLTM
chr17	46698458	46698480	-	intron-Distal,intron-Proximal	3.99742	6.47842	K562	SLTM
chr17	46700208	46700255	-	3'-UTR,intron-Distal	3.26746	9.93776	K562	PABPC4
chr17	46695500	46695567	-	intron-Distal	3.73041	9.84633	K562	SLTM
chr17	46698125	46698176	-	intron-Distal	3.27022	3.67498	K562	SAFB2
chr17	46693421	46693471	-	intron-Distal	3.03373	5.85432	K562	CSTF2T
chr17	46695390	46695478	-	intron-Distal	3.37277	5.37119	K562	CSTF2T
chr17	46700683	46700719	-	intron-Distal	3.86921	3.28464	K562	EWSR1
chr17	46698553	46698613	-	3'-UTR,intron-Distal	3.72666	9.30162	K562	ZC3H11A
chr17	46692545	46692589	-	intron-Distal,intron-Proximal	4.28638	7.22321	K562	PTBP1
chr17	46699563	46699610	-	3'-UTR,intron-Distal	4.17800	6.31152	K562	IGF2BP2
chr17	46702581	46702621	-	intron-Distal	3.43288	7.89276	K562	CSTF2T
chr17	46703970	46704013	-	intron-Distal	4.84093	7.10563	K562	NONO
chr17	46699283	46699393	-	3'-UTR,intron-Distal	3.56066	27.39953	K562	IGF2BP1
chr17	46698527	46698576	-	3'-UTR,intron-Distal	5.68803	42.07808	K562	CPEB4
chr17	46692282	46692364	-	5'-UTR,intron-Distal,intron-Proximal	5.16823	8.40257	K562	GTF2F1
chr17	46700051	46700137	-	3'-UTR,intron-Distal	4.99642	37.35813	K562	PCBP1
chr17	46692322	46692361	-	intron-Distal,intron-Proximal	4.42828	7.59321	K562	PTBP1
chr17	46703649	46703751	-	5'-UTR,intron-Distal	3.91766	13.32012	K562	DDX6
chr17	46692286	46692322	-	5'-UTR,intron-Distal,intron-Proximal	4.92828	6.19339	K562	PTBP1
chr17	46694377	46694407	-	intron-Distal	3.71739	3.21228	K562	TIA1
chr17	46689861	46689917	-	3'-UTR,intron-Distal	3.02683	3.20331	K562	CSTF2T
chr17	46702808	46702878	-	intron-Distal	3.23079	5.10348	K562	EWSR1
chr17	46702919	46702973	-	intron-Distal	3.42129	4.19384	K562	TAF15
chr17	46691442	46691504	-	intron-Distal	4.56833	7.56720	K562	PTBP1
chr17	46698556	46698613	-	3'-UTR,intron-Distal	4.06345	12.81104	K562	GTF2F1
chr17	46698540	46698607	-	3'-UTR,intron-Distal	4.92953	14.37123	K562	APOBEC3C
chr17	46699315	46699338	-	3'-UTR,intron-Distal	3.18819	12.52825	K562	IGF2BP2
chr17	46702051	46702097	-	intron-Distal	3.12724	3.39478	K562	TAF15
chr17	46692301	46692360	-	intron-Distal,intron-Proximal	3.89602	3.08243	K562	ILF3
chr17	46698210	46698245	-	intron-Distal	4.27831	3.86644	K562	YWHAG
chr17	46698639	46698681	-	3'-UTR,intron-Distal	3.64061	8.44273	K562	PABPC4
chr17	46698554	46698587	-	3'-UTR,intron-Distal	3.26569	26.89812	K562	TIA1
chr17	46698637	46698716	-	3'-UTR,intron-Distal	4.44758	40.76075	K562	UPF1
chr17	46699006	46699049	-	3'-UTR,intron-Distal	3.32537	3.54074	K562	RBM15
chr17	46698890	46698934	-	3'-UTR,intron-Distal	3.39990	4.77298	K562	AKAP1
chr17	46698453	46698510	-	intron-Distal,intron-Proximal	3.27801	3.87218	K562	SAFB2
chr17	46702336	46702381	-	intron-Distal	3.78981	8.35508	K562	NONO
chr17	46703113	46703155	-	CDS,intron-Distal	3.84990	7.40140	K562	YBX3
chr17	46702534	46702567	-	intron-Distal	3.69049	7.62523	K562	TIA1
chr17	46691163	46691204	-	intron-Distal	5.45359	8.42544	K562	PTBP1
chr17	46698556	46698611	-	3'-UTR,intron-Distal	4.47348	41.05276	K562	PABPC4
chr17	46702917	46702953	-	intron-Distal	3.52534	4.44955	K562	LSM11
chr17	46702892	46703015	-	intron-Distal	4.30670	14.50888	K562	SLTM
chr17	46702419	46702450	-	intron-Distal	3.42842	4.59961	K562	NONO
chr17	46699275	46699334	-	3'-UTR,intron-Distal	3.00778	6.79218	K562	PCBP1
