CHST11

General Information

Gene Name : CHST11
Gene ID : ENSG00000171310.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CHST11)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CHST11	ENSG00000171310.10	7.86	9.13	8.50	ENCSR000AEF
HepG2	CHST11	ENSG00000171310.10	0.00	0.00	0.00	ENCSR985KAT
K562	CHST11	ENSG00000171310.10	11.88	12.74	12.31	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CHST11 is not avaliable on ENCORE database.

Proteins bound to RNA

CHST11 RNA is bound by 27 proteins.

eCLIP assay for CHST11 is not avaliable on ENCORE database.

27 proteins are bound to CHST11 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	105152536	105152596	+	3'-UTR	3.09573	3.55461	K562	UPF1
chr12	105152549	105152592	+	3'-UTR	4.45157	6.86851	K562	FAM120A
chr12	105155271	105155360	+	3'-UTR	3.24622	3.51990	K562	AGGF1
chr12	105152760	105152856	+	3'-UTR	3.17508	3.29348	K562	YBX3
chr12	105152696	105152746	+	3'-UTR	4.11102	6.42251	K562	FAM120A
chr12	105155207	105155312	+	3'-UTR	3.00889	3.71976	K562	HNRNPL
chr12	104850720	104850828	+	5'-UTR	4.57295	6.71767	K562	DDX3X
chr12	104850782	104850853	+	5'-UTR	3.27921	6.67170	K562	ZNF622
chr12	104850781	104850826	+	5'-UTR	3.18267	4.08412	K562	RBM15
chr12	104851130	104851188	+	5'-UTR	3.68766	7.39702	K562	RBM15
chr12	105150922	105151007	+	CDS	5.37556	11.50033	K562	LIN28B
chr12	105150833	105150892	+	CDS	4.59339	4.24959	K562	SND1
chr12	104851246	104851297	+	CDS,intron-Proximal	4.49125	5.40333	K562	RBM15
chr12	105151249	105151310	+	CDS	3.29281	4.29172	K562	YBX3
chr12	104851217	104851269	+	CDS	4.56613	5.24929	K562	ZNF622
chr12	105151139	105151189	+	CDS	4.21045	3.60906	K562	SND1
chr12	105151118	105151126	+	CDS	4.71624	6.03393	K562	YBX3
chr12	105151167	105151214	+	CDS	4.56138	5.82137	K562	YBX3
chr12	105151126	105151163	+	CDS	5.15878	8.41567	K562	YBX3
chr12	105151115	105151185	+	CDS	3.78848	5.28224	K562	METAP2
chr12	105064531	105064781	+	intron-Distal	4.99523	24.98750	K562	AKAP8L
chr12	105003848	105003913	+	intron-Distal	4.93697	8.14280	K562	TARDBP
chr12	105064157	105064213	+	intron-Distal	6.94246	76.24599	K562	AGGF1
chr12	105093392	105093460	+	intron-Distal	4.03389	3.87294	K562	TARDBP
chr12	105018071	105018146	+	intron-Distal	3.62999	3.01412	K562	SAFB2
chr12	105064531	105064562	+	intron-Distal	6.32774	46.91840	K562	AGGF1
chr12	104851900	104851956	+	intron-Distal	4.26070	3.30664	K562	NONO
chr12	104881942	104881998	+	intron-Distal	4.12483	12.30459	K562	EIF4G2
chr12	105064128	105064218	+	intron-Distal	4.49379	17.75973	K562	HNRNPL
