CENPM

General Information

Gene Name       : CENPM
Gene ID             : ENSG00000100162.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: CENPM)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CENPMENSG00000100162.146.1626.5016.33ENCSR000AEF
HepG2CENPMENSG00000100162.1435.729.5922.66ENCSR985KAT
K562CENPMENSG00000100162.1429.8615.8822.87ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CENPM is not avaliable on ENCORE database.



Proteins bound to RNA
  • CENPM RNA is bound by 17 proteins.  







eCLIP assay for CENPM is not avaliable on ENCORE database.





17 proteins are bound to CENPM RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr224233493342335077-3'-UTR,CDS,intron-Distal,intron-Proximal3.161153.80024HepG2LARP4
chr224233509642335153-3'-UTR,CDS,intron-Distal,intron-Proximal4.027305.07081HepG2XPO5
chr224233501042335064-3'-UTR,CDS,intron-Distal3.390687.43903HepG2XPO5
chr224233957542339640-5'-UTR,CDS,intron-Distal,intron-Proximal3.799015.24055HepG2PRPF8
chr224234265742342756-5'-UTR,intron-Distal,intron-Proximal5.161296.92972HepG2NCBP2
chr224234266142342735-5'-UTR,intron-Distal,intron-Proximal4.070803.04254K562UCHL5
chr224234302442343136-5'-UTR,CDS,intron-Distal6.133798.43873K562DDX3X
chr224234191642341937-CDS,intron-Distal,intron-Proximal4.398694.38106HepG2PPIG
chr224234196942342022-CDS,intron-Distal,intron-Proximal6.2739916.54010K562AQR
chr224234196442342033-CDS,intron-Distal,intron-Proximal4.659955.25202HepG2AQR
chr224233965742339706-CDS,intron-Distal,intron-Proximal3.477077.40344HepG2PPIG
chr224234196242342021-CDS,intron-Distal,intron-Proximal3.407393.39477K562BUD13
chr224234237942342423-CDS,intron-Distal,intron-Proximal3.985995.59977HepG2AQR
chr224234234342342424-CDS,intron-Distal,intron-Proximal3.799476.70109K562PRPF8
chr224234120342341306-CDS,intron-Distal,intron-Proximal4.8846425.67561HepG2PPIG
chr224234238342342421-intron-Distal,intron-Proximal5.4352632.37320K562AQR
chr224233597842336068-intron-Distal4.363385.52578K562U2AF2
chr224234187442341888-intron-Distal,intron-Proximal5.467667.81430K562AQR
chr224233902942339073-intron-Distal4.246995.63677K562PTBP1
chr224233561942335677-intron-Distal4.444763.00079K562DHX30
chr224233526042335299-intron-Distal3.824463.77743K562DDX52
chr224233600342336087-intron-Distal6.7767524.03633HepG2PTBP1
chr224233686442336931-intron-Distal3.901095.29679HepG2PTBP1
chr224234189342341914-intron-Distal,intron-Proximal5.416117.81430K562AQR
chr224233550042335536-intron-Distal4.4167411.20756K562PTBP1
chr224233576442335786-intron-Distal6.5718639.27622K562PTBP1
chr224233551642335597-intron-Distal5.3232519.40669HepG2PTBP1
chr224233553642335602-intron-Distal5.3608132.73654K562PTBP1
chr224233529342335343-intron-Distal4.427158.79903HepG2PTBP1
chr224233560242335668-intron-Distal5.8379143.46347K562PTBP1
chr224233555842335597-intron-Distal5.078363.80483K562DDX52
chr224233920242339274-intron-Distal4.333343.53723HepG2PTBP1
chr224233572242335784-intron-Distal4.917457.60031K562U2AF2
chr224234240342342420-intron-Distal,intron-Proximal5.313074.35676HepG2PRPF8
chr224233598942336079-intron-Distal3.469933.84767HepG2POLR2G
chr224233572542335785-intron-Distal6.0520415.27759HepG2PTBP1
chr224233572942335764-intron-Distal6.6694842.40230K562PTBP1
chr224233599742336069-intron-Distal4.778778.39063K562DHX30
chr224233559142335660-intron-Distal3.979003.06676K562U2AF2
chr224233922842339272-intron-Distal3.559375.44125K562PTBP1
chr224233527042335339-intron-Distal3.169653.30533HepG2POLR2G
chr224233600742336077-intron-Distal5.086248.56550K562DDX52
chr224234202242342032-intron-Distal,intron-Proximal5.300457.81430K562AQR
chr224233566842335706-intron-Distal5.0683312.11137K562PTBP1
chr224234237342342403-intron-Distal,intron-Proximal5.515195.68502HepG2PRPF8
chr224233626542336327-intron-Distal,intron-Proximal4.9711612.38260HepG2PTBP1
chr224233627342336325-intron-Distal,intron-Proximal4.0116018.19334K562PTBP1
chr224233560542335662-intron-Distal3.396513.35087HepG2POLR2G
chr224233742542337475-intron-Distal4.688684.90578HepG2HNRNPM
chr224234237842342383-intron-Distal,intron-Proximal6.3230030.75010K562AQR
chr224233599842336070-intron-Distal5.8807928.74200K562PTBP1
chr224233559742335662-intron-Distal6.2532321.04822HepG2PTBP1
chr224233686242336982-intron-Distal3.970584.37227K562FUS
chr224233596542336088-intron-Distal4.428657.76905K562GTF2F1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CENPM is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CENPM is not available on ENCORE database.

