HNRNPH2

General Information

Gene Name       : HNRNPH2
Gene ID             : ENSG00000126945.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HNRNPH2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HNRNPH2ENSG00000126945.856.9249.8753.39ENCSR000AEF
HepG2HNRNPH2ENSG00000126945.842.1859.4050.79ENCSR985KAT
K562HNRNPH2ENSG00000126945.849.2346.7347.98ENCSR000AEO

Assays

1 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
RNA Bind-n-SeqRBNS: HNRNPH2ENCSR328PGZHNRNPH2cell-free sampleReleased






  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
HNRNPH2293TshRNAHNRNPH2-BG293LV05-41,HNRNPH2-BG293LV05-42NT-BG293LV05-1,NT-BG293LV05-2,SubmittingENCORE2
HNRNPH2293TshRNABG293LV05-43,BG293LV05-44BG293LV05-1,BG293LV05-2NotSatisfiedENCORE2
HNRNPH2293TshRNAHNRNPH2-BG293LV06-71B,HNRNPH2-BG293LV06-72BNT-BG293LV06-1B,NT-BG293LV06-2B,SequencedENCORE2


  RNA Bind-n-Seqn  
  GeneName    gene_aliases    Status    Project    Note  
HNRNPH2HNRNPH2ReleasedENCODE3


  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HNRNPH2 is not avaliable on ENCORE database.


  • The binding motifs of HNRNPH2

    • Trulli

Proteins bound to RNA
  • HNRNPH2 RNA is bound by 7 proteins.  







eCLIP assay for HNRNPH2 is not avaliable on ENCORE database.





7 proteins are bound to HNRNPH2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX100669023100669097+3'-UTR3.021833.14463HepG2FUBP3
chrX100668424100668432+3'-UTR3.737105.01178K562PUM2
chrX100668345100668387+3'-UTR4.5105923.26288K562PUM2
chrX100668560100668640+3'-UTR5.1404010.11393K562LIN28B
chrX100668387100668417+3'-UTR4.4581420.88544K562PUM2
chrX100663214100663304+5'-UTR,intron-Distal3.048248.02816K562DDX3X
chrX100667537100667586+CDS3.723953.30425K562LIN28B
chrX100667149100667314+3'-UTR,CDS3.033387.44851K562UCHL5
chrX100667521100667700+CDS3.626905.49938HepG2G3BP1
chrX100667015100667054+3'-UTR,CDS5.119355.81375HepG2XPO5
chrX100667726100667777+CDS4.116453.66349K562LIN28B
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HNRNPH2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HNRNPH2 is not available on ENCORE database.

  • 79 RBPs can affect the levels of HNRNPH2.  








The Knockdown/knockout RNA-Seq assay for HNRNPH2 is not available on ENCORE database.





