CNOT2

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CNOT2	ENSG00000111596.12	65.84	60.87	63.36	ENCSR000AEF
HepG2	CNOT2	ENSG00000111596.12	52.02	48.37	50.20	ENCSR985KAT
K562	CNOT2	ENSG00000111596.12	66.66	66.79	66.72	ENCSR000AEO

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Linked Antibody	Controls	Method	Note
knockdown followed by RNA-seq	CNOT2-BGKcLV23-K562	ENCSR663BBL	CNOT2	K562	Released		ENCSR877JEM	CRISPR	KD% = 71.6,75.8
knockdown followed by RNA-seq	CNOT2-BGHcLV24-HepG2	ENCSR918MUU	CNOT2	HepG2	Released		ENCSR671FDZ	CRISPR	KD% = 73.0,73.0

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project
CNOT2	K562	CRISPR			BGKcLV21-9,BGKcLV21-10	BGKcLV21-1,BGKcLV21-2	0.0,0.0	NotSatisfied	ENCODE4
CNOT2	K562	CRISPR	ENCSR663BBL	ENCSR877JEM	CNOT2-BGKcLV23-29,CNOT2-BGKcLV23-30	NT-BGKcLV23-1,NT-BGKcLV23-2	71.6,75.8	Released	ENCODE4
CNOT2	HepG2	CRISPR			BGHcLV22-11,BGHcLV22-12	BGHcLV22-1,BGHcLV22-2	0.0,0.0	NotSatisfied	ENCODE4
CNOT2	HepG2	CRISPR	ENCSR918MUU	ENCSR671FDZ	CNOT2-BGHcLV24-21,CNOT2-BGHcLV24-22	NT-BGHcLV24-1,NT-BGHcLV24-2	73.0,73.0	Released	ENCODE4
CNOT2	293T	shRNA			CNOT2-BG293LV02-3,CNOT2-BG293LV02-4	NT-BG293LV02-1,NT-BG293LV02-2	,	Revoked	ENCORE2
CNOT2	293T	shRNA			CNOT2-BG293LV06-21,CNOT2-BG293LV06-22	NT-BG293LV06-1,NT-BG293LV06-2	,	Sequenced	ENCORE2

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CNOT2 is not avaliable on ENCORE database.

Proteins bound to RNA

CNOT2 RNA is bound by 36 proteins.

eCLIP assay for CNOT2 is not avaliable on ENCORE database.

