DEDD2

General Information

Gene Name       : DEDD2
Gene ID             : ENSG00000160570.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: DEDD2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DEDD2ENSG00000160570.133.198.495.84ENCSR000AEF
HepG2DEDD2ENSG00000160570.1313.098.4710.78ENCSR985KAT
K562DEDD2ENSG00000160570.1322.5922.8622.73ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DEDD2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DEDD2 RNA is bound by 15 proteins.  







eCLIP assay for DEDD2 is not avaliable on ENCORE database.





15 proteins are bound to DEDD2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr194270352242703573-3'-UTR,intron-Distal,intron-Proximal3.169403.04831K562RBM15
chr194270320242703282-3'-UTR,intron-Distal4.142913.25872K562IGF2BP1
chr194270301742703073-3'-UTR,intron-Distal5.085388.52455K562PABPC4
chr194270294942703008-3'-UTR,intron-Distal3.912336.76837K562UPF1
chr194270349442703565-3'-UTR,intron-Distal,intron-Proximal3.211664.61367K562UPF1
chr194270285942702904-3'-UTR,intron-Distal4.983426.75316K562YBX3
chr194270343842703485-3'-UTR,intron-Distal,intron-Proximal3.490023.34231K562RBM15
chr194270287842702948-3'-UTR,intron-Distal4.140446.48274K562UPF1
chr194270290442702934-3'-UTR,intron-Distal5.6495015.69309K562YBX3
chr194270300842703045-3'-UTR,intron-Distal4.330183.69433K562UPF1
chr194270327842703326-3'-UTR,intron-Distal3.467643.88579K562IGF2BP2
chr194270280642702847-3'-UTR,intron-Distal3.717533.25175K562YBX3
chr194270312742703216-3'-UTR,intron-Distal3.996428.00923K562IGF2BP2
chr194272113842721239-5'-UTR,CDS,intron-Distal,intron-Proximal3.546466.14054K562PRPF8
chr194272106742721184-5'-UTR,CDS,intron-Distal4.556157.97419K562DDX3X
chr194272166742721773-5'-UTR,intron-Distal4.260148.27931K562AQR
chr194272108742721233-5'-UTR,CDS,intron-Distal,intron-Proximal3.266903.48399HepG2CSTF2T
chr194272174042721801-5'-UTR,intron-Distal4.414054.94356HepG2PRPF8
chr194270361442703656-CDS,intron-Distal,intron-Proximal3.997343.15006K562RBM15
chr194270368642703767-CDS,intron-Distal,intron-Proximal4.325374.46921K562RBM15
chr194270397142704059-CDS,intron-Distal3.456243.67894HepG2AQR
chr194270359242703623-CDS,intron-Distal,intron-Proximal4.078933.20319K562UPF1
chr194271377742713866-CDS,intron-Distal,intron-Proximal5.027316.44303K562AQR
chr194272160442721747-intron-Distal4.5599515.96409K562AKAP8L
chr194272127842721345-intron-Distal,intron-Proximal4.073874.10564HepG2CSTF2T
chr194271124242711326-intron-Distal3.891514.09469HepG2XPO5
chr194271549342715616-intron-Distal5.693939.42242HepG2PCBP2
chr194272155342721674-intron-Distal3.496616.37265K562CSTF2T
chr194272163042721750-intron-Distal4.993879.40065K562EFTUD2
chr194271547542715571-intron-Distal3.780605.45745K562ILF3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DEDD2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DEDD2 is not available on ENCORE database.

  • 72 RBPs can affect the levels of DEDD2.  








The Knockdown/knockout RNA-Seq assay for DEDD2 is not available on ENCORE database.