79 RBPs can affect the gene expression of HNRNPH2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HNRNPH2ENSG00000126945.82573.986001988.460900.372302.524502.01430HepG2AKAP1
HNRNPH2ENSG00000126945.8720.562501481.99690-1.0403013.2828011.14840HepG2BCCIP
HNRNPH2ENSG00000126945.81295.618901995.01000-0.622808.233107.26680HepG2BOP1
HNRNPH2ENSG00000126945.81405.415301831.53430-0.382103.194602.46110HepG2CPSF6
HNRNPH2ENSG00000126945.81603.830902107.12280-0.393807.965806.80410HepG2DAZAP1
HNRNPH2ENSG00000126945.8908.954101457.10850-0.680806.276905.16860HepG2DDX55
HNRNPH2ENSG00000126945.81101.226401636.17660-0.571204.846004.04920HepG2DDX6
HNRNPH2ENSG00000126945.8999.484101317.01040-0.398004.823003.91740HepG2DNAJC21
HNRNPH2ENSG00000126945.81047.047901305.38260-0.318104.424403.63430HepG2DNAJC2
HNRNPH2ENSG00000126945.8902.928901573.02410-0.800909.804508.72970HepG2EIF2S1
HNRNPH2ENSG00000126945.8752.695201024.90420-0.445403.087902.13750HepG2EIF3D
HNRNPH2ENSG00000126945.81339.102201738.43840-0.376502.395201.79940HepG2EIF4A3
HNRNPH2ENSG00000126945.81707.284002078.89740-0.284103.492002.56800HepG2EIF4G1
HNRNPH2ENSG00000126945.8723.99840912.54710-0.333902.200101.40750HepG2GEMIN5
HNRNPH2ENSG00000126945.81089.400201333.03840-0.291203.214802.16370HepG2HDGF
HNRNPH2ENSG00000126945.8912.710901329.62780-0.542806.035105.13190HepG2HNRNPA1
HNRNPH2ENSG00000126945.81416.954301936.55740-0.450707.308305.91520HepG2HNRNPA2B1
HNRNPH2ENSG00000126945.81080.690901478.96570-0.452604.388603.53020HepG2HNRNPC
HNRNPH2ENSG00000126945.81288.437701741.88210-0.435006.574705.53300HepG2HNRNPF
HNRNPH2ENSG00000126945.81223.762301919.39540-0.6493018.5911016.99030HepG2HNRNPL
HNRNPH2ENSG00000126945.81391.782901981.35860-0.509605.018204.19660HepG2HNRNPLL
HNRNPH2ENSG00000126945.81276.760301469.18760-0.202501.849701.34510HepG2HNRNPU
HNRNPH2ENSG00000126945.81259.572801715.27130-0.445505.019604.07190HepG2IGF2BP1
HNRNPH2ENSG00000126945.81163.466501653.87310-0.507404.598403.74780HepG2IGF2BP2
HNRNPH2ENSG00000126945.8884.852801500.72640-0.7622022.9665021.10050HepG2ILF2
HNRNPH2ENSG00000126945.8855.729901369.23950-0.678108.402606.37950HepG2LIN28B
HNRNPH2ENSG00000126945.81127.507601754.43580-0.637906.677505.67150HepG2MAGOH
HNRNPH2ENSG00000126945.81396.045601764.28560-0.337702.065901.51520HepG2MATR3
HNRNPH2ENSG00000126945.81038.071201310.39780-0.336103.591102.76180HepG2PPIL4
HNRNPH2ENSG00000126945.81681.151201994.56770-0.246601.814501.31860HepG2PUF60
HNRNPH2ENSG00000126945.81652.270902117.35600-0.357806.863706.01540HepG2PUM1
HNRNPH2ENSG00000126945.8549.371101350.53730-1.2977011.8479010.46490HepG2RAVER1
HNRNPH2ENSG00000126945.8958.388001276.93570-0.414002.448101.45260HepG2RCC2
HNRNPH2ENSG00000126945.81225.054601876.21430-0.615007.905806.84310HepG2RPLP0
HNRNPH2ENSG00000126945.81547.151601912.55000-0.305904.630503.75880HepG2SLBP
HNRNPH2ENSG00000126945.82299.569401796.717800.355905.852605.22870HepG2SRSF1
HNRNPH2ENSG00000126945.81706.809701969.38620-0.206402.052401.50320HepG2SRSF5
HNRNPH2ENSG00000126945.81368.281601711.29090-0.322703.808303.01130HepG2SRSF7
HNRNPH2ENSG00000126945.81942.841402239.69950-0.205102.495401.89890HepG2SUCLG1
HNRNPH2ENSG00000126945.81328.657201615.01700-0.281602.919902.34550HepG2TAF15
HNRNPH2ENSG00000126945.81578.798501931.16440-0.290602.119601.47320HepG2TARDBP
HNRNPH2ENSG00000126945.8849.910301427.58800-0.7482013.1073012.15700HepG2TIAL1
HNRNPH2ENSG00000126945.8969.369601440.35200-0.5713011.0222010.00890HepG2TRIM56
HNRNPH2ENSG00000126945.81821.443101491.877700.287902.027401.48050HepG2U2AF1
HNRNPH2ENSG00000126945.8643.70680856.87760-0.412702.729501.97420HepG2UCHL5
HNRNPH2ENSG00000126945.81129.461101427.89090-0.338302.184201.53400HepG2XRN2
HNRNPH2ENSG00000126945.81453.771301740.15520-0.259403.714903.10610HepG2ZNF622
HNRNPH2ENSG00000126945.81839.187701500.306100.293703.701203.06260K562AGGF1
HNRNPH2ENSG00000126945.82043.246201561.139500.388203.883303.10770K562AKAP8L