36 proteins are bound to CNOT2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	70732230	70732343	+	3'-UTR,5'-UTR,CDS	3.02993	4.73488	HepG2	GRWD1
chr12	70732282	70732344	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.63161	10.19430	HepG2	BCLAF1
chr12	70748315	70748383	+	3'-UTR	5.15535	6.34419	K562	PUM2
chr12	70729175	70729238	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.52371	9.35995	K562	SF3B4
chr12	70732227	70732282	+	3'-UTR,5'-UTR,CDS	3.06734	4.51709	HepG2	BCLAF1
chr12	70748226	70748302	+	3'-UTR	3.77222	4.23488	K562	FAM120A
chr12	70671961	70672059	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.33986	4.07830	K562	SRSF1
chr12	70704690	70704794	+	3'-UTR,CDS	3.41554	7.02567	HepG2	BCLAF1
chr12	70687938	70688015	+	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	5.27741	5.66159	K562	LIN28B
chr12	70704672	70704765	+	3'-UTR,CDS,intron-Proximal	4.82910	7.41350	HepG2	GRWD1
chr12	70671961	70672022	+	3'-UTR,5'-UTR,CDS	3.22509	4.34695	HepG2	BCLAF1
chr12	70739958	70740110	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.50155	5.59924	K562	GRWD1
chr12	70729313	70729373	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.72622	7.85990	HepG2	PRPF8
chr12	70731292	70731363	+	3'-UTR,5'-UTR,CDS,intron-Proximal	5.10058	5.02942	K562	EFTUD2
chr12	70740063	70740117	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.11390	3.55800	HepG2	BCLAF1
chr12	70671911	70671959	+	3'-UTR,5'-UTR,intron-Proximal	3.52772	8.63117	K562	ZNF622
chr12	70740002	70740057	+	3'-UTR,5'-UTR,CDS,intron-Distal	3.64465	6.39464	HepG2	BCLAF1
chr12	70739959	70740045	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.30841	3.05161	HepG2	PPIG
chr12	70687942	70688058	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.35018	3.51818	HepG2	LIN28B
chr12	70748387	70748455	+	3'-UTR	4.64810	11.84897	K562	PUM2
chr12	70732297	70732346	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.41331	4.92880	K562	ZNF622
chr12	70739957	70740051	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.55073	5.28199	HepG2	GRWD1
chr12	70724230	70724271	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.01659	4.16517	K562	KHSRP
chr12	70637106	70637180	+	5'-UTR,intron-Proximal	3.90137	3.28989	K562	RBM15
chr12	70672024	70672058	+	5'-UTR,CDS,intron-Proximal	4.16956	3.80193	HepG2	GRWD1
chr12	70637486	70637555	+	5'-UTR,intron-Distal	5.39150	9.90275	HepG2	GTF2F1
chr12	70728138	70728225	+	5'-UTR,intron-Distal	3.19549	3.78824	HepG2	KHSRP
chr12	70737890	70737948	+	5'-UTR,CDS,intron-Proximal	4.01943	5.63851	K562	SF3B4
chr12	70637221	70637263	+	5'-UTR,intron-Proximal	3.09459	5.44868	K562	ZNF622
chr12	70637595	70637634	+	5'-UTR,intron-Distal	3.40796	3.73797	K562	CSTF2T
chr12	70637487	70637551	+	5'-UTR,intron-Distal	4.70069	6.58205	HepG2	PRPF4
chr12	70637486	70637533	+	5'-UTR,intron-Distal	4.04012	10.90017	HepG2	FAM120A
chr12	70637489	70637570	+	5'-UTR,intron-Distal	4.10576	16.42308	K562	CSTF2T
chr12	70672045	70672148	+	5'-UTR,CDS,intron-Proximal	3.45874	6.00234	K562	KHSRP
chr12	70737899	70737957	+	5'-UTR,CDS,intron-Proximal	3.78441	5.24705	K562	BUD13
chr12	70637839	70637947	+	5'-UTR,intron-Distal	4.18238	3.86368	HepG2	HNRNPM
chr12	70637487	70637547	+	5'-UTR,intron-Distal	4.37809	4.43799	HepG2	CSTF2T
chr12	70637489	70637567	+	5'-UTR,intron-Distal	3.43616	3.28007	HepG2	NKRF
chr12	70637487	70637566	+	5'-UTR,intron-Distal	5.60261	8.83340	K562	GTF2F1
chr12	70730450	70730573	+	5'-UTR,intron-Distal	4.63238	6.96007	HepG2	XPO5
chr12	70637587	70637666	+	5'-UTR,intron-Distal	4.80171	7.23918	HepG2	PRPF4
chr12	70731377	70731448	+	5'-UTR,intron-Distal,intron-Proximal	3.73095	5.32884	K562	KHSRP
chr12	70739959	70740002	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.08320	3.17233	HepG2	BCLAF1
chr12	70731338	70731442	+	5'-UTR,intron-Distal,intron-Proximal	5.67391	9.36266	K562	QKI
chr12	70732493	70732557	+	CDS	3.26385	3.94979	HepG2	BCLAF1
