CDHR5

General Information

Gene Name       : CDHR5
Gene ID             : ENSG00000099834.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CDHR5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CDHR5ENSG00000099834.180.000.000.00ENCSR000AEF
HepG2CDHR5ENSG00000099834.180.680.510.59ENCSR985KAT
K562CDHR5ENSG00000099834.180.010.000.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CDHR5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CDHR5 RNA is bound by 7 proteins.  







eCLIP assay for CDHR5 is not avaliable on ENCORE database.





7 proteins are bound to CDHR5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11618885618908-3'-UTR,CDS,intron-Distal4.923908.39621K562DDX3X
chr11618885618893-3'-UTR,CDS,intron-Distal7.5393938.49114K562NSUN2
chr11618890618905-3'-UTR,CDS,intron-Distal3.211084.09433HepG2DHX30
chr11618886618890-3'-UTR,CDS,intron-Distal3.211084.09433HepG2DHX30
chr11618890618908-3'-UTR,CDS,intron-Distal4.629738.86385K562NPM1
chr11618890618908-3'-UTR,CDS,intron-Distal4.677054.91669K562TROVE2
chr11618885618894-3'-UTR,CDS,intron-Distal6.7219141.12338K562WRN
chr11618894618908-3'-UTR,CDS,intron-Distal6.7219141.12338K562WRN
chr11618886618890-3'-UTR,CDS,intron-Distal4.629738.86385K562NPM1
chr11618885618907-3'-UTR,CDS,intron-Distal4.411835.09344HepG2XPO5
chr11618893618908-3'-UTR,CDS,intron-Distal7.5393938.49114K562NSUN2
chr11618886618890-3'-UTR,CDS,intron-Distal4.677054.91669K562TROVE2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CDHR5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CDHR5 is not available on ENCORE database.

  • 67 RBPs can affect the levels of CDHR5.  








The Knockdown/knockout RNA-Seq assay for CDHR5 is not available on ENCORE database.