72 RBPs can affect the gene expression of DEDD2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DEDD2ENSG00000160570.9402.67270285.265000.497203.844903.14980HepG2ACO1
DEDD2ENSG00000160570.9267.90850183.195000.548302.615301.64400HepG2ADAR
DEDD2ENSG00000160570.9432.73840286.585700.594405.154904.13630HepG2AKAP8L
DEDD2ENSG00000160570.9488.14400317.684500.619606.089205.13330HepG2AUH
DEDD2ENSG00000160570.9536.37660287.494100.899608.768107.77490HepG2BOP1
DEDD2ENSG00000160570.9123.39600218.23120-0.822602.002601.35630HepG2CNOT7
DEDD2ENSG00000160570.9402.41840263.929500.608403.675202.89380HepG2CPSF6
DEDD2ENSG00000160570.9349.18900256.341900.445802.006201.44200HepG2CELF1
DEDD2ENSG00000160570.9265.65470188.126100.497802.409301.33030HepG2DDX1
DEDD2ENSG00000160570.9656.65780362.619800.856607.721606.72430HepG2DDX3X
DEDD2ENSG00000160570.9612.65550311.555900.975508.593407.56360HepG2DDX6
DEDD2ENSG00000160570.9293.35500184.468200.669204.457903.58120HepG2DNAJC21
DEDD2ENSG00000160570.9275.61730182.839900.592003.922903.17350HepG2DNAJC2
DEDD2ENSG00000160570.9473.82160364.745900.377402.380601.81530HepG2ETF1
DEDD2ENSG00000160570.9213.92490352.83640-0.721905.158604.09550HepG2FUBP3
DEDD2ENSG00000160570.9194.62070328.88680-0.756904.562903.40810HepG2G3BP2
DEDD2ENSG00000160570.9435.16410299.169100.540502.826802.17990HepG2GPKOW
DEDD2ENSG00000160570.9305.76390184.817600.726203.619002.03690HepG2HNRNPA0
DEDD2ENSG00000160570.9302.04890207.152700.544002.587401.91460HepG2HNRNPC
DEDD2ENSG00000160570.9448.28560307.040800.545905.252104.30330HepG2HNRNPF
DEDD2ENSG00000160570.9199.69500320.75510-0.683704.481903.30290HepG2HNRNPM
DEDD2ENSG00000160570.9281.02750205.783100.449502.449101.87680HepG2HNRNPU
DEDD2ENSG00000160570.9438.88480302.353800.537503.393202.59750HepG2IGF2BP1
DEDD2ENSG00000160570.9284.57260210.200600.436902.472001.77520HepG2ILF2
DEDD2ENSG00000160570.9520.32800343.821200.597703.693102.96540HepG2NCBP2
DEDD2ENSG00000160570.9375.24710199.551800.911004.756403.57080HepG2PABPC1
DEDD2ENSG00000160570.9384.17890260.947300.557903.178502.54590HepG2PUF60
DEDD2ENSG00000160570.9556.41120276.795901.0072011.8125010.48070HepG2PUM2
DEDD2ENSG00000160570.9531.75910304.859800.802508.897408.09000HepG2RBM22
DEDD2ENSG00000160570.9261.66060183.258900.513702.878502.22430HepG2SAFB2
DEDD2ENSG00000160570.9879.55060437.328801.007909.691908.37030HepG2SF3A3
DEDD2ENSG00000160570.9450.37690282.583600.672404.754303.85020HepG2SF3B1
DEDD2ENSG00000160570.9273.95240185.233600.564502.469401.56830HepG2SMNDC1
DEDD2ENSG00000160570.9295.16370125.779801.230503.811002.21190HepG2SNRNP200
DEDD2ENSG00000160570.9472.61030314.427000.587802.620501.86130HepG2SNRNP70
DEDD2ENSG00000160570.9691.00470344.327301.0048017.4426016.46930HepG2SRFBP1
DEDD2ENSG00000160570.9264.83110372.30990-0.491403.026302.53690HepG2SRSF1
DEDD2ENSG00000160570.9379.31250257.619300.558003.849403.13280HepG2SRSF5
DEDD2ENSG00000160570.9349.05040190.954100.870104.203802.81680HepG2STIP1
DEDD2ENSG00000160570.9161.79420334.64490-1.048509.800908.84990HepG2TAF15
DEDD2ENSG00000160570.9224.57710307.49500-0.453402.390001.61110HepG2TIA1
DEDD2ENSG00000160570.9283.94640199.956000.505802.731702.23390HepG2TIAL1
DEDD2ENSG00000160570.9292.22450201.744300.534403.456802.84210HepG2TRIM56
DEDD2ENSG00000160570.9747.47400397.704200.910209.439608.26640HepG2U2AF1
DEDD2ENSG00000160570.9472.29210146.393001.689704.923203.57960HepG2U2AF2
DEDD2ENSG00000160570.9564.37780426.553500.403803.712903.10420HepG2ZNF622
DEDD2ENSG00000160570.9871.52160672.645700.373601.905201.35910K562AKAP8L
DEDD2ENSG00000160570.91740.50900838.607501.053309.733508.73770K562AQR
DEDD2ENSG00000160570.9731.41740548.756600.414402.619301.60170K562CCAR1
DEDD2ENSG00000160570.9518.68320357.308700.537602.652801.76160K562EFTUD2
DEDD2ENSG00000160570.9616.93840372.308700.728507.189005.87030K562EIF4A3
DEDD2ENSG00000160570.9455.02480335.282200.440503.237301.96950K562EIF4B
DEDD2ENSG00000160570.91151.64750739.386700.639207.110005.69050K562FIP1L1
DEDD2ENSG00000160570.9614.68450387.185000.666707.397506.47200K562FXR1
DEDD2ENSG00000160570.948.19920147.51180-1.613708.247506.89430K562G3BP2
DEDD2ENSG00000160570.91215.41580938.465200.373003.118702.31820K562GRSF1
DEDD2ENSG00000160570.91086.45900602.477300.8506012.4497011.25910K562HNRNPC
DEDD2ENSG00000160570.9408.85010249.517200.712304.229002.84550K562IGF2BP2
DEDD2ENSG00000160570.9354.44510253.741100.482102.695401.52450K562IGF2BP3
DEDD2ENSG00000160570.9499.15390262.105000.9292010.375408.68420K562MAGOH
DEDD2ENSG00000160570.9399.12720261.553900.609604.531103.32430K562MATR3
DEDD2ENSG00000160570.9370.22430256.267200.530703.466901.94790K562PCBP1
DEDD2ENSG00000160570.9536.91820347.707100.626703.760502.88610K562PRPF8
DEDD2ENSG00000160570.9425.06900254.661000.739006.608105.61650K562PTBP1
DEDD2ENSG00000160570.91643.489601122.102400.550503.806902.85380K562PUF60
DEDD2ENSG00000160570.9870.340101193.46580-0.455504.777203.34440K562PUM1
DEDD2ENSG00000160570.9984.38610667.158900.561102.722602.18260K562PUS1
DEDD2ENSG00000160570.91037.05910649.980400.673902.892302.28720K562RBM15
DEDD2ENSG00000160570.9372.77980244.119700.610604.056803.01940K562RBM22
DEDD2ENSG00000160570.9646.19250492.937100.390502.701601.72220K562RCC2
DEDD2ENSG00000160570.9466.88620296.288400.656003.898902.68530K562RPS3
DEDD2ENSG00000160570.9799.88890433.888700.882403.366802.00360K562SF1
DEDD2ENSG00000160570.9288.45480153.294700.911907.224205.80220K562SF3B4
DEDD2ENSG00000160570.9984.58120528.858500.896504.137202.41510K562SFPQ
DEDD2ENSG00000160570.9628.10040467.283400.426602.715901.70420K562SRFBP1
DEDD2ENSG00000160570.9400.13880249.667000.680404.441403.54980K562SRSF1
DEDD2ENSG00000160570.9441.69100285.957500.627103.593802.37180K562SRSF4
DEDD2ENSG00000160570.9328.51960235.827200.478102.492501.50340K562SRSF5
DEDD2ENSG00000160570.9694.34500970.15730-0.482604.048402.38350K562SSRP1
DEDD2ENSG00000160570.9503.54950252.648400.994903.516802.71560K562TARDBP
DEDD2ENSG00000160570.9393.78240243.716100.692104.965303.81800K562TIA1
DEDD2ENSG00000160570.9805.78660552.062300.545504.567003.28170K562TRIM56
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DEDD2 is not available on ENCORE database.