chr12	70640959	70641024	+	intron-Distal	3.17119	4.07077	HepG2	HNRNPC
chr12	70659123	70659199	+	intron-Distal	4.87449	12.92095	HepG2	PTBP1
chr12	70706292	70706362	+	intron-Distal	3.89797	3.27714	HepG2	HNRNPL
chr12	70676235	70676295	+	intron-Distal	3.96353	4.33574	K562	U2AF2
chr12	70733691	70733796	+	intron-Distal	4.55504	5.31529	HepG2	SUGP2
chr12	70683526	70683643	+	intron-Distal	4.09514	14.41060	K562	QKI
chr12	70657666	70657736	+	intron-Distal	4.34593	3.54147	K562	HNRNPM
chr12	70702072	70702169	+	intron-Distal	4.39609	4.24478	HepG2	CSTF2
chr12	70682804	70682893	+	intron-Distal	3.13924	3.33633	HepG2	MATR3
chr12	70666717	70666782	+	intron-Distal	3.06504	3.00914	HepG2	PTBP1
chr12	70681340	70681422	+	intron-Distal	3.32909	8.21744	K562	KHSRP
chr12	70658353	70658492	+	intron-Distal	3.64449	10.93835	HepG2	SUGP2
chr12	70649012	70649112	+	intron-Distal	3.33745	3.48890	K562	KHSRP
chr12	70686455	70686574	+	intron-Distal	3.34542	8.66097	K562	KHSRP
chr12	70683830	70683893	+	intron-Distal	4.44651	3.72005	K562	MATR3
chr12	70712569	70712664	+	intron-Distal	3.33058	4.84808	K562	HNRNPL
chr12	70733301	70733359	+	intron-Distal	3.19514	3.87400	K562	RBFOX2
chr12	70723088	70723138	+	intron-Distal,intron-Proximal	3.86035	3.02234	K562	KHSRP
chr12	70712245	70712319	+	intron-Distal	4.01836	7.77652	K562	QKI
chr12	70688081	70688176	+	intron-Distal,intron-Proximal	4.02220	5.35459	K562	KHSRP
chr12	70697707	70697783	+	intron-Distal	3.66477	4.72029	K562	MATR3
chr12	70654387	70654435	+	intron-Distal	4.98301	7.83372	K562	KHSRP
chr12	70681553	70681577	+	intron-Distal	3.78494	7.81851	K562	KHSRP
chr12	70683309	70683347	+	intron-Distal	3.48087	5.06177	HepG2	SUGP2
chr12	70681216	70681273	+	intron-Distal	3.10276	4.77976	K562	KHSRP
chr12	70734105	70734168	+	intron-Distal	3.51847	3.39827	HepG2	MATR3
chr12	70675651	70675727	+	intron-Distal	3.83514	3.49896	K562	KHDRBS1
chr12	70721592	70721671	+	intron-Distal,intron-Proximal	3.98593	3.91772	K562	TARDBP
chr12	70733761	70733938	+	intron-Distal	4.18319	6.21862	K562	MATR3
chr12	70733072	70733136	+	intron-Distal	5.06833	6.19339	K562	PTBP1
chr12	70712564	70712652	+	intron-Distal	4.03891	3.48210	HepG2	HNRNPL
chr12	70682746	70682895	+	intron-Distal	3.53123	9.55311	HepG2	U2AF2
chr12	70683640	70683690	+	intron-Distal	3.90256	3.16986	HepG2	QKI
chr12	70654231	70654294	+	intron-Distal	4.55550	4.07352	K562	KHSRP
chr12	70733049	70733130	+	intron-Distal	4.18232	3.90241	K562	MATR3
chr12	70717591	70717706	+	intron-Distal	3.01614	5.27264	K562	HNRNPL
chr12	70710099	70710160	+	intron-Distal	3.40750	6.59733	K562	KHSRP
chr12	70733130	70733211	+	intron-Distal	4.51527	5.61723	K562	MATR3
chr12	70710419	70710497	+	intron-Distal	5.33000	9.22342	HepG2	QKI
chr12	70710729	70710845	+	intron-Distal	4.40720	11.34175	K562	KHSRP
chr12	70734107	70734209	+	intron-Distal	4.80920	6.48639	K562	MATR3
chr12	70640682	70640717	+	intron-Distal	4.42509	4.38558	HepG2	HNRNPM
chr12	70685881	70685986	+	intron-Distal	3.97063	4.04407	K562	HNRNPL
chr12	70682848	70682898	+	intron-Distal	3.93087	7.62792	HepG2	PTBP1
chr12	70697907	70697958	+	intron-Distal	3.66976	6.96489	K562	EXOSC5
chr12	70637284	70637400	+	intron-Distal,intron-Proximal	5.22957	10.08328	HepG2	PRPF4
chr12	70681204	70681312	+	intron-Distal	4.15076	3.71735	K562	TIA1
chr12	70682741	70682813	+	intron-Distal	5.15799	14.40752	K562	PTBP1
chr12	70705946	70706012	+	intron-Distal	3.13003	5.52899	K562	KHSRP
chr12	70682813	70682908	+	intron-Distal	5.33196	14.40752	K562	PTBP1
chr12	70645751	70645830	+	intron-Distal	3.86454	6.19377	K562	KHSRP
chr12	70641843	70641916	+	intron-Distal	3.77804	7.64049	K562	KHSRP
chr12	70698341	70698421	+	intron-Distal	4.53067	3.01445	K562	EXOSC5
chr12	70688679	70688798	+	intron-Distal	4.40658	9.00535	K562	TARDBP
chr12	70654331	70654387	+	intron-Distal	4.49622	9.85516	K562	KHSRP
chr12	70710160	70710254	+	intron-Distal	4.07611	8.34041	K562	KHSRP
chr12	70658368	70658441	+	intron-Distal	4.56669	4.53244	K562	HNRNPM
