ELMSAN1

General Information

Gene Name       : ELMSAN1
Gene ID             : ENSG00000156030.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ELMSAN1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ELMSAN1ENSG00000156030.1312.5617.5815.07ENCSR000AEF
HepG2ELMSAN1ENSG00000156030.138.605.987.29ENCSR985KAT
K562ELMSAN1ENSG00000156030.1311.7310.8111.27ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ELMSAN1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ELMSAN1 RNA is bound by 25 proteins.  







eCLIP assay for ELMSAN1 is not avaliable on ENCORE database.





25 proteins are bound to ELMSAN1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr147418186074181943-3'-UTR,intron-Distal4.988514.80693HepG2FUBP3
chr147418251774182591-3'-UTR,intron-Distal3.518325.02737K562IGF2BP2
chr147418477574184886-3'-UTR,intron-Distal4.2362116.94237K562UPF1
chr147418554974185648-3'-UTR,intron-Distal,intron-Proximal3.768545.42720K562UCHL5
chr147418942174189555-3'-UTR,CDS,intron-Distal,intron-Proximal3.167215.14343HepG2PPIG
chr147418436374184418-3'-UTR,intron-Distal4.0250512.35474K562UPF1
chr147420692374207011-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.979973.15719K562SMNDC1
chr147418930974189413-3'-UTR,CDS,intron-Distal,intron-Proximal3.564385.66421K562PRPF8
chr147418424074184360-3'-UTR,intron-Distal4.3266319.10057K562UPF1
chr147418586874185918-3'-UTR,intron-Distal,intron-Proximal4.294784.42734K562UCHL5
chr147418195274182013-3'-UTR,intron-Distal6.6525267.41745K562PUM2
chr147420694974207011-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.435876.96160K562SF3B4
chr147418941174189556-3'-UTR,CDS,intron-Distal,intron-Proximal3.403654.61143K562UCHL5
chr147418480274184869-3'-UTR,intron-Distal4.479545.41597HepG2UPF1
chr147418930774189403-3'-UTR,CDS,intron-Distal,intron-Proximal4.199634.89208K562AQR
chr147419351974193579-3'-UTR,CDS,intron-Distal,intron-Proximal4.543454.38106HepG2PPIG
chr147418802274188092-3'-UTR,CDS,intron-Distal4.657825.01312K562UCHL5
chr147419355974193690-3'-UTR,CDS,intron-Distal,intron-Proximal4.385519.63469HepG2BUD13
chr147418613974186199-3'-UTR,CDS,intron-Distal3.203683.50696K562BUD13
chr147419363474193706-3'-UTR,CDS,intron-Distal,intron-Proximal3.441565.12722K562BUD13
chr147419269274192747-3'-UTR,CDS,intron-Distal,intron-Proximal3.693514.40430HepG2AQR
chr147418219974182239-3'-UTR,intron-Distal4.5632216.75955K562PUM2
chr147419356774193664-3'-UTR,CDS,intron-Distal3.844335.14848K562ZNF622
chr147418514074185201-3'-UTR,intron-Distal5.523867.22752K562AKAP1
chr147418527674185334-3'-UTR,intron-Distal3.262603.04831K562RBM15
chr147418205574182093-3'-UTR,intron-Distal4.545374.85237K562UPF1
chr147419272574192825-3'-UTR,CDS,intron-Distal,intron-Proximal4.845415.82303K562BUD13
chr147418514374185199-3'-UTR,intron-Distal3.046374.87047K562FAM120A
chr147418217874182261-3'-UTR,intron-Distal3.161465.99038K562UPF1
chr147418204374182108-3'-UTR,intron-Distal4.2611619.33586K562PUM2
chr147418186074181915-3'-UTR,intron-Distal5.4543714.52874K562PUM2
chr147419195174192006-3'-UTR,CDS,intron-Distal,intron-Proximal3.517934.13746HepG2PPIG
