CARS2

General Information

Gene Name : CARS2
Gene ID : ENSG00000134905.16
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CARS2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CARS2	ENSG00000134905.16	17.38	26.26	21.82	ENCSR000AEF
HepG2	CARS2	ENSG00000134905.16	43.50	26.20	34.85	ENCSR985KAT
K562	CARS2	ENSG00000134905.16	15.61	11.52	13.56	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CARS2 is not avaliable on ENCORE database.

Proteins bound to RNA

CARS2 RNA is bound by 23 proteins.

CanvasJS.com

eCLIP assay for CARS2 is not avaliable on ENCORE database.

23 proteins are bound to CARS2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr13	111314661	111314692	-	intron-Distal	8.98743	148.54892	HepG2	RBFOX2
chr13	111314692	111314728	-	intron-Distal	8.00628	148.53499	HepG2	RBFOX2
chr13	111314532	111314584	-	intron-Distal	7.79828	130.75316	HepG2	RBFOX2
chr13	111314728	111314773	-	intron-Distal	6.66500	114.63819	HepG2	RBFOX2
chr13	111314477	111314532	-	intron-Distal	8.39265	100.53129	HepG2	RBFOX2
chr13	111314773	111314832	-	intron-Distal	6.28544	84.76085	HepG2	RBFOX2
chr13	111314656	111314736	-	intron-Distal	7.89522	38.09689	K562	DROSHA
chr13	111314531	111314578	-	intron-Distal	7.87937	37.24301	K562	DROSHA
chr13	111314578	111314656	-	intron-Distal	7.17505	35.93445	K562	DROSHA
chr13	111299415	111299448	-	intron-Distal,intron-Proximal	5.44953	31.08267	HepG2	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 108 entries

eCLIP assay for CARS2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CARS2 is not available on ENCORE database.
34 RBPs can affect the levels of CARS2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CARS2 is not available on ENCORE database.

34 RBPs can affect the gene expression of CARS2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CARS2	ENSG00000134905.12	349.88460	576.04920	-0.71930	7.88420	7.01610	HepG2	TAF15
CARS2	ENSG00000134905.12	568.60370	380.80140	0.57830	6.37470	5.45690	HepG2	SAFB2
CARS2	ENSG00000134905.12	1001.76930	710.81960	0.49490	6.25900	5.36550	HepG2	CELF1
CARS2	ENSG00000134905.12	478.48350	723.47420	-0.59650	5.56360	4.75750	HepG2	PUF60
CARS2	ENSG00000134905.12	1015.39390	767.99560	0.40280	5.49430	4.71780	HepG2	PUM1
CARS2	ENSG00000134905.12	511.42620	298.72440	0.77560	5.67280	4.57800	HepG2	UCHL5
CARS2	ENSG00000134905.12	774.52830	998.25290	-0.36610	4.22650	3.64580	HepG2	SRFBP1
CARS2	ENSG00000134905.12	783.63400	530.52320	0.56270	4.51060	3.63730	HepG2	HNRNPK
CARS2	ENSG00000134905.12	318.73090	503.10690	-0.65850	4.55160	3.57290	HepG2	CIRBP
CARS2	ENSG00000134905.12	272.80660	170.00190	0.68220	4.24560	3.26960	K562	EIF3G
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 36 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CARS2 is not available on ENCORE database.

27 RBPs can affect the splicing of CARS2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	CARS2	ENSG00000134905.12	chr13	-	111294661	111296529	111294661	111294868	111296731	111296830	0.45800	0.00000	0.00152	longer	HepG2	TIA1
SE	CARS2	ENSG00000134905.12	chr13	-	111296411	111296529	111294661	111294868	111296731	111296953	0.45500	0.00001	0.00362	included	HepG2	TIA1
SE	CARS2	ENSG00000134905.12	chr13	-	111319163	111319275	111315797	111315865	111319686	111319820	0.11200	0.00001	0.00104	included	HepG2	HNRNPL
A3SS	CARS2	ENSG00000134905.12	chr13	-	111296731	111296953	111296731	111296830	111298313	111298437	0.28600	0.00001	0.00177	longer	K562	EFTUD2
A3SS	CARS2	ENSG00000134905.12	chr13	-	111296731	111296953	111296731	111296830	111298313	111298437	0.17100	0.00002	0.00533	longer	HepG2	TAF15
SE	CARS2	ENSG00000134905.12	chr13	-	111303380	111303447	111299447	111299586	111315797	111315865	0.20900	0.00003	0.05928	included	K562	CPEB4
RI	CARS2	ENSG00000134905.12	chr13	-	111294661	111296529	111294661	111294868	111296411	111296529	-0.80500	0.00003	0.00458	excluded	K562	KHSRP
A3SS	CARS2	ENSG00000134905.12	chr13	-	111296731	111296953	111296731	111296830	111298313	111298437	0.14900	0.00004	0.01318	longer	HepG2	PTBP1
RI	CARS2	ENSG00000134905.12	chr13	-	111294661	111296529	111294661	111294868	111296411	111296529	-0.72100	0.00004	0.00288	excluded	K562	TARDBP
RI	CARS2	ENSG00000134905.12	chr13	-	111294661	111296529	111294661	111294868	111296411	111296529	-0.77400	0.00007	0.03277	excluded	K562	TRA2A

Showing 1 to 10 of 40 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CARS2

General Information

Functions

Localization

Domains (AlphaFold: CARS2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CARS2 is not avaliable on ENCORE database.

23 proteins are bound to CARS2 RNA:

eCLIP assay for CARS2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CARS2 is not available on ENCORE database.

34 RBPs can affect the gene expression of CARS2 :

The Knockdown/knockout RNA-Seq assay for CARS2 is not available on ENCORE database.

27 RBPs can affect the splicing of CARS2 :

The Knockdown/knockout RNA-Seq assay for CARS2 is not avaliable on ENCORE database.