chr12	105065525	105065584	+	intron-Distal	5.26157	7.41017	K562	PTBP1
chr12	105064762	105064827	+	intron-Distal	6.09699	21.54456	K562	HNRNPL
chr12	104980547	104980667	+	intron-Distal	3.34516	3.90146	K562	KHSRP
chr12	105065533	105065562	+	intron-Distal	3.55327	12.66543	K562	AGGF1
chr12	105064640	105064662	+	intron-Distal	6.37873	59.01125	K562	AGGF1
chr12	104882224	104882381	+	intron-Distal	4.39852	14.09802	K562	TARDBP
chr12	104851354	104851397	+	intron-Distal,intron-Proximal	5.22766	6.21813	K562	TIA1
chr12	105064562	105064579	+	intron-Distal	6.21377	48.30814	K562	AGGF1
chr12	105063212	105063255	+	intron-Distal	5.45091	16.39973	K562	AGGF1
chr12	105064270	105064346	+	intron-Distal	4.70892	8.27393	K562	AKAP8L
chr12	104851370	104851418	+	intron-Distal,intron-Proximal	4.45483	4.93465	K562	RBM15
chr12	104852268	104852339	+	intron-Distal	3.80415	7.68379	K562	NONO
chr12	104866130	104866237	+	intron-Distal	3.25574	3.62826	K562	HNRNPL
chr12	105064898	105064984	+	intron-Distal	4.16129	4.72754	K562	YBX3
chr12	105078069	105078164	+	intron-Distal	5.77079	16.29438	K562	EIF4G2
chr12	104925354	104925418	+	intron-Distal	3.94411	3.06015	K562	MATR3
chr12	105101708	105101870	+	intron-Distal	3.99979	20.26299	K562	AGGF1
chr12	105041561	105041635	+	intron-Distal	4.23916	3.76710	K562	NONO
chr12	105064707	105064747	+	intron-Distal	8.39430	174.15565	K562	AGGF1
chr12	105101587	105101669	+	intron-Distal	4.02556	11.79648	K562	AGGF1
chr12	104851653	104851728	+	intron-Distal	3.13846	6.67348	K562	NONO
chr12	104882131	104882224	+	intron-Distal	5.69006	13.42901	K562	TARDBP
chr12	105065765	105065834	+	intron-Distal	3.06719	3.38183	K562	NONO
chr12	104879818	104879903	+	intron-Distal	4.45028	15.79776	K562	EIF4G2
chr12	105038112	105038219	+	intron-Distal	4.07199	3.98115	K562	MATR3
chr12	105064706	105064762	+	intron-Distal	6.62722	28.28888	K562	HNRNPL
chr12	105002371	105002436	+	intron-Distal	4.45359	7.56720	K562	PTBP1
chr12	104882522	104882607	+	intron-Distal	5.62786	13.16698	K562	TARDBP
chr12	105064764	105064885	+	intron-Distal	7.61749	175.46606	K562	AGGF1
chr12	105008408	105008464	+	intron-Distal	4.55332	5.79092	K562	TARDBP
chr12	105003841	105003903	+	intron-Distal	4.64825	3.26170	K562	EIF4G2
chr12	105065044	105065097	+	intron-Distal	3.34913	3.57593	K562	GTF2F1
chr12	105064747	105064764	+	intron-Distal	8.32410	156.06875	K562	AGGF1
chr12	105101796	105101829	+	intron-Distal	5.74347	13.94923	K562	HNRNPL
chr12	105064635	105064800	+	intron-Distal	4.61306	13.78115	K562	YBX3
chr12	104994811	104994922	+	intron-Distal	5.50557	7.91717	K562	PTBP1