67 RBPs can affect the gene expression of CDHR5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CDHR5ENSG00000099834.14138.0976029.196302.241709.429207.84850HepG2ABCF1
CDHR5ENSG00000099834.143.6938028.33580-2.939503.919403.30290HepG2AKAP1
CDHR5ENSG00000099834.1474.8955010.565502.825409.565807.76710HepG2AKAP8
CDHR5ENSG00000099834.1447.0096018.594601.338002.828002.05360HepG2AKAP8L
CDHR5ENSG00000099834.1453.8644023.444701.200002.355601.62720HepG2ASCC1
CDHR5ENSG00000099834.1472.801907.190003.339809.235507.71880HepG2BCLAF1
CDHR5ENSG00000099834.14414.0261022.274304.2162064.8594062.05750HepG2CIRBP
CDHR5ENSG00000099834.1428.389706.713402.080202.293701.36810HepG2YBX3
CDHR5ENSG00000099834.1434.4054010.203701.753403.468602.76580HepG2CELF1
CDHR5ENSG00000099834.1446.9092014.434901.700201.972301.38700HepG2DDX21
CDHR5ENSG00000099834.1478.1084027.141801.524904.314903.54790HepG2DDX3X
CDHR5ENSG00000099834.1497.9856020.226302.2762010.287208.48740HepG2DDX5
CDHR5ENSG00000099834.14234.2991017.701803.7263041.1984039.40140HepG2DKC1
CDHR5ENSG00000099834.1428.026106.588902.088603.254202.49650HepG2DNAJC21
CDHR5ENSG00000099834.1491.1390013.013102.808009.537207.95300HepG2EEF2
CDHR5ENSG00000099834.1462.7248013.679502.196903.928402.66770HepG2EIF3G
CDHR5ENSG00000099834.1478.1850024.767601.658305.069104.20670HepG2EIF4A3
CDHR5ENSG00000099834.1441.0364015.187501.433902.702302.10690HepG2ETF1
CDHR5ENSG00000099834.144.3253018.08600-2.064002.173201.43380HepG2EWSR1
CDHR5ENSG00000099834.146.9528029.47670-2.083902.631701.88000HepG2FIP1L1
CDHR5ENSG00000099834.14133.7926023.102602.533809.202507.38260HepG2FTO
CDHR5ENSG00000099834.1463.8048021.842401.546403.934303.00410HepG2FUBP3
CDHR5ENSG00000099834.14104.7433023.183802.175609.823008.60790HepG2G3BP1
CDHR5ENSG00000099834.1460.6220024.616601.300102.860901.95220HepG2G3BP2
CDHR5ENSG00000099834.1434.826809.401201.889203.024902.08550HepG2GEMIN5
CDHR5ENSG00000099834.1452.907408.643002.613806.298404.73740HepG2GNB2L1
CDHR5ENSG00000099834.14521.6893026.137704.3189034.8742032.90620HepG2GPKOW
CDHR5ENSG00000099834.1461.335106.652103.204709.281808.19960HepG2HNRNPA1
CDHR5ENSG00000099834.14107.4503024.944002.106808.978407.91650HepG2HNRNPLL
CDHR5ENSG00000099834.1440.435107.351702.459405.508204.67480HepG2HNRNPU
CDHR5ENSG00000099834.1450.3529023.930601.073102.517001.82570HepG2IGF2BP1
CDHR5ENSG00000099834.1450.321104.531003.473204.253502.58170HepG2ILF3
CDHR5ENSG00000099834.1467.8492023.704101.517103.665402.49220HepG2KHSRP
CDHR5ENSG00000099834.1469.8551025.446801.456802.901501.90650HepG2MTPAP
CDHR5ENSG00000099834.1495.0221025.734601.884506.828705.85430HepG2NCBP2
CDHR5ENSG00000099834.1486.229107.494903.5241010.270008.11180HepG2NONO
CDHR5ENSG00000099834.14141.6040022.120002.678308.597707.33100HepG2NSUN2
CDHR5ENSG00000099834.141.5018016.35660-3.445103.278502.62850HepG2PCBP1
CDHR5ENSG00000099834.1440.1415011.777201.769003.540302.37250HepG2PCBP2
CDHR5ENSG00000099834.1439.191308.733602.165804.254002.71690HepG2PKM
CDHR5ENSG00000099834.1431.990506.556802.286504.224903.33440HepG2PPIL4
CDHR5ENSG00000099834.1457.901206.267003.207607.343306.10300HepG2PRPF8
CDHR5ENSG00000099834.14182.8680010.378804.1390038.2299036.32590HepG2PUF60
CDHR5ENSG00000099834.1441.4250011.010701.911503.945903.14870HepG2PUM2
CDHR5ENSG00000099834.1497.9980018.844702.3785011.8975010.77310HepG2PUS1
CDHR5ENSG00000099834.14139.5549025.224402.467806.915004.10580HepG2RBM14
CDHR5ENSG00000099834.141.6768012.69400-2.920402.068201.60270HepG2RBM22
CDHR5ENSG00000099834.1441.8863016.359401.356302.365501.73650HepG2RBM25
CDHR5ENSG00000099834.1433.822608.290102.028402.502301.49490HepG2RCC2
CDHR5ENSG00000099834.1443.9690018.522001.247101.967901.49470HepG2NELFE
CDHR5ENSG00000099834.14132.3602011.172503.5663021.3512019.00460HepG2RPS10
CDHR5ENSG00000099834.1440.132609.415702.091503.693702.77300HepG2RPS2
CDHR5ENSG00000099834.1490.8915024.687701.880306.868005.79710HepG2SF3B1
CDHR5ENSG00000099834.1433.436709.958601.747303.357702.59740HepG2SLBP
CDHR5ENSG00000099834.14170.9702027.470102.6377010.721809.19060HepG2SNRNP70
CDHR5ENSG00000099834.141.6993014.33750-3.076802.434701.95410HepG2SRFBP1
CDHR5ENSG00000099834.1463.5950010.251602.633009.721008.64230HepG2SRSF5
CDHR5ENSG00000099834.1496.8280012.448502.9593010.865209.97870HepG2SSB
CDHR5ENSG00000099834.14589.509008.103806.1847087.3228084.69810HepG2SUPV3L1
CDHR5ENSG00000099834.1447.7893016.253301.555903.390102.77920HepG2TAF15
CDHR5ENSG00000099834.1468.9249011.258002.614003.501302.30740HepG2TBRG4
CDHR5ENSG00000099834.1446.231307.137902.695206.553405.84410HepG2TIAL1
CDHR5ENSG00000099834.1447.5672010.145202.229104.603503.44240HepG2TUFM
CDHR5ENSG00000099834.14129.1550024.152702.4187016.0077014.59690HepG2UPF1
CDHR5ENSG00000099834.1469.164107.977503.115907.541406.35740HepG2XRN2
CDHR5ENSG00000099834.1438.2160012.886601.568202.983202.28990HepG2ZC3H8
CDHR5ENSG00000099834.14414.5770026.563803.9640051.5784049.98440HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CDHR5 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CDHR5 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CDHR5 is not avaliable on ENCORE database.