chr17	46698881	46698926	-	3'-UTR,intron-Distal	3.53015	3.51298	K562	AKAP8L
chr17	46695383	46695496	-	intron-Distal	5.32796	16.79509	K562	SLTM
chr17	46694070	46694125	-	intron-Distal	4.90796	8.16302	K562	CSTF2T
chr17	46699060	46699142	-	3'-UTR,intron-Distal	3.74133	45.50724	K562	UPF1
chr17	46698781	46698832	-	3'-UTR,intron-Distal	3.62287	24.37694	K562	UPF1
chr17	46696813	46696865	-	intron-Distal	5.32796	15.98646	K562	SLTM
chr17	46700476	46700522	-	CDS,intron-Distal	4.74336	4.65563	K562	AQR
chr17	46695513	46695575	-	intron-Distal	5.16525	9.54146	K562	CSTF2T
chr17	46698962	46699001	-	3'-UTR,intron-Distal	4.30073	16.51329	K562	UPF1
chr17	46699014	46699060	-	3'-UTR,intron-Distal	3.48480	15.11366	K562	UPF1
chr17	46701029	46701104	-	intron-Distal	3.83670	7.09842	K562	NONO
chr17	46699160	46699192	-	3'-UTR,intron-Distal	3.10541	3.13141	K562	RBM15
chr17	46698897	46698957	-	3'-UTR,intron-Distal	3.31136	7.00390	K562	RBM15
chr17	46695320	46695349	-	intron-Distal	3.90960	3.70058	K562	CSTF2T
chr17	46697841	46697892	-	intron-Distal	4.38950	4.39341	K562	YWHAG
chr17	46697622	46697650	-	intron-Distal	5.09562	7.82062	K562	SLTM
chr17	46698547	46698613	-	3'-UTR,intron-Distal	3.92298	35.47044	K562	DDX6
chr17	46698176	46698269	-	intron-Distal	3.63049	10.45917	K562	SAFB2
chr17	46698185	46698265	-	intron-Distal	4.54825	17.69791	K562	SLTM
chr17	46702806	46702846	-	intron-Distal	3.66377	5.35122	K562	NONO
chr17	46692299	46692369	-	5'-UTR,intron-Distal,intron-Proximal	3.24500	4.09267	K562	FAM120A
chr17	46691316	46691352	-	intron-Distal	4.38705	5.63677	K562	PTBP1
chr17	46696545	46696574	-	intron-Distal	3.46042	5.42289	K562	SLTM
chr17	46698676	46698719	-	3'-UTR,intron-Distal	3.50517	6.57620	K562	ZC3H11A
chr17	46698898	46698936	-	3'-UTR,intron-Distal	3.04736	6.56095	K562	IGF2BP2
chr17	46696818	46696869	-	intron-Distal	4.35336	4.91139	K562	YWHAG
chr17	46692293	46692359	-	5'-UTR,intron-Distal,intron-Proximal	4.00987	14.63176	K562	TIA1
chr17	46698809	46698851	-	3'-UTR,intron-Distal	3.50778	4.14151	K562	PCBP1
chr17	46696874	46696925	-	intron-Distal	3.80352	3.34442	K562	FUS
chr17	46699173	46699229	-	3'-UTR,intron-Distal	3.72922	6.44222	K562	APOBEC3C
chr17	46698681	46698718	-	3'-UTR,intron-Distal	3.26192	6.74069	K562	PABPC4
chr17	46698204	46698266	-	intron-Distal	3.26987	9.36349	K562	CSTF2T
chr17	46699153	46699253	-	3'-UTR,intron-Distal	3.16168	28.60474	K562	PUM2
chr17	46709855	46709895	-	intron-Distal	5.07532	6.56353	K562	DGCR8
chr17	46702333	46702391	-	intron-Distal	3.91783	3.94652	K562	FUS
chr17	46703706	46703747	-	5'-UTR,intron-Distal	3.10396	6.61633	K562	NONO
chr17	46698322	46698371	-	intron-Distal	4.04084	9.92150	K562	SLTM
chr17	46697821	46697906	-	intron-Distal	3.53733	5.60906	K562	FUS
chr17	46703698	46703749	-	5'-UTR,intron-Distal	3.23151	7.28897	K562	METAP2
chr17	46698730	46698773	-	3'-UTR,intron-Distal	3.35209	8.65582	K562	FAM120A
chr17	46699220	46699280	-	3'-UTR,intron-Distal	3.12800	13.85331	K562	IGF2BP1
chr17	46703649	46703698	-	5'-UTR,intron-Distal	3.58672	8.34487	K562	METAP2
chr17	46698638	46698711	-	3'-UTR,intron-Distal	3.21543	3.95503	K562	APOBEC3C
chr17	46702915	46702956	-	intron-Distal	3.75319	3.85148	K562	GTF2F1
chr17	46696738	46696813	-	intron-Distal	4.74867	23.49194	K562	SLTM
chr17	46698190	46698256	-	intron-Distal	4.34407	6.12418	K562	FUS
