CAPS

General Information

Gene Name       : CAPS
Gene ID             : ENSG00000105519.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CAPS)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CAPSENSG00000105519.150.671.130.90ENCSR000AEF
HepG2CAPSENSG00000105519.152.430.701.56ENCSR985KAT
K562CAPSENSG00000105519.150.730.400.56ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CAPS is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on CAPS RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CAPS is not avaliable on ENCORE database.






NO known proteins are bound to CAPS RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CAPS is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CAPS is not available on ENCORE database.

  • 68 RBPs can affect the levels of CAPS.  








The Knockdown/knockout RNA-Seq assay for CAPS is not available on ENCORE database.





68 RBPs can affect the gene expression of CAPS :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CAPSENSG00000105519.830.2511075.84590-1.326103.705602.47270HepG2AATF
CAPSENSG00000105519.8177.5372074.588501.251006.538305.35660HepG2ASCC1
CAPSENSG00000105519.899.09190188.69080-0.929202.594801.92690HepG2AUH
CAPSENSG00000105519.8172.6859068.235501.339504.872403.62390HepG2BCCIP
CAPSENSG00000105519.8133.9257070.863400.918203.331402.48800HepG2CIRBP
CAPSENSG00000105519.840.6604086.08210-1.082102.744301.98340HepG2CNOT7
CAPSENSG00000105519.856.40040125.80730-1.157404.990704.17370HepG2CELF1
CAPSENSG00000105519.874.20340135.23530-0.865903.527702.70820HepG2DAZAP1
CAPSENSG00000105519.8163.6453089.610700.868705.049303.96820HepG2DDX19B
CAPSENSG00000105519.8160.1924074.168301.110804.748903.95930HepG2DDX6
CAPSENSG00000105519.8160.1830092.696400.789003.434602.69090HepG2DKC1
CAPSENSG00000105519.896.0867041.359301.216005.003304.16720HepG2DNAJC2
CAPSENSG00000105519.8154.8967071.312901.119004.821404.05000HepG2EIF2S1
CAPSENSG00000105519.8128.7710079.016900.704502.437201.42360HepG2EIF3G
CAPSENSG00000105519.8245.1325078.815501.6369012.1728010.86090HepG2EIF4A3
CAPSENSG00000105519.8458.55020216.687101.081409.708308.69240HepG2ETF1
CAPSENSG00000105519.849.28200103.62510-1.072202.730201.96600HepG2FIP1L1
CAPSENSG00000105519.8145.2762079.502300.869603.248702.50100HepG2FXR1
CAPSENSG00000105519.8201.3260073.760201.448509.159907.98480HepG2G3BP1
CAPSENSG00000105519.8199.1347078.292701.346707.891306.37240HepG2G3BP2
CAPSENSG00000105519.8134.2350050.749001.403205.408104.53260HepG2GPKOW
CAPSENSG00000105519.890.8060042.120601.108203.302102.60490HepG2HNRNPA1
CAPSENSG00000105519.8158.4865046.853601.758009.527208.30370HepG2HNRNPC
CAPSENSG00000105519.8109.3141067.753300.690002.269501.61540HepG2HNRNPF
CAPSENSG00000105519.8121.1377066.717800.860403.314002.52690HepG2IGF2BP1
CAPSENSG00000105519.8157.7755082.028900.943603.984702.50410HepG2KHDRBS1
CAPSENSG00000105519.8188.3889075.409501.320806.624804.99800HepG2KHSRP
CAPSENSG00000105519.8190.2500058.219801.7082010.217308.62490HepG2LARP4
CAPSENSG00000105519.8133.1345075.151800.824902.976101.71620HepG2LIN28B
CAPSENSG00000105519.8164.9208079.530001.052104.631703.78940HepG2MAGOH
CAPSENSG00000105519.8135.5920042.949801.658407.653506.45100HepG2NSUN2