chr12	70733457	70733552	+	intron-Distal	3.78053	3.23179	HepG2	RBFOX2
chr12	70697908	70697954	+	intron-Distal	3.41477	4.08528	HepG2	SUGP2
chr12	70682746	70682804	+	intron-Distal	3.15223	3.32889	K562	MATR3
chr12	70694465	70694503	+	intron-Distal	4.05357	3.01456	K562	EXOSC5
chr12	70641535	70641615	+	intron-Distal	3.97344	5.78005	K562	KHSRP
chr12	70681313	70681340	+	intron-Distal	4.25334	9.20471	K562	KHSRP
chr12	70724325	70724383	+	intron-Distal,intron-Proximal	3.67087	4.06013	K562	PRPF8
chr12	70706045	70706164	+	intron-Distal	3.83714	11.05103	K562	KHSRP
chr12	70681216	70681279	+	intron-Distal	3.74175	3.39716	K562	U2AF2
chr12	70734120	70734198	+	intron-Distal	3.38232	3.23702	K562	PTBP1
chr12	70710588	70710656	+	intron-Distal	4.39576	5.07255	HepG2	KHSRP
chr12	70733197	70733251	+	intron-Distal	3.38121	3.35050	HepG2	SUGP2
chr12	70676197	70676290	+	intron-Distal	3.51315	7.76412	HepG2	U2AF2
chr12	70659095	70659174	+	intron-Distal	3.48946	3.68462	HepG2	MATR3
chr12	70694909	70694957	+	intron-Distal	4.16798	3.89080	K562	EXOSC5
chr12	70725381	70725446	+	intron-Distal	3.32665	7.81851	K562	KHSRP
chr12	70715991	70716104	+	intron-Distal	3.26451	3.14580	K562	ILF3
chr12	70733710	70733808	+	intron-Distal	3.28020	3.84589	K562	HNRNPL
chr12	70698350	70698427	+	intron-Distal	3.28073	5.68288	K562	HNRNPM
chr12	70725585	70725702	+	intron-Distal	4.56006	5.31925	HepG2	QKI
chr12	70641436	70641526	+	intron-Distal	4.08328	7.46973	K562	KHSRP
chr12	70668997	70669066	+	intron-Distal	4.22030	3.02234	K562	KHSRP
chr12	70702072	70702192	+	intron-Distal	5.60402	11.99995	K562	FMR1
chr12	70683521	70683575	+	intron-Distal	3.08375	4.80585	K562	KHSRP
chr12	70713504	70713564	+	intron-Distal	3.28340	3.93348	K562	TARDBP
chr12	70682786	70682848	+	intron-Distal	4.24837	13.00530	HepG2	PTBP1
chr12	70682735	70682887	+	intron-Distal	3.19697	8.52014	K562	U2AF2
chr12	70706164	70706206	+	intron-Distal	4.31380	4.10688	K562	KHSRP
chr12	70698344	70698419	+	intron-Distal	4.48740	4.66899	HepG2	HNRNPM
chr12	70734113	70734188	+	intron-Distal	3.48253	4.60009	HepG2	SUGP2
chr12	70733501	70733567	+	intron-Distal	4.00767	3.52436	K562	DROSHA
chr12	70718606	70718691	+	intron-Distal	3.28629	4.01234	HepG2	HNRNPL
chr12	70733489	70733550	+	intron-Distal	4.10555	3.23532	K562	MATR3
chr12	70704834	70704963	+	intron-Distal,intron-Proximal	4.23793	10.71047	K562	PRPF8
chr12	70683529	70683640	+	intron-Distal	5.37976	9.73701	HepG2	QKI
chr12	70659126	70659231	+	intron-Distal	4.88172	11.73060	K562	PTBP1
chr12	70681275	70681313	+	intron-Distal	4.46230	10.04635	K562	KHSRP
chr12	70666377	70666435	+	intron-Distal	4.29211	3.09122	HepG2	PTBP1
chr12	70733625	70733786	+	intron-Distal	3.74173	5.12612	HepG2	HNRNPL
chr12	70724823	70724883	+	intron-Distal	4.49759	6.09994	K562	KHSRP
chr12	70733921	70733964	+	intron-Distal	3.23815	3.10640	HepG2	SUGP2
chr12	70706064	70706153	+	intron-Distal	4.49871	4.83283	HepG2	KHSRP
chr12	70682752	70682786	+	intron-Distal	4.21482	4.27936	HepG2	PTBP1
chr12	70659076	70659125	+	intron-Distal	4.93114	4.90095	K562	PTBP1
chr12	70672990	70673060	+	intron-Distal	3.00384	3.05068	HepG2	U2AF2
chr12	70712274	70712327	+	intron-Distal	5.22875	5.54528	HepG2	QKI
chr12	70710413	70710484	+	intron-Distal	5.32485	7.47823	K562	QKI
chr12	70733451	70733583	+	intron-Distal	4.39129	19.26018	K562	RBFOX2
chr12	70657655	70657717	+	intron-Distal	3.72616	8.14948	HepG2	SUGP2
chr12	70674776	70674822	+	intron-Distal	3.28877	3.35103	HepG2	QKI
chr12	70710419	70710472	+	intron-Distal	3.13191	3.31830	K562	KHSRP
chr12	70737849	70737890	+	intron-Proximal	4.55093	3.91589	K562	SF3B4
chr12	70672083	70672136	+	intron-Proximal	3.79762	3.07287	K562	TIA1
chr12	70704822	70704895	+	intron-Proximal	4.46181	5.32062	K562	EFTUD2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for CNOT2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CNOT2 is not available on ENCORE database.
41 RBPs can affect the levels of CNOT2.