  • 69 RBPs can affect the levels of CENPM.  








The Knockdown/knockout RNA-Seq assay for CENPM is not available on ENCORE database.





69 RBPs can affect the gene expression of CENPM :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CENPMENSG00000100162.1029.9000067.92330-1.183802.838901.75560HepG2AATF
CENPMENSG00000100162.1041.7324098.38740-1.237303.570802.97680HepG2AKAP1
CENPMENSG00000100162.1033.3727081.40640-1.286503.681302.77870HepG2ASCC1
CENPMENSG00000100162.1095.50280232.08630-1.2810010.206809.02580HepG2AUH
CENPMENSG00000100162.106.4530060.60650-3.231403.923503.22360HepG2BOP1
CENPMENSG00000100162.1019.2071075.32110-1.971405.590304.54300HepG2CALR
CENPMENSG00000100162.1023.5990077.34200-1.712505.181504.14120HepG2CIRBP
CENPMENSG00000100162.1032.91650127.89720-1.9581012.3100011.10990HepG2CKAP4
CENPMENSG00000100162.1077.24260118.49050-0.617301.885701.33660HepG2CELF1
CENPMENSG00000100162.1031.5346074.81600-1.246403.505202.74970HepG2DDX21
CENPMENSG00000100162.1025.5129073.31600-1.522904.498603.32330HepG2DDX24
CENPMENSG00000100162.1020.2600094.24580-2.217808.891107.82320HepG2DDX3X
CENPMENSG00000100162.1057.74340105.53200-0.870002.404701.67820HepG2DDX55
CENPMENSG00000100162.108.5613063.17750-2.883503.430402.34430HepG2DDX59
CENPMENSG00000100162.1023.8903080.96350-1.760805.244204.41920HepG2DDX6
CENPMENSG00000100162.1017.9669068.98140-1.940905.901504.29380HepG2AGO1
CENPMENSG00000100162.1012.4145077.82780-2.648309.016907.98400HepG2EIF2S1
CENPMENSG00000100162.1037.35430125.69280-1.750609.050707.70290HepG2EIF4G1
CENPMENSG00000100162.1099.95720266.47360-1.4146013.6141012.44510HepG2ETF1
CENPMENSG00000100162.10196.5153086.783601.179006.359905.33450HepG2FXR1
CENPMENSG00000100162.1017.6000063.04440-1.840802.307801.71990HepG2GPKOW
CENPMENSG00000100162.1051.51490117.08500-1.184504.875803.69060HepG2HNRNPA2B1
CENPMENSG00000100162.1019.0981060.16620-1.655501.954701.41740HepG2HNRNPLL
CENPMENSG00000100162.1023.4591081.82650-1.802406.040805.08060HepG2IGF2BP2
CENPMENSG00000100162.10201.1207086.813901.212006.765605.75380HepG2MAGOH
CENPMENSG00000100162.10190.01280126.324900.588902.678701.92770HepG2NOL12
CENPMENSG00000100162.1015.1021053.36320-1.821102.096501.44120HepG2NSUN2
CENPMENSG00000100162.1020.3593079.57190-1.966606.820305.69480HepG2PABPC4
CENPMENSG00000100162.1070.54750109.94400-0.640102.045501.37290HepG2PRPF4
CENPMENSG00000100162.1014.2609081.38690-2.512709.018407.65040HepG2PRPF8
CENPMENSG00000100162.1058.15970106.54090-0.873302.608101.99830HepG2QKI
CENPMENSG00000100162.1034.23820106.86670-1.642107.481706.16510HepG2RBM15
CENPMENSG00000100162.1051.28220222.72100-2.1187018.8368017.73120HepG2RBM22
CENPMENSG00000100162.1034.7990096.70420-1.474505.351704.44210HepG2RBM25
CENPMENSG00000100162.10160.55600109.499600.552101.999301.52330HepG2NELFE
CENPMENSG00000100162.1013.77410112.01290-3.0236015.7201014.34930HepG2RPLP0
CENPMENSG00000100162.106.9003080.50620-3.5444012.8197011.33060HepG2RRP9
CENPMENSG00000100162.1016.6714066.25420-1.990602.505601.76330HepG2SNRNP70
CENPMENSG00000100162.1030.98240251.55250-3.0213035.5194034.25560HepG2SRFBP1