chr147418587074185939-3'-UTR,intron-Distal,intron-Proximal4.111153.31153K562GTF2F1
chr147418799974188132-3'-UTR,CDS,intron-Distal,intron-Proximal3.682654.86632HepG2G3BP1
chr147418511974185211-3'-UTR,intron-Distal3.963696.36332HepG2UPF1
chr147418392674183969-3'-UTR,intron-Distal5.4341810.00893K562UPF1
chr147418213674182160-3'-UTR,intron-Distal4.974067.80881K562PUM2
chr147420664974206714-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.326364.30677K562YBX3
chr147419407374194162-3'-UTR,CDS,intron-Distal,intron-Proximal3.8616410.95071HepG2PRPF8
chr147418468874184730-3'-UTR,intron-Distal5.146697.21253K562UPF1
chr147418408274184103-3'-UTR,intron-Distal4.892946.02674K562UPF1
chr147418196074182004-3'-UTR,intron-Distal4.601054.32097HepG2FUBP3
chr147419366174193729-3'-UTR,CDS,intron-Distal,intron-Proximal3.802185.82046K562SF3B4
chr147418802474188076-3'-UTR,CDS,intron-Distal3.545374.14074K562UPF1
chr147418492574185034-3'-UTR,intron-Distal5.029317.98718HepG2UPF1
chr147422671574226781-5'-UTR,intron-Distal3.761126.49292HepG2CSTF2T
chr147422648674226571-5'-UTR,intron-Distal3.472434.47051K562EWSR1
chr147419329674193307-intron-Distal,intron-Proximal5.4860716.41423K562AQR
chr147419415274194161-intron-Distal,intron-Proximal5.5591517.79119K562AQR
chr147420695974207015-intron-Distal,intron-Proximal3.132763.33980HepG2SF3B4
chr147422517774225235-intron-Distal3.808836.00449HepG2FAM120A
chr147419396774194134-intron-Distal,intron-Proximal3.127146.75365K562PRPF8
chr147422548774225603-intron-Distal3.874263.74713K562FUS
chr147422510774225162-intron-Distal4.244613.82910K562NONO
chr147419625774196342-intron-Distal,intron-Proximal3.727156.42898K562AQR
chr147419409174194115-intron-Distal,intron-Proximal4.353343.70761K562AQR
chr147419323474193296-intron-Distal,intron-Proximal6.7575419.71511K562AQR
chr147422514774225220-intron-Distal3.342074.25110K562CSTF2T
chr147422582874225924-intron-Distal3.319313.74491K562CSTF2T
chr147422526274225311-intron-Distal4.499085.41529HepG2CSTF2T
chr147419620674196317-intron-Distal,intron-Proximal3.141144.87883K562BUD13
chr147419405874194146-intron-Distal,intron-Proximal3.928258.02891K562EFTUD2
chr147419669274196739-intron-Distal,intron-Proximal3.922753.74254HepG2SF3B4
chr147422517774225258-intron-Distal4.686406.14550HepG2NKRF
chr147419409374194153-intron-Distal,intron-Proximal4.869655.58150K562SF3B4
chr147422516174225320-intron-Distal4.313475.73677K562FUS
chr147422516274225224-intron-Distal3.239163.38183K562NONO
chr147419411774194152-intron-Distal,intron-Proximal6.7750122.68660K562AQR
chr147425360074253678-intron-Distal4.561455.74291HepG2FAM120A
chr147419270074192728-intron-Distal,intron-Proximal4.784594.09264K562AQR
chr147419502574195123-intron-Distal4.242664.07596K562GTF2F1
chr147422638074226442-intron-Distal3.135383.46580HepG2CSTF2T
chr147422315974223211-intron-Distal4.7011510.35072HepG2RBFOX2
chr147419368574193728-intron-Distal,intron-Proximal4.879517.45449HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ELMSAN1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ELMSAN1 is not available on ENCORE database.

  • 62 RBPs can affect the levels of ELMSAN1.  