chr17	46692914	46692971	-	intron-Distal	3.77262	9.67373	K562	CSTF2T
chr17	46699075	46699118	-	3'-UTR,intron-Distal	3.21588	3.41981	K562	HNRNPK
chr17	46702891	46702981	-	intron-Distal	3.68396	10.17572	K562	NONO
chr17	46700214	46700236	-	3'-UTR,intron-Distal	3.45969	9.82186	K562	UPF1
chr17	46698561	46698612	-	3'-UTR,intron-Distal	3.47759	6.23800	K562	XRN2
chr17	46699097	46699133	-	3'-UTR,intron-Distal	3.40234	4.80505	K562	PCBP1
chr17	46703908	46703948	-	intron-Distal,intron-Proximal	3.43345	3.77567	K562	NONO
chr17	46697835	46697893	-	intron-Distal	3.84970	10.76253	K562	SLTM
chr17	46702552	46702611	-	intron-Distal	4.88876	5.55667	K562	EWSR1
chr17	46692272	46692362	-	5'-UTR,intron-Distal,intron-Proximal	4.37545	21.00892	K562	CSTF2T
chr17	46703693	46703751	-	5'-UTR,intron-Distal	3.48066	18.19195	K562	CSTF2T
chr17	46689824	46689928	-	3'-UTR,intron-Distal	3.29759	3.90146	K562	KHSRP
chr17	46699844	46699898	-	3'-UTR,intron-Distal	3.37745	9.87144	K562	IGF2BP2
chr17	46707004	46707111	-	intron-Distal	3.24167	6.52166	K562	PTBP1
chr17	46699271	46699314	-	3'-UTR,intron-Distal	3.11864	16.32565	K562	IGF2BP2
chr17	46692546	46692594	-	intron-Distal,intron-Proximal	4.05643	3.21228	K562	TIA1
chr17	46697180	46697235	-	intron-Distal	3.33886	7.17019	K562	SLTM
chr17	46696881	46696925	-	intron-Distal	3.56206	6.97590	K562	SLTM
chr17	46701762	46701822	-	intron-Distal	3.18068	3.41981	K562	HNRNPK
chr17	46703553	46703742	-	5'-UTR,CDS,intron-Distal	3.04127	21.08672	K562	DDX3X
chr17	46695264	46695356	-	intron-Distal	4.13594	8.88420	K562	NONO
chr17	46690161	46690268	-	3'-UTR,intron-Distal	4.63961	6.09301	K562	CSTF2T
chr17	46699216	46699271	-	3'-UTR,intron-Distal	3.70580	14.98122	K562	IGF2BP2
chr17	46696553	46696595	-	intron-Distal	3.54092	4.48704	K562	AGGF1
chr17	46698576	46698607	-	3'-UTR,intron-Distal	3.47889	6.77254	K562	CPEB4
chr17	46702327	46702371	-	intron-Distal	3.85133	5.06168	K562	SLTM
chr17	46698464	46698499	-	intron-Distal,intron-Proximal	3.81514	6.86777	K562	CSTF2T
chr17	46703110	46703151	-	CDS,intron-Distal	4.55955	11.09331	K562	RBM15
chr17	46698884	46698962	-	3'-UTR,intron-Distal	3.88529	35.68662	K562	UPF1
chr17	46697301	46697366	-	intron-Distal	4.64298	6.20697	K562	YWHAG
chr17	46698562	46698610	-	3'-UTR,intron-Distal	3.23212	20.06844	K562	CSTF2T
chr17	46697025	46697089	-	intron-Distal	4.70554	5.37891	K562	SAFB2
chr17	46699169	46699223	-	3'-UTR,intron-Distal	3.17672	11.51129	K562	PCBP1
chr17	46702661	46702710	-	intron-Distal	3.54398	5.06168	K562	SLTM
chr17	46699813	46699844	-	3'-UTR,intron-Distal,intron-Proximal	3.72833	10.21298	K562	IGF2BP2
chr17	46702934	46702952	-	intron-Distal	3.67690	3.23793	K562	GEMIN5
chr17	46691580	46691626	-	intron-Distal	3.90338	3.71735	K562	TIA1
chr17	46698990	46699038	-	3'-UTR,intron-Distal	4.15172	7.43791	K562	IGF2BP2
chr17	46695634	46695710	-	intron-Distal	4.20588	9.51280	K562	CSTF2T
chr17	46692170	46692229	-	5'-UTR,intron-Distal	4.20589	22.74372	K562	PTBP1
chr17	46699148	46699216	-	3'-UTR,intron-Distal	4.32306	21.00845	K562	IGF2BP2
chr17	46703056	46703114	-	intron-Distal	3.90111	6.80869	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for HOXB7 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for HOXB7 is not available on ENCORE database.
27 RBPs can affect the levels of HOXB7.