chr12	105063804	105063874	+	intron-Distal	3.78981	5.67615	K562	GTF2F1
chr12	105008417	105008574	+	intron-Distal	4.18344	5.34995	K562	EIF4G2
chr12	105022504	105022587	+	intron-Distal	3.92828	4.69074	K562	PTBP1
chr12	105064652	105064706	+	intron-Distal	5.61362	12.76916	K562	HNRNPL
chr12	105044351	105044443	+	intron-Distal	5.04915	6.43928	K562	GTF2F1
chr12	104884828	104885008	+	intron-Distal	4.27917	4.94713	K562	HNRNPL
chr12	104875569	104875623	+	intron-Distal	3.71309	4.22415	K562	PTBP1
chr12	104882603	104882678	+	intron-Distal	4.57225	14.00422	K562	EIF4G2
chr12	105035072	105035202	+	intron-Distal	5.26590	12.22503	K562	LSM11
chr12	105063809	105063856	+	intron-Distal	4.53702	5.18391	K562	HNRNPL
chr12	104906930	104907018	+	intron-Distal	4.96137	8.62201	K562	GTF2F1
chr12	104851487	104851533	+	intron-Distal	4.27123	3.99137	K562	NONO
chr12	104961897	104961994	+	intron-Distal	4.22896	3.78162	K562	HNRNPM
chr12	105101525	105101594	+	intron-Distal	4.61115	4.36078	K562	GTF2F1
chr12	105101504	105101549	+	intron-Distal	3.62306	6.00711	K562	HNRNPL
chr12	104874474	104874624	+	intron-Distal	3.88080	3.84295	K562	GRWD1
chr12	104882466	104882522	+	intron-Distal	4.75084	5.54597	K562	TARDBP
chr12	104852268	104852333	+	intron-Distal	3.65835	5.02933	K562	CSTF2T
chr12	105032082	105032167	+	intron-Distal	5.48367	12.19892	K562	TARDBP
chr12	105064681	105064822	+	intron-Distal	6.61326	16.88545	K562	GTF2F1
chr12	105064457	105064527	+	intron-Distal	3.64455	5.25938	K562	AKAP8L
chr12	104912332	104912422	+	intron-Distal	4.00945	3.98553	K562	NONO
chr12	105062960	105063056	+	intron-Distal	3.89133	3.34601	K562	HNRNPK
chr12	105018232	105018349	+	intron-Distal	5.42725	10.75912	K562	TARDBP
chr12	105063649	105063694	+	intron-Distal	3.16387	3.84589	K562	HNRNPL
chr12	105101602	105101668	+	intron-Distal	5.75369	14.67539	K562	HNRNPL
chr12	105063204	105063244	+	intron-Distal	4.22271	4.70117	K562	HNRNPL
chr12	104925367	104925431	+	intron-Distal	3.68556	4.32448	K562	PTBP1
chr12	104879780	104879873	+	intron-Distal	3.10837	6.09544	K562	TARDBP
chr12	105064579	105064640	+	intron-Distal	7.95760	106.06561	K562	AGGF1
chr12	105064929	105064980	+	intron-Distal	4.37058	15.25563	K562	HNRNPL
chr12	105070676	105070747	+	intron-Distal	3.85975	3.33944	K562	MATR3
chr12	105064361	105064410	+	intron-Distal	7.54055	86.76677	K562	AGGF1
chr12	104882024	104882078	+	intron-Distal	5.69621	8.53131	K562	EIF4G2
chr12	104864975	104865070	+	intron-Distal	3.09385	3.42428	K562	HNRNPL
chr12	105064935	105064976	+	intron-Distal	5.81567	52.08494	K562	AGGF1