The Knockdown/knockout RNA-Seq assay for CNOT2 is not available on ENCORE database.

41 RBPs can affect the gene expression of CNOT2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CNOT2	ENSG00000111596.7	919.29810	1105.86880	-0.26660	2.49740	1.76460	HepG2	AKAP8L
CNOT2	ENSG00000111596.7	1259.01420	1510.64360	-0.26290	2.94730	2.18580	HepG2	DAZAP1
CNOT2	ENSG00000111596.7	910.88150	1436.36530	-0.65710	6.64320	5.71600	HepG2	DDX3X
CNOT2	ENSG00000111596.7	792.33150	982.07450	-0.30970	2.76880	2.06580	HepG2	DNAJC21
CNOT2	ENSG00000111596.7	790.53810	973.37980	-0.30020	3.28000	2.58080	HepG2	DNAJC2
CNOT2	ENSG00000111596.7	984.10970	1310.90290	-0.41370	2.67150	2.04330	HepG2	EIF4A3
CNOT2	ENSG00000111596.7	1127.36750	858.39170	0.39310	3.31430	2.45890	HepG2	FUBP3
CNOT2	ENSG00000111596.7	790.81430	1102.83380	-0.47980	4.31820	3.46640	HepG2	HNRNPC
CNOT2	ENSG00000111596.7	951.46350	1242.06740	-0.38450	2.89040	2.17590	HepG2	HNRNPK
CNOT2	ENSG00000111596.7	1088.03380	1376.00620	-0.33880	3.51580	2.76320	HepG2	HNRNPL
CNOT2	ENSG00000111596.7	734.60890	1095.54310	-0.57660	9.59570	8.52090	HepG2	HNRNPU
CNOT2	ENSG00000111596.7	990.62400	1361.70620	-0.45900	3.38730	2.68950	HepG2	NCBP2
CNOT2	ENSG00000111596.7	1026.17810	1430.00590	-0.47870	4.79080	4.03230	HepG2	PUF60
CNOT2	ENSG00000111596.7	1261.26490	1516.93570	-0.26630	2.00200	1.42540	HepG2	PUM2
CNOT2	ENSG00000111596.7	1677.98590	1196.35820	0.48800	2.34850	1.69560	HepG2	RAVER1
CNOT2	ENSG00000111596.7	880.45020	1137.76160	-0.36990	5.20530	4.37030	HepG2	SMN1
CNOT2	ENSG00000111596.7	1165.57480	1412.01800	-0.27670	2.69250	2.07270	HepG2	SRSF5
CNOT2	ENSG00000111596.7	1219.26960	1418.24640	-0.21810	2.06760	1.45640	HepG2	SRSF7
CNOT2	ENSG00000111596.7	1282.25250	1605.77180	-0.32460	4.17170	3.43650	HepG2	SUCLG1
CNOT2	ENSG00000111596.7	1108.92510	1405.03040	-0.34140	2.50400	1.80920	HepG2	TARDBP
CNOT2	ENSG00000111596.7	2594.48940	2123.36180	0.28900	4.18020	3.50770	K562	AGGF1
CNOT2	ENSG00000111596.7	2113.48400	2489.49360	-0.23620	2.46610	1.42550	K562	CPEB4
CNOT2	ENSG00000111596.7	1610.48470	1947.53740	-0.27420	2.42800	1.68910	K562	CPSF6
CNOT2	ENSG00000111596.7	1092.44440	1334.36010	-0.28860	2.58990	1.81800	K562	EIF3G
CNOT2	ENSG00000111596.7	2123.59520	1540.17910	0.46330	3.12670	2.36710	K562	G3BP2
CNOT2	ENSG00000111596.7	1677.35840	2160.35990	-0.36510	3.71730	2.84510	K562	GRSF1
CNOT2	ENSG00000111596.7	1841.43240	2328.26660	-0.33840	3.26130	2.10230	K562	HNRNPL
CNOT2	ENSG00000111596.7	1023.31030	1537.13540	-0.58700	9.64560	7.99280	K562	HNRNPU
CNOT2	ENSG00000111596.7	2880.80180	2344.80420	0.29690	2.49280	1.71410	K562	KIF1C
CNOT2	ENSG00000111596.7	1417.84120	1704.65710	-0.26580	3.12160	2.26280	K562	MTPAP
CNOT2	ENSG00000111596.7	1521.57170	1894.01150	-0.31590	5.70560	4.68910	K562	NSUN2
CNOT2	ENSG00000111596.7	1065.49030	1327.73420	-0.31740	2.74380	1.94590	K562	POLR2G
CNOT2	ENSG00000111596.7	1792.38330	2222.05040	-0.31000	2.40490	1.64280	K562	PPIG
CNOT2	ENSG00000111596.7	1231.58110	997.49500	0.30400	2.07120	1.41780	K562	PRPF8
CNOT2	ENSG00000111596.7	1276.19220	1682.30300	-0.39860	4.35950	3.54340	K562	PTBP1
CNOT2	ENSG00000111596.7	3562.48490	2191.22560	0.70100	10.81160	9.78590	K562	PUS1
CNOT2	ENSG00000111596.7	2710.13290	2134.96790	0.34400	4.55580	3.81420	K562	RBM15
CNOT2	ENSG00000111596.7	1222.94400	1613.16240	-0.39950	3.64440	2.66810	K562	RBM22
CNOT2	ENSG00000111596.7	836.61420	1649.21070	-0.97910	20.41780	18.50910	K562	SRSF1
CNOT2	ENSG00000111596.7	1159.25150	1455.76610	-0.32860	2.77740	1.72320	K562	SRSF4
CNOT2	ENSG00000111596.7	1593.99690	1331.73210	0.25920	2.18920	1.45810	K562	SYNCRIP
CNOT2	ENSG00000111596.7	1320.97010	1669.12420	-0.33750	2.55440	1.87250	K562	TARDBP
CNOT2	ENSG00000111596.7	1766.05670	2008.26180	-0.18540	1.96820	1.35540	K562	UPF1
CNOT2	ENSG00000111596.7	2036.28610	1786.95490	0.18830	2.15560	1.40130	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CNOT2 is not available on ENCORE database.