The Knockdown/knockout RNA-Seq assay for HOXB7 is not available on ENCORE database.

27 RBPs can affect the gene expression of HOXB7 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
HOXB7	ENSG00000260027.3	27.51120	0.00000	99999.99990	3.20080	2.63370	HepG2	AKAP1
HOXB7	ENSG00000260027.3	21.46830	0.54410	5.30220	5.75560	4.85920	HepG2	CKAP4
HOXB7	ENSG00000260027.3	12.31360	1.15940	3.40870	2.11120	1.44870	HepG2	CNOT7
HOXB7	ENSG00000260027.3	431.77250	248.48070	0.79700	5.78350	4.98900	K562	AQR
HOXB7	ENSG00000260027.3	348.61850	252.04600	0.46790	2.63050	1.49270	K562	CCDC124
HOXB7	ENSG00000260027.3	140.15760	85.30100	0.71630	2.37230	1.52850	K562	EFTUD2
HOXB7	ENSG00000260027.3	274.11630	190.18840	0.52730	2.89680	2.16410	K562	EIF2S2
HOXB7	ENSG00000260027.3	74.08370	146.73840	-0.98600	4.00650	2.61800	K562	FKBP4
HOXB7	ENSG00000260027.3	388.00810	204.35620	0.92490	7.24200	5.82330	K562	FMR1
HOXB7	ENSG00000260027.3	363.98580	173.21980	1.07120	5.59580	4.24510	K562	FTO
HOXB7	ENSG00000260027.3	272.45440	191.72900	0.50680	2.24670	1.53040	K562	GPKOW
HOXB7	ENSG00000260027.3	391.80390	253.43870	0.62840	3.83480	2.94990	K562	GRSF1
HOXB7	ENSG00000260027.3	231.73310	155.15720	0.57860	2.29880	1.45390	K562	HNRNPM
HOXB7	ENSG00000260027.3	391.26160	255.79770	0.61300	3.58960	2.68760	K562	HSPD1
HOXB7	ENSG00000260027.3	247.91900	163.73640	0.59840	2.21800	1.39290	K562	KRR1
HOXB7	ENSG00000260027.3	330.85440	187.15270	0.82190	5.80010	4.50330	K562	METAP2
HOXB7	ENSG00000260027.3	508.14660	308.28240	0.72090	5.88230	4.24350	K562	MSI2
HOXB7	ENSG00000260027.3	401.57460	297.18260	0.43420	2.73310	1.30360	K562	PNPT1
HOXB7	ENSG00000260027.3	148.33920	83.00820	0.83750	2.81750	2.06140	K562	PRPF8
HOXB7	ENSG00000260027.3	527.21560	315.56310	0.74040	5.75250	4.58090	K562	PUF60
HOXB7	ENSG00000260027.3	425.70290	328.87180	0.37220	2.14980	1.30160	K562	PUM2
HOXB7	ENSG00000260027.3	335.28760	217.64520	0.62330	3.44400	2.84760	K562	PUS1
HOXB7	ENSG00000260027.3	292.34620	212.05840	0.46310	2.34540	1.79210	K562	RBM15
HOXB7	ENSG00000260027.3	81.12200	138.26090	-0.76920	2.64550	1.67730	K562	RCC2
HOXB7	ENSG00000260027.3	79.43290	188.10310	-1.24370	8.36500	7.00690	K562	SF3A3
HOXB7	ENSG00000260027.3	316.25420	182.37410	0.79410	2.85540	1.86570	K562	SF3B1
HOXB7	ENSG00000260027.3	167.74140	85.04610	0.97980	4.26540	2.97430	K562	UCHL5
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

HOXB7

General Information

Functions

Localization

Domains (AlphaFold: HOXB7)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for HOXB7 is not avaliable on ENCORE database.

37 proteins are bound to HOXB7 RNA:

eCLIP assay for HOXB7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for HOXB7 is not available on ENCORE database.

27 RBPs can affect the gene expression of HOXB7 :

The Knockdown/knockout RNA-Seq assay for HOXB7 is not available on ENCORE database.

No RBPs affect the alternative splcing events of HOXB7 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for HOXB7 is not avaliable on ENCORE database.