The Knockdown/knockout RNA-Seq assay for ELMSAN1 is not available on ENCORE database.





62 RBPs can affect the gene expression of ELMSAN1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ELMSAN1ENSG00000156030.8573.84940430.623700.414102.492801.54480HepG2ADAR
ELMSAN1ENSG00000156030.8546.66140777.72470-0.508604.089403.37800HepG2BOP1
ELMSAN1ENSG00000156030.8664.13870490.435900.437302.623501.86940HepG2CIRBP
ELMSAN1ENSG00000156030.8723.19370513.491900.493902.953602.31740HepG2DDX6
ELMSAN1ENSG00000156030.8734.74790493.485800.574104.255103.52850HepG2EIF2S1
ELMSAN1ENSG00000156030.8829.44570531.050500.643204.020703.19880HepG2EIF4B
ELMSAN1ENSG00000156030.8724.39450550.388000.396202.251701.62510HepG2FXR1
ELMSAN1ENSG00000156030.8712.46640510.452900.480903.025802.33140HepG2G3BP1
ELMSAN1ENSG00000156030.8715.53090542.058500.400502.382701.55940HepG2G3BP2
ELMSAN1ENSG00000156030.8393.65340483.71870-0.297201.926201.41130HepG2HNRNPU
ELMSAN1ENSG00000156030.8831.47840518.824100.680305.905604.95580HepG2IGF2BP2
ELMSAN1ENSG00000156030.8718.49920553.627800.376001.878301.35340HepG2MATR3
ELMSAN1ENSG00000156030.8971.12450566.640500.777107.518606.49880HepG2NCBP2
ELMSAN1ENSG00000156030.8754.34620424.847600.828205.022803.79720HepG2PABPC1
ELMSAN1ENSG00000156030.8952.31480504.500100.9165010.442009.06070HepG2PABPC4
ELMSAN1ENSG00000156030.8686.23510527.443200.379602.128401.58430HepG2PCBP1
ELMSAN1ENSG00000156030.8523.96330699.21130-0.416304.278503.54250HepG2PUS1
ELMSAN1ENSG00000156030.8758.28470581.278000.383401.949801.41080HepG2QKI
ELMSAN1ENSG00000156030.8716.30470527.527200.441202.536401.88800HepG2RBM25
ELMSAN1ENSG00000156030.8805.85690597.281100.432004.044903.41340HepG2NELFE
ELMSAN1ENSG00000156030.8711.84220556.248800.355702.820002.19800HepG2RECQL
ELMSAN1ENSG00000156030.8461.69540675.23910-0.548504.772503.90790HepG2RPLP0
ELMSAN1ENSG00000156030.81111.06460764.525600.539205.218604.27100HepG2SF3B1
ELMSAN1ENSG00000156030.8871.41780558.785500.641008.652207.69670HepG2SF3B4
ELMSAN1ENSG00000156030.8721.34460583.233000.306502.233201.79630HepG2SRSF1
ELMSAN1ENSG00000156030.8733.94750474.475500.629208.577507.70090HepG2SRSF9
ELMSAN1ENSG00000156030.8770.16780621.486600.309302.064801.32010HepG2TUFM
ELMSAN1ENSG00000156030.81400.40110849.460700.721109.182808.03050HepG2U2AF1
ELMSAN1ENSG00000156030.81265.97670505.372301.324704.978203.62730HepG2U2AF2
ELMSAN1ENSG00000156030.8877.63190657.848000.415802.531901.73270HepG2UBE2L3
ELMSAN1ENSG00000156030.8755.06870937.17850-0.311702.814601.76000HepG2UTP18
ELMSAN1ENSG00000156030.81921.639801327.556000.5335011.0537010.01470K562AGGF1
ELMSAN1ENSG00000156030.81792.733601381.395500.375903.618402.86790K562AKAP8L
ELMSAN1ENSG00000156030.81189.795201653.18670-0.474508.300907.25160K562DDX47
ELMSAN1ENSG00000156030.8867.841401138.44490-0.391604.406303.52630K562EIF2S2
ELMSAN1ENSG00000156030.82178.507301600.596800.444607.380805.86180K562EIF4G2