HNRNPH2ENSG00000126945.85516.966802979.977800.8885019.3467017.96390K562AQR
HNRNPH2ENSG00000126945.81907.838401638.016700.219902.091101.30560K562ATP5C1
HNRNPH2ENSG00000126945.81188.423301744.02940-0.553409.457206.93320K562BCCIP
HNRNPH2ENSG00000126945.81925.354503756.95260-0.964406.506704.82870K562CNOT7
HNRNPH2ENSG00000126945.81670.968802195.02020-0.393504.143503.18190K562CPSF6
HNRNPH2ENSG00000126945.81506.264501962.81620-0.381904.975303.32450K562DDX21
HNRNPH2ENSG00000126945.81128.781601477.82190-0.388705.268503.43380K562DDX27
HNRNPH2ENSG00000126945.82062.190902886.41700-0.4851010.497109.32060K562DDX47
HNRNPH2ENSG00000126945.81140.807601481.23370-0.376704.999203.34490K562EIF2S1
HNRNPH2ENSG00000126945.81723.863202126.51140-0.302803.709602.89860K562EIF2S2
HNRNPH2ENSG00000126945.8426.44460795.09150-0.898804.781603.42100K562EIF3A
HNRNPH2ENSG00000126945.8766.183501534.42830-1.0019012.4939010.12420K562EIF3D
HNRNPH2ENSG00000126945.81090.132401566.89060-0.523405.435504.33340K562EIF3G
HNRNPH2ENSG00000126945.8971.756301268.76150-0.384804.214002.73630K562EIF4B
HNRNPH2ENSG00000126945.83166.706203671.72620-0.213502.284301.42710K562EIF4G2
HNRNPH2ENSG00000126945.81496.579001913.31760-0.354403.683302.44190K562HNRNPA1
HNRNPH2ENSG00000126945.8924.109801539.86460-0.736706.589905.70860K562HNRNPC
HNRNPH2ENSG00000126945.82708.452801996.161800.440104.019102.49240K562HNRNPK
HNRNPH2ENSG00000126945.82122.673202608.62390-0.297402.773601.71760K562HNRNPL
HNRNPH2ENSG00000126945.82140.487602952.81410-0.464205.244504.16570K562HSPD1
HNRNPH2ENSG00000126945.81519.467701998.62840-0.395402.699401.68840K562IGF2BP2
HNRNPH2ENSG00000126945.82402.756301656.748800.536207.558906.02930K562KIF1C
HNRNPH2ENSG00000126945.81062.340801561.17490-0.555403.494701.79720K562LIN28B
HNRNPH2ENSG00000126945.81648.179602100.49280-0.349903.488202.53880K562MAGOH
HNRNPH2ENSG00000126945.81659.759502096.23350-0.336803.354002.32620K562MATR3
HNRNPH2ENSG00000126945.82657.300201855.978600.517707.322405.70580K562MBNL1
HNRNPH2ENSG00000126945.82053.153601300.907500.658205.806804.35950K562NAA15
HNRNPH2ENSG00000126945.81977.373502405.65020-0.282803.783302.92650K562NSUN2
HNRNPH2ENSG00000126945.81385.089901759.42490-0.345102.399801.62660K562PCBP3
HNRNPH2ENSG00000126945.81052.288101349.51810-0.358903.386402.49350K562POLR2G
HNRNPH2ENSG00000126945.82073.700701394.401900.572506.762905.58990K562PRPF8
HNRNPH2ENSG00000126945.82481.074201548.201000.680309.288008.34300K562PUS1
HNRNPH2ENSG00000126945.81011.388901470.23750-0.539703.060801.56080K562RAVER1
HNRNPH2ENSG00000126945.82293.813301508.506000.604505.845105.01030K562RBM15
HNRNPH2ENSG00000126945.8827.303701259.21550-0.606004.751303.44890K562RCC2
HNRNPH2ENSG00000126945.8970.786001420.49550-0.549204.251903.23660K562RPS19
HNRNPH2ENSG00000126945.8998.168101269.12160-0.346502.196801.31380K562RPS3
HNRNPH2ENSG00000126945.8963.303401202.51860-0.320002.451201.43610K562SAFB
HNRNPH2ENSG00000126945.8977.168601225.33980-0.326502.538201.53680K562SRSF4
HNRNPH2ENSG00000126945.81402.107001889.43420-0.430404.255102.90830K562SRSF5
HNRNPH2ENSG00000126945.81543.250601953.11290-0.339803.391202.47140K562TIA1
HNRNPH2ENSG00000126945.8857.485401327.92480-0.631005.171303.85070K562TIAL1
HNRNPH2ENSG00000126945.82113.369002550.75040-0.271403.093902.33600K562UPF1
HNRNPH2ENSG00000126945.81681.892202182.61540-0.376004.202303.11480K562WDR3
HNRNPH2ENSG00000126945.81713.437602269.53710-0.405506.537005.28760K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HNRNPH2 is not available on ENCORE database.





2 RBPs can affect the splicing of HNRNPH2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A5SSHNRNPH2ENSG00000126945.8chrX+1006632821006633071006632821006632951006669231006691210.113000.000000.00016longerK562RBM22
A5SSHNRNPH2ENSG00000126945.8chrX+100663282100663307100663282100663295100666923100669121-0.073000.000410.03923shorterHepG2U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for HNRNPH2 is not avaliable on ENCORE database.