14 RBPs can affect the splicing of DEDD2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDEDD2ENSG00000160570.9chr19-4272178342721981427192994271940442724225427242920.392000.000080.00264includedK562SRSF1
SEDEDD2ENSG00000160570.9chr19-427208314272119742719299427194044272178342721981-0.331000.000000.00006excludedK562SRSF1
SEDEDD2ENSG00000160570.9chr19-4272083142721197427193794271940442721783427219810.355000.000230.00998includedK562AKAP8L
SEDEDD2ENSG00000160570.9chr19-427208314272119742719379427194044272178342721981-0.248000.000010.00136excludedK562XRCC6
SEDEDD2ENSG00000160570.9chr19-4272083142721197427192844271940442721783427218340.610000.000600.00915includedHepG2U2AF2
SEDEDD2ENSG00000160570.9chr19-427208314272119742719379427194044272178342721834-0.443000.000000.00004excludedK562FXR1
SEDEDD2ENSG00000160570.9chr19-4272083142721197427193794271940442724225427242750.507000.005610.06797includedK562PUS1
SEDEDD2ENSG00000160570.9chr19-4272083142721197427193794271940442721783427218340.299000.000440.04117includedHepG2DDX6
SEDEDD2ENSG00000160570.9chr19-4272083142721197427192994271940442724225427242750.415000.002530.06770includedK562UTP18
SEDEDD2ENSG00000160570.9chr19-4272083142721197427193794271940442724225427242750.522000.002290.05091includedK562RBM15
SEDEDD2ENSG00000160570.9chr19-4272083142721197427193794271940442721783427219810.375000.000340.01196includedK562AGGF1
SEDEDD2ENSG00000160570.9chr19-427208314272119742719299427194044272178342721981-0.311000.000170.01171excludedK562HNRNPK
SEDEDD2ENSG00000160570.9chr19-4272178342721981427192994271940442724225427242920.431000.000040.00316includedK562PTBP1
SEDEDD2ENSG00000160570.9chr19-427208314272119742719299427194044272178342721981-0.282000.000570.02585excludedK562PTBP1
SEDEDD2ENSG00000160570.9chr19-427208314272119742719299427194044272178342721821-0.186000.000360.00801excludedK562HNRNPC
A3SSDEDD2ENSG00000160570.9chr19-4271385142714056427138514271399242719284427194040.115000.000000.00000longerK562AQR
MXEDEDD2ENSG00000160570.9chr19-4272083142721197427217834272198142719284427194044272422542724275-0.340000.004870.099422includedK562RBM15
MXEDEDD2ENSG00000160570.9chr19-4272083142721197427217834272198142719284427194044272422542724275-0.417000.000340.016852includedK562AGGF1
MXEDEDD2ENSG00000160570.9chr19-4272083142721197427217834272198142719284427194044272422542724275-0.440000.000100.007052includedK562AKAP8L

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DEDD2 is not avaliable on ENCORE database.