CAPSENSG00000105519.898.1509027.596201.830404.045901.81350HepG2NUFIP2
CAPSENSG00000105519.8160.1996088.713000.852604.070303.36080HepG2PCBP1
CAPSENSG00000105519.8122.9412068.192800.850202.778601.73490HepG2PCBP2
CAPSENSG00000105519.882.1031041.512900.983803.056302.28590HepG2PPIL4
CAPSENSG00000105519.863.80500135.80630-1.089804.470703.62930HepG2PUM2
CAPSENSG00000105519.826.9824065.80510-1.286202.560201.88120HepG2RAVER1
CAPSENSG00000105519.856.47450181.10100-1.681105.743305.06520HepG2RBM22
CAPSENSG00000105519.8259.3402088.727101.5473013.3501011.93690HepG2RBM25
CAPSENSG00000105519.8174.17790100.459300.793903.411402.82380HepG2NELFE
CAPSENSG00000105519.8187.3512093.557901.001705.447304.61930HepG2RECQL
CAPSENSG00000105519.8118.1289064.645200.869602.667001.73800HepG2RPS10
CAPSENSG00000105519.8153.5680049.342501.637907.628406.66830HepG2RPS19
CAPSENSG00000105519.8142.2608079.582000.837903.062802.22150HepG2RPS2
CAPSENSG00000105519.8177.0837086.444101.034504.585303.55790HepG2RPS3A
CAPSENSG00000105519.8103.0100026.813901.941604.499002.67240HepG2SF1
CAPSENSG00000105519.8158.8455093.984600.757003.071002.45190HepG2SF3B4
CAPSENSG00000105519.8159.8436053.335401.583406.841405.60700HepG2SNRNP70
CAPSENSG00000105519.880.95450204.53030-1.337104.153603.57630HepG2SRFBP1
CAPSENSG00000105519.842.7392098.09650-1.198603.613703.09080HepG2SRSF1
CAPSENSG00000105519.881.64250143.75920-0.816303.247102.58410HepG2SUCLG1
CAPSENSG00000105519.8187.5461088.164401.088906.349205.55960HepG2TAF15
CAPSENSG00000105519.883.4295047.227600.820801.946401.32450HepG2TARDBP
CAPSENSG00000105519.8149.4586045.217301.7247010.656909.78550HepG2TIAL1
CAPSENSG00000105519.887.2456045.630800.935003.047602.46250HepG2TRIM56
CAPSENSG00000105519.8230.61620125.092400.882405.407404.13810HepG2TUFM
CAPSENSG00000105519.878.1962027.867501.488402.507401.57290HepG2U2AF2
CAPSENSG00000105519.842.5749085.31490-1.002803.049002.42550HepG2UTP3
CAPSENSG00000105519.8245.5129065.737601.9009011.9107010.43210HepG2XRN2
CAPSENSG00000105519.862.0539097.18670-0.647201.934401.45490HepG2ZNF622
CAPSENSG00000105519.858.73430114.48160-0.962803.426902.80790K562AGGF1
CAPSENSG00000105519.861.56540119.12070-0.952203.513102.77290K562AKAP8L
CAPSENSG00000105519.8120.7513042.506401.506207.355706.26530K562EIF2S2
CAPSENSG00000105519.87.2279026.20910-1.858402.481201.81800K562G3BP2
CAPSENSG00000105519.855.6573025.706601.114302.187001.64770K562HNRNPC
CAPSENSG00000105519.890.2280040.589401.152403.484802.59420K562HSPD1
CAPSENSG00000105519.845.7581099.26990-1.117303.067702.13130K562NAA15
CAPSENSG00000105519.822.6881053.30970-1.232502.995902.30760K562PTBP1
CAPSENSG00000105519.824.44340118.15330-2.273109.699108.73080K562PUS1
CAPSENSG00000105519.840.53590115.10750-1.505706.624405.73300K562RBM15
CAPSENSG00000105519.890.8565033.815001.425804.124103.12440K562RPS19
CAPSENSG00000105519.814.2782052.26890-1.872104.421603.53210K562SRSF1
CAPSENSG00000105519.8100.1420052.883000.921102.976102.24260K562TARDBP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CAPS is not available on ENCORE database.






No RBPs affect the alternative splcing events of CAPS on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CAPS is not avaliable on ENCORE database.