ELMSAN1ENSG00000156030.8981.166701517.08960-0.628708.236706.91870K562GRSF1
ELMSAN1ENSG00000156030.81411.06170904.782200.641002.702901.50470K562HNRNPA2B1
ELMSAN1ENSG00000156030.8852.57140643.328800.406203.147501.92710K562HNRNPF
ELMSAN1ENSG00000156030.8670.360201083.59160-0.692806.520804.99940K562HNRNPM
ELMSAN1ENSG00000156030.81149.091701786.16050-0.636407.999606.66200K562HSPD1
ELMSAN1ENSG00000156030.81011.01860725.384200.478903.109101.99980K562IGF2BP2
ELMSAN1ENSG00000156030.8956.36110737.814900.374202.911301.68340K562IGF2BP3
ELMSAN1ENSG00000156030.81146.625201384.96390-0.272502.994602.15440K562MTPAP
ELMSAN1ENSG00000156030.81348.825301538.82250-0.190102.114301.45240K562NSUN2
ELMSAN1ENSG00000156030.81216.07860791.376400.619702.558101.61580K562PABPN1
ELMSAN1ENSG00000156030.8864.52670678.305400.349902.421101.50850K562PCBP2
ELMSAN1ENSG00000156030.81177.021101495.52460-0.345502.729001.91410K562PPIG
ELMSAN1ENSG00000156030.81001.38540740.673100.435004.242603.43670K562PTBP1
ELMSAN1ENSG00000156030.81523.202901820.04250-0.256902.379101.48790K562PUM2
ELMSAN1ENSG00000156030.82041.943101369.870500.575807.231206.40040K562PUS1
ELMSAN1ENSG00000156030.81828.860301334.811000.454204.095103.39100K562RBM15
ELMSAN1ENSG00000156030.8967.22970710.218300.445503.768202.77460K562RBM22
ELMSAN1ENSG00000156030.81666.52850973.601000.775303.324701.60630K562RBM39
ELMSAN1ENSG00000156030.8820.92830589.353700.478004.289503.05140K562RCC2
ELMSAN1ENSG00000156030.8486.55980737.32010-0.599704.408603.37370K562RPS19
ELMSAN1ENSG00000156030.8761.308501032.38590-0.439403.091702.02820K562RPS3
ELMSAN1ENSG00000156030.81195.25780723.704100.723702.950201.69370K562SF1
ELMSAN1ENSG00000156030.8802.05660534.248200.586106.558205.20310K562SF3B4
ELMSAN1ENSG00000156030.81511.52420831.176300.862704.192802.57420K562SNRNP200
ELMSAN1ENSG00000156030.8779.31370558.685200.480102.672101.67100K562SRFBP1
ELMSAN1ENSG00000156030.8895.62220660.047300.440203.493602.40740K562TRIM56
ELMSAN1ENSG00000156030.8752.07720497.999000.594604.391002.94890K562U2AF1
ELMSAN1ENSG00000156030.8818.02630514.377400.669208.233706.83300K562U2AF2
ELMSAN1ENSG00000156030.8575.35150741.75410-0.366502.210401.30800K562UCHL5
ELMSAN1ENSG00000156030.81166.432301631.64580-0.484209.064607.85690K562UPF1
ELMSAN1ENSG00000156030.81202.293501451.82940-0.272103.294702.37860K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ELMSAN1 is not available on ENCORE database.





1 RBPs can affect the splicing of ELMSAN1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSELMSAN1ENSG00000156030.8chr14-7418940074189645741894007418955074191974741921130.195000.000010.00010longerK562AQR
A3SSELMSAN1ENSG00000156030.8chr14-741894007418960174189400741895677419197474192113-0.497000.021110.09981shorterK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ELMSAN1 is not avaliable on ENCORE database.