28 RBPs can affect the splicing of CNOT2 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CNOT2	ENSG00000111596.7	chr12	+	70688016	70688074			70671911	70672054	70704674	70704797	0.16400	0.00000	0.00001	included	K562	SRSF1
SE	CNOT2	ENSG00000111596.7	chr12	+	70730508	70730754			70729217	70729343	70731168	70731293	-0.06500	0.00245	0.04296	excluded	K562	SRSF1
SE	CNOT2	ENSG00000111596.7	chr12	+	70726546	70726626			70713077	70713144	70729217	70729246	-0.29200	0.00017	0.00488	excluded	K562	SF3B4
SE	CNOT2	ENSG00000111596.7	chr12	+	70726546	70726626			70724066	70724249	70729217	70729246	-0.10500	0.00000	0.00023	excluded	K562	AKAP8L
SE	CNOT2	ENSG00000111596.7	chr12	+	70695484	70695645			70671911	70672054	70704674	70704797	0.06600	0.00037	0.05067	included	HepG2	HNRNPM
SE	CNOT2	ENSG00000111596.7	chr12	+	70730508	70730754			70729217	70729343	70731168	70731293	0.07100	0.00005	0.00210	included	HepG2	HNRNPK
SE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797			70671911	70672054	70713077	70713144	0.05300	0.00068	0.01013	included	HepG2	U2AF2
SE	CNOT2	ENSG00000111596.7	chr12	+	70688016	70688074			70671911	70672054	70704674	70704797	-0.06100	0.00274	0.03255	excluded	HepG2	U2AF2
SE	CNOT2	ENSG00000111596.7	chr12	+	70731535	70731600			70731116	70731293	70732222	70732343	0.05400	0.00149	0.01708	included	K562	AQR
SE	CNOT2	ENSG00000111596.7	chr12	+	70687850	70688074			70671911	70672054	70704674	70704797	0.06300	0.00008	0.00144	included	K562	AQR
SE	CNOT2	ENSG00000111596.7	chr12	+	70713077	70713144			70704674	70704797	70729217	70729343	-0.07400	0.00072	0.00929	excluded	K562	AQR
SE	CNOT2	ENSG00000111596.7	chr12	+	70736037	70736087			70735886	70735948	70737907	70738008	-0.06300	0.00865	0.07236	excluded	K562	AQR
SE	CNOT2	ENSG00000111596.7	chr12	+	70723202	70723350			70713077	70713144	70729217	70729244	-0.60800	0.00000	0.00000	excluded	K562	PUS1
SE	CNOT2	ENSG00000111596.7	chr12	+	70730508	70730754			70729217	70729343	70731168	70731293	-0.06900	0.00001	0.00642	excluded	K562	KHSRP
SE	CNOT2	ENSG00000111596.7	chr12	+	70687850	70688074			70671911	70672054	70704674	70704797	0.08500	0.00017	0.01296	included	K562	EFTUD2
SE	CNOT2	ENSG00000111596.7	chr12	+	70687850	70688074			70671911	70672054	70704674	70704797	0.06700	0.00162	0.05999	included	HepG2	MATR3
SE	CNOT2	ENSG00000111596.7	chr12	+	70687850	70688074			70671911	70672054	70704674	70704797	0.11700	0.00001	0.00255	included	HepG2	DDX6
SE	CNOT2	ENSG00000111596.7	chr12	+	70695484	70695645			70671911	70672054	70704674	70704797	0.06300	0.00004	0.01083	included	K562	HNRNPM
SE	CNOT2	ENSG00000111596.7	chr12	+	70713077	70713144			70704674	70704797	70729217	70729343	-0.05800	0.00057	0.07291	excluded	K562	HNRNPM
SE	CNOT2	ENSG00000111596.7	chr12	+	70723202	70723350			70713077	70713144	70729217	70729244	0.13600	0.00096	0.06171	included	K562	HNRNPL
SE	CNOT2	ENSG00000111596.7	chr12	+	70688016	70688074			70671911	70672054	70704674	70704797	-0.07200	0.00025	0.04064	excluded	HepG2	HNRNPUL1
SE	CNOT2	ENSG00000111596.7	chr12	+	70723202	70723350			70713077	70713144	70729217	70729244	-0.19500	0.00022	0.00912	excluded	HepG2	SF3A3
SE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797			70671911	70672054	70713077	70713144	-0.09700	0.00044	0.02424	excluded	HepG2	SF3B4
SE	CNOT2	ENSG00000111596.7	chr12	+	70726546	70726626			70724066	70724249	70729217	70729246	-0.10000	0.00000	0.00009	excluded	K562	UTP18
SE	CNOT2	ENSG00000111596.7	chr12	+	70736037	70736087			70735886	70735948	70737907	70738008	-0.15800	0.00003	0.00097	excluded	K562	U2AF2
SE	CNOT2	ENSG00000111596.7	chr12	+	70688016	70688074			70671911	70672054	70704674	70704797	0.05900	0.00274	0.08080	included	K562	TARDBP
SE	CNOT2	ENSG00000111596.7	chr12	+	70730508	70730754			70729218	70729343	70731168	70731293	0.05600	0.00065	0.02721	included	K562	HNRNPU
SE	CNOT2	ENSG00000111596.7	chr12	+	70726546	70726626			70724066	70724249	70729217	70729246	-0.06100	0.00025	0.00900	excluded	K562	RBM15