chr12	105064287	105064361	+	intron-Distal	5.93503	84.27683	K562	AGGF1
chr12	104862538	104862597	+	intron-Distal	4.72272	7.00934	K562	TARDBP
chr12	104883615	104883693	+	intron-Distal	3.93013	7.64378	K562	EIF4G2
chr12	104851599	104851653	+	intron-Distal	3.11720	5.17701	K562	NONO
chr12	105101717	105101796	+	intron-Distal	5.00112	15.51948	K562	HNRNPL
chr12	104912850	104912940	+	intron-Distal	5.36204	9.71026	K562	TARDBP
chr12	104918378	104918494	+	intron-Distal	4.76357	4.07596	K562	GTF2F1
chr12	105065047	105065093	+	intron-Distal	5.02510	9.43003	K562	HNRNPL
chr12	104868559	104868650	+	intron-Distal	3.80193	3.30664	K562	NONO
chr12	105064147	105064214	+	intron-Distal	5.06742	5.63094	K562	GTF2F1
chr12	104918267	104918502	+	intron-Distal	3.59451	5.57675	K562	HNRNPL
chr12	105101829	105101869	+	intron-Distal	4.56754	5.63065	K562	HNRNPL
chr12	105064901	105064929	+	intron-Distal	3.17815	5.86764	K562	HNRNPL
chr12	104882492	104882590	+	intron-Distal	7.11730	21.42306	K562	EIF4G2
chr12	105040011	105040101	+	intron-Distal	3.20142	5.64780	K562	PTBP1
chr12	104851356	104851456	+	intron-Distal,intron-Proximal	3.77817	9.06112	K562	NONO
chr12	104880331	104880415	+	intron-Distal	4.26527	13.02301	K562	TARDBP
chr12	104880356	104880432	+	intron-Distal	4.79586	12.48259	K562	EIF4G2
chr12	105065702	105065759	+	intron-Distal	3.97245	3.82910	K562	NONO
chr12	105101594	105101668	+	intron-Distal	5.21289	7.33617	K562	GTF2F1
chr12	105008464	105008529	+	intron-Distal	4.97457	7.44287	K562	TARDBP
chr12	104882157	104882207	+	intron-Distal	6.06722	10.00047	K562	EIF4G2
chr12	104918380	104918474	+	intron-Distal	4.58243	12.76474	K562	AGGF1
chr12	104882148	104882251	+	intron-Distal	4.08221	3.31904	K562	IGF2BP1
chr12	104881069	104881108	+	intron-Distal	3.97592	5.34995	K562	EIF4G2
chr12	104880504	104880549	+	intron-Distal	5.15498	7.26071	K562	EIF4G2
chr12	104880117	104880186	+	intron-Distal	3.71700	13.09421	K562	EIF4G2
chr12	105089234	105089304	+	intron-Distal	4.95836	6.23114	K562	TARDBP
chr12	105101549	105101602	+	intron-Distal	3.60844	9.24162	K562	HNRNPL
chr12	104882448	104882492	+	intron-Distal	4.65498	7.66106	K562	EIF4G2
chr12	105064662	105064707	+	intron-Distal	7.32643	108.10257	K562	AGGF1
chr12	105064917	105064989	+	intron-Distal	3.39509	5.43751	K562	GTF2F1
chr12	104881224	104881281	+	intron-Distal	5.30196	8.04355	K562	EIF4G2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for CHST11 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CHST11 is not available on ENCORE database.
31 RBPs can affect the levels of CHST11.