CENPMENSG00000100162.1043.99260102.16260-1.215504.672703.80370HepG2SRSF7
CENPMENSG00000100162.1019.6183086.99250-2.148709.147908.24780HepG2SRSF9
CENPMENSG00000100162.10148.65890218.40230-0.555002.769902.25700HepG2SSB
CENPMENSG00000100162.1016.81450105.04900-2.6433011.4684010.24960HepG2SUPV3L1
CENPMENSG00000100162.1039.4875096.13100-1.283604.471303.78450HepG2TAF15
CENPMENSG00000100162.1022.0669070.40660-1.673804.513403.28610HepG2TFIP11
CENPMENSG00000100162.1019.4077084.20280-2.117208.754607.95470HepG2TIAL1
CENPMENSG00000100162.1021.53330102.58020-2.252109.672308.48410HepG2U2AF1
CENPMENSG00000100162.1030.8474089.00700-1.528805.961104.99810HepG2UPF1
CENPMENSG00000100162.1051.0602091.48120-0.841302.515801.51050HepG2UTP18
CENPMENSG00000100162.10183.21740103.409400.825102.924902.17900HepG2XRN2
CENPMENSG00000100162.1063.37450108.50290-0.775802.671702.01100HepG2ZC3H8
CENPMENSG00000100162.107.7495097.88960-3.6590019.7114018.58000HepG2ZNF622
CENPMENSG00000100162.10184.76940314.58130-0.767704.581703.86100K562AQR
CENPMENSG00000100162.10246.01160161.607600.606103.124102.10820K562BCLAF1
CENPMENSG00000100162.10152.18400214.97200-0.498302.138701.37990K562DKC1
CENPMENSG00000100162.10113.4550060.583000.905003.244602.38610K562EIF3G
CENPMENSG00000100162.10177.4118098.781200.844704.016402.98240K562FIP1L1
CENPMENSG00000100162.1055.14830132.24500-1.261805.417203.74310K562FKBP4
CENPMENSG00000100162.10224.18370144.128000.637203.150702.51110K562FXR1
CENPMENSG00000100162.1012.2089039.13450-1.680503.009302.26690K562G3BP2
CENPMENSG00000100162.10256.33410133.904900.936705.661004.53750K562HSPD1
CENPMENSG00000100162.10145.6597088.594600.717202.961602.09160K562MAGOH
CENPMENSG00000100162.10154.1311088.410900.801803.636502.56550K562MATR3
CENPMENSG00000100162.1084.21360166.47910-0.983203.589702.55270K562NAA15
CENPMENSG00000100162.10243.72020112.158401.119608.018106.45650K562PPIG
CENPMENSG00000100162.10196.5593086.077101.191208.247007.14140K562PTBP1
CENPMENSG00000100162.10293.74810397.58660-0.436702.726201.66840K562PUM1
CENPMENSG00000100162.10194.92260111.966200.799702.743301.42160K562RRP9
CENPMENSG00000100162.10260.88860173.502400.588402.866201.76370K562SAFB
CENPMENSG00000100162.10190.47490118.046400.690102.844901.80210K562SRFBP1
CENPMENSG00000100162.10144.4869084.387200.775702.993102.26050K562SRSF1
CENPMENSG00000100162.10134.4646079.704600.754402.842501.77680K562SRSF5
CENPMENSG00000100162.1017.2181039.21000-1.187302.053001.36190K562U2AF2
CENPMENSG00000100162.10204.26720114.343000.837002.555801.40880K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CENPM is not available on ENCORE database.





1 RBPs can affect the splicing of CENPM :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSCENPMENSG00000100162.10chr22-4234122842341353423412284234130842341916423420780.147000.000000.00004longerK562AQR
A3SSCENPMENSG00000100162.10chr22-4233961342339852423396134233970542341228423413930.063000.000080.00072longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CENPM is not avaliable on ENCORE database.