SE	CNOT2	ENSG00000111596.7	chr12	+	70723202	70723350			70713077	70713144	70729217	70729244	-0.36200	0.00000	0.00000	excluded	K562	AGGF1
SE	CNOT2	ENSG00000111596.7	chr12	+	70679179	70679366			70671911	70672054	70704674	70704797	0.27100	0.00000	0.00000	included	HepG2	HNRNPC
SE	CNOT2	ENSG00000111596.7	chr12	+	70726546	70726626			70713077	70713144	70729217	70729343	0.25000	0.00241	0.07754	included	K562	PTBP1
SE	CNOT2	ENSG00000111596.7	chr12	+	70730508	70730754			70729217	70729343	70731168	70731293	-0.06600	0.00004	0.00283	excluded	K562	PTBP1
SE	CNOT2	ENSG00000111596.7	chr12	+	70679179	70679366			70671911	70672054	70704674	70704797	0.57900	0.00000	0.00000	included	K562	HNRNPC
A3SS	CNOT2	ENSG00000111596.7	chr12	+	70729184	70729246			70729217	70729246	70726546	70726626	0.06900	0.00063	0.00460	longer	K562	AQR
A3SS	CNOT2	ENSG00000111596.7	chr12	+	70732423	70732602			70732445	70732602	70732222	70732343	0.05800	0.00000	0.00005	longer	K562	AQR
A3SS	CNOT2	ENSG00000111596.7	chr12	+	70735837	70735948			70735886	70735948	70732423	70732602	0.05800	0.00000	0.00000	longer	K562	AQR
A3SS	CNOT2	ENSG00000111596.7	chr12	+	70704658	70704797			70704674	70704797	70671911	70672054	0.11400	0.00000	0.00000	longer	K562	AQR
MXE	CNOT2	ENSG00000111596.7	chr12	+	70737907	70738008	70739959	70740104	70736037	70736087	70747608	70747693	0.21800	0.00091	0.01985	1included	HepG2	U2AF1
MXE	CNOT2	ENSG00000111596.7	chr12	+	70688016	70688074	70695484	70695645	70671911	70672054	70704674	70704797	0.33200	0.00512	0.07868	1included	HepG2	SRSF1
MXE	CNOT2	ENSG00000111596.7	chr12	+	70679179	70679366	70688016	70688074	70671911	70672054	70704674	70704797	-0.33200	0.00512	0.07868	2included	HepG2	SRSF1
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70723202	70723350	0.17700	0.00004	0.00251	1included	K562	RBM15
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70729217	70729343	-0.19500	0.00000	0.00001	2included	K562	RBM15
MXE	CNOT2	ENSG00000111596.7	chr12	+	70724066	70724249	70726546	70726626	70723202	70723350	70729217	70729343	0.14400	0.00780	0.07379	1included	K562	DROSHA
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70723202	70723350	0.30900	0.00000	0.00000	1included	K562	PUS1
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70729217	70729343	-0.24000	0.00000	0.00000	2included	K562	PUS1
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70729217	70729343	-0.22800	0.00000	0.00000	2included	K562	AGGF1
MXE	CNOT2	ENSG00000111596.7	chr12	+	70688016	70688074	70695484	70695645	70671911	70672054	70704674	70704797	0.71500	0.00496	0.06565	1included	K562	SRSF1
MXE	CNOT2	ENSG00000111596.7	chr12	+	70687850	70688074	70695484	70695645	70671911	70672054	70704674	70704797	0.63000	0.00106	0.01995	1included	K562	SRSF1
MXE	CNOT2	ENSG00000111596.7	chr12	+	70724032	70724249	70726546	70726626	70723202	70723350	70729217	70729343	0.14000	0.00001	0.00020	1included	K562	AQR
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704658	70704797	70729217	70729343	70671911	70672054	70731168	70731264	0.08900	0.00000	0.00000	1included	K562	AQR
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704658	70704797	70713077	70713144	70671911	70672054	70723202	70723350	0.24700	0.00000	0.00000	1included	K562	AQR
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704640	70704797	70713077	70713144	70671911	70672054	70723202	70723350	0.11600	0.00019	0.00208	1included	K562	AQR
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704577	70704797	70713077	70713144	70671911	70672054	70723202	70723350	0.08200	0.00210	0.01735	1included	K562	AQR
MXE	CNOT2	ENSG00000111596.7	chr12	+	70713077	70713144	70729217	70729413	70704674	70704797	70731168	70731293	-0.05600	0.00005	0.00065	2included	K562	AQR
MXE	CNOT2	ENSG00000111596.7	chr12	+	70713077	70713144	70729184	70729413	70704640	70704797	70731168	70731293	-0.06700	0.00000	0.00001	2included	K562	AQR