The Knockdown/knockout RNA-Seq assay for CHST11 is not available on ENCORE database.

31 RBPs can affect the gene expression of CHST11 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CHST11	ENSG00000171310.6	13.90520	0.00000	99999.99990	3.28190	2.70930	HepG2	AKAP1
CHST11	ENSG00000171310.6	11.88000	0.54410	4.44850	2.90040	2.22330	HepG2	CKAP4
CHST11	ENSG00000171310.6	32.57380	0.00000	99999.99990	9.52170	7.47540	HepG2	GRSF1
CHST11	ENSG00000171310.6	16.97070	1.42640	3.57250	4.16860	3.35420	HepG2	HNRNPL
CHST11	ENSG00000171310.6	0.00000	7.75890	-99999.99999	1.98170	1.44040	HepG2	HNRNPLL
CHST11	ENSG00000171310.6	37.74120	2.57290	3.87460	7.86150	7.09170	HepG2	RBM22
CHST11	ENSG00000171310.6	0.00000	7.67970	-99999.99999	1.99370	1.38950	HepG2	SF3B1
CHST11	ENSG00000171310.6	1284.64360	1556.37440	-0.27680	3.09260	2.49780	K562	AGGF1
CHST11	ENSG00000171310.6	1173.00800	1619.46600	-0.46530	4.85600	3.98180	K562	AKAP8L
CHST11	ENSG00000171310.6	808.90080	1150.66490	-0.50840	4.64140	3.91650	K562	AQR
CHST11	ENSG00000171310.6	1175.02940	1699.18660	-0.53210	8.54670	6.81600	K562	ATP5C1
CHST11	ENSG00000171310.6	2220.82080	1897.51890	0.22690	2.43740	1.52390	K562	CELF1
CHST11	ENSG00000171310.6	430.35290	610.66800	-0.50490	5.14780	3.33190	K562	DDX27
CHST11	ENSG00000171310.6	1722.27830	1384.19380	0.31520	3.99990	3.23540	K562	DDX47
CHST11	ENSG00000171310.6	1476.55780	1052.96800	0.48770	7.41740	6.32260	K562	EIF2S2
CHST11	ENSG00000171310.6	831.68400	561.32870	0.56710	2.67130	1.68700	K562	EIF3A
CHST11	ENSG00000171310.6	1047.89580	739.54710	0.50270	3.70100	2.48860	K562	EIF3D
CHST11	ENSG00000171310.6	644.97410	471.04650	0.45330	3.77210	2.85320	K562	EIF3G
CHST11	ENSG00000171310.6	781.75730	598.63750	0.38490	3.50800	2.83870	K562	FXR1
CHST11	ENSG00000171310.6	1176.83050	870.20360	0.43540	3.87960	2.94630	K562	GPKOW
CHST11	ENSG00000171310.6	1340.73900	1718.70080	-0.35830	3.15340	2.26870	K562	KIF1C
CHST11	ENSG00000171310.6	962.93100	704.24510	0.45130	4.14750	3.11340	K562	MAGOH
CHST11	ENSG00000171310.6	806.66350	1079.95170	-0.42090	5.32590	4.22880	K562	MTPAP
CHST11	ENSG00000171310.6	2108.00150	1214.69930	0.79520	10.28250	8.68510	K562	PCBP3
CHST11	ENSG00000171310.6	1606.30150	931.67430	0.78570	14.54770	12.77500	K562	POLR2G
CHST11	ENSG00000171310.6	868.48570	1606.15310	-0.88700	12.97510	11.84560	K562	PUS1
CHST11	ENSG00000171310.6	501.92520	656.05540	-0.38630	2.05510	1.33550	K562	RBM22
CHST11	ENSG00000171310.6	1208.45950	830.27450	0.54140	4.08970	2.76330	K562	SAFB
CHST11	ENSG00000171310.6	865.36690	654.00640	0.40390	3.06140	1.94000	K562	SRSF4
CHST11	ENSG00000171310.6	1208.35880	934.55090	0.37060	2.82860	1.99910	K562	SYNCRIP
CHST11	ENSG00000171310.6	376.45810	503.65780	-0.42000	2.91210	2.08830	K562	U2AF2
CHST11	ENSG00000171310.6	1058.85070	1272.31570	-0.26500	2.83230	2.10510	K562	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CHST11 is not available on ENCORE database.

3 RBPs can affect the splicing of CHST11 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CHST11	ENSG00000171310.6	chr12	+	104995683	104995769	104850748	104851292	105150726	105155792	-0.08700	0.00557	0.05074	excluded	K562	AQR
SE	CHST11	ENSG00000171310.6	chr12	+	104995683	104995769	104850748	104851292	105150726	105155792	-0.10200	0.00081	0.02918	excluded	K562	UTP18
SE	CHST11	ENSG00000171310.6	chr12	+	104995683	104995769	104850748	104851292	105150726	105155792	-0.14700	0.00093	0.03773	excluded	K562	SF3B1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CHST11

General Information

Functions

Localization

Domains (AlphaFold: CHST11)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CHST11 is not avaliable on ENCORE database.

27 proteins are bound to CHST11 RNA:

eCLIP assay for CHST11 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CHST11 is not available on ENCORE database.

31 RBPs can affect the gene expression of CHST11 :

The Knockdown/knockout RNA-Seq assay for CHST11 is not available on ENCORE database.

3 RBPs can affect the splicing of CHST11 :

The Knockdown/knockout RNA-Seq assay for CHST11 is not avaliable on ENCORE database.