MXE	CNOT2	ENSG00000111596.7	chr12	+	70713077	70713144	70729184	70729343	70704577	70704797	70731168	70731293	-0.08900	0.01715	0.09724	2included	K562	AQR
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70729217	70729343	-0.17300	0.00021	0.00234	2included	K562	AQR
MXE	CNOT2	ENSG00000111596.7	chr12	+	70679179	70679366	70687850	70688074	70671911	70672054	70704674	70704797	-0.28600	0.01686	0.09603	2included	K562	AQR
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70723202	70723350	0.15800	0.00012	0.01211	1included	K562	UTP18
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70729217	70729343	-0.19200	0.00002	0.00331	2included	K562	UTP18
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70723202	70723350	-0.18100	0.00269	0.08294	2included	HepG2	BCCIP
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70729217	70729343	-0.13600	0.00008	0.00545	2included	HepG2	SF3A3
MXE	CNOT2	ENSG00000111596.7	chr12	+	70687850	70688074	70695484	70695645	70671911	70672054	70704674	70704797	0.52500	0.00568	0.09401	1included	K562	TARDBP
MXE	CNOT2	ENSG00000111596.7	chr12	+	70726546	70726626	70729217	70729343	70724066	70724249	70731168	70731293	-0.13700	0.00422	0.07822	2included	K562	TARDBP
MXE	CNOT2	ENSG00000111596.7	chr12	+	70688016	70688074	70695484	70695645	70671911	70672054	70704674	70704797	0.49200	0.00128	0.03933	1included	K562	EFTUD2
MXE	CNOT2	ENSG00000111596.7	chr12	+	70687850	70688074	70695484	70695645	70671911	70672054	70704674	70704797	0.63300	0.00035	0.01479	1included	K562	EFTUD2
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70723202	70723350	-0.14600	0.01471	0.07370	2included	HepG2	U2AF2
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70729217	70729343	-0.26200	0.00221	0.07966	2included	HepG2	DROSHA
MXE	CNOT2	ENSG00000111596.7	chr12	+	70724066	70724249	70726546	70726626	70723202	70723350	70729217	70729343	0.17900	0.00000	0.00004	1included	HepG2	HNRNPUL1
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70723202	70723350	-0.19600	0.00324	0.07950	2included	HepG2	HNRNPC
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70723202	70723350	-0.17100	0.00053	0.06693	2included	K562	TBRG4
MXE	CNOT2	ENSG00000111596.7	chr12	+	70679179	70679366	70688016	70688074	70671911	70672054	70704674	70704797	0.43200	0.00610	0.08081	1included	K562	HNRNPC
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70729217	70729343	-0.25400	0.00363	0.05481	2included	K562	HNRNPC
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70723202	70723350	-0.42400	0.00000	0.00000	2included	K562	HNRNPC
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70723202	70723350	0.20100	0.00016	0.00954	1included	K562	HNRNPU
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70723202	70723350	-0.11900	0.00146	0.03901	2included	K562	PPIL4
MXE	CNOT2	ENSG00000111596.7	chr12	+	70671911	70672054	70704674	70704797	70637228	70637260	70713077	70713131	-0.13000	0.00011	0.00714	2included	K562	DDX55
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70729217	70729343	-0.19600	0.00003	0.00106	2included	K562	SF3B4
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70723202	70723350	0.13000	0.00226	0.07453	1included	K562	AKAP8L
MXE	CNOT2	ENSG00000111596.7	chr12	+	70704674	70704797	70713077	70713144	70671911	70672054	70729217	70729343	-0.15300	0.00002	0.00232	2included	K562	AKAP8L

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CNOT2

General Information

Functions

Localization

Domains (AlphaFold: CNOT2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CNOT2 is not avaliable on ENCORE database.

36 proteins are bound to CNOT2 RNA:

eCLIP assay for CNOT2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CNOT2 is not available on ENCORE database.

41 RBPs can affect the gene expression of CNOT2 :

The Knockdown/knockout RNA-Seq assay for CNOT2 is not available on ENCORE database.

28 RBPs can affect the splicing of CNOT2 :

The Knockdown/knockout RNA-Seq assay for CNOT2 is not avaliable on ENCORE database.