CAMK2D

General Information

Gene Name       : CAMK2D
Gene ID             : ENSG00000145349.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CAMK2D)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CAMK2DENSG00000145349.1611.0610.3210.69ENCSR000AEF
HepG2CAMK2DENSG00000145349.1617.6829.6723.68ENCSR985KAT
K562CAMK2DENSG00000145349.160.090.030.06ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CAMK2D is not avaliable on ENCORE database.



Proteins bound to RNA
  • CAMK2D RNA is bound by 12 proteins.  







eCLIP assay for CAMK2D is not avaliable on ENCORE database.





12 proteins are bound to CAMK2D RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4114375633114375698-3'-UTR,CDS,intron-Distal3.635836.57527HepG2U2AF2
chr4114374822114374930-3'-UTR,intron-Distal4.7191014.97374HepG2PTBP1
chr4114682788114682835-5'-UTR,intron-Distal,intron-Proximal4.388795.48791HepG2DDX3X
chr4114468798114468902-CDS,intron-Distal,intron-Proximal4.7858313.19288HepG2RBFOX2
chr4114680469114680570-CDS,intron-Distal,intron-Proximal3.203417.99106HepG2GRWD1
chr4114680412114680491-CDS,intron-Distal,intron-Proximal4.648514.68690HepG2PRPF8
chr4114473179114473253-CDS,intron-Distal,intron-Proximal3.391855.30095HepG2PPIG
chr4114434423114434515-CDS,intron-Distal,intron-Proximal5.291954.68690HepG2PRPF8
chr4114430786114430834-CDS,intron-Distal,intron-Proximal3.474703.59112HepG2PPIG
chr4114582871114582927-CDS,intron-Distal3.685746.20926HepG2PPIG
chr4114386685114386761-CDS,intron-Distal,intron-Proximal3.009303.40321HepG2GRWD1
chr4114430733114430840-CDS,intron-Distal,intron-Proximal4.119063.86479HepG2PRPF8
chr4114506798114506831-intron-Distal6.363557.62903HepG2QKI
chr4114565690114565762-intron-Distal3.516544.08528HepG2SUGP2
chr4114654150114654315-intron-Distal4.341734.24565HepG2HNRNPL
chr4114614736114614802-intron-Distal3.333803.12625HepG2QKI
chr4114678853114678948-intron-Distal4.315324.51299HepG2SUGP2
chr4114678949114679053-intron-Distal3.369656.64539HepG2QKI
chr4114547266114547372-intron-Distal4.5664811.19329HepG2HNRNPL
chr4114419163114419250-intron-Distal4.906003.50357HepG2QKI
chr4114559406114559528-intron-Distal3.672585.50064HepG2PTBP1
chr4114431991114432148-intron-Distal4.436276.74598HepG2QKI
chr4114582577114582769-intron-Distal4.362204.00239HepG2KHSRP
chr4114506715114506798-intron-Distal5.394647.75161HepG2QKI
chr4114627826114627955-intron-Distal5.210406.58335HepG2QKI
chr4114506831114506871-intron-Distal6.125346.93116HepG2QKI
chr4114527729114527842-intron-Distal3.982413.60235HepG2HNRNPM
chr4114560783114560876-intron-Distal3.872343.09122HepG2PTBP1
chr4114591482114591581-intron-Distal4.502324.51735HepG2QKI
chr4114430533114430629-intron-Distal3.002263.04623HepG2KHSRP
chr4114680339114680447-intron-Distal,intron-Proximal3.188243.31157HepG2KHSRP
chr4114546748114546827-intron-Distal3.319854.26114HepG2HNRNPL
chr4114458770114458893-intron-Distal5.408867.27507HepG2U2AF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CAMK2D is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CAMK2D is not available on ENCORE database.

  • 55 RBPs can affect the levels of CAMK2D.  








The Knockdown/knockout RNA-Seq assay for CAMK2D is not available on ENCORE database.





55 RBPs can affect the gene expression of CAMK2D :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CAMK2DENSG00000145349.12638.42000872.67480-0.450903.380702.28500HepG2ADAR
CAMK2DENSG00000145349.121430.851701825.02840-0.351002.112701.64110HepG2AKAP1
CAMK2DENSG00000145349.12500.07130931.93970-0.898108.436006.76000HepG2BCCIP
CAMK2DENSG00000145349.12776.519501186.44820-0.611605.022904.24790HepG2BOP1
CAMK2DENSG00000145349.12814.692001089.25840-0.419002.601001.93170HepG2CPSF6
CAMK2DENSG00000145349.12786.202101008.26480-0.358902.476801.43190HepG2CPSF7
CAMK2DENSG00000145349.12722.41400894.90070-0.308902.665701.66830HepG2YBX3
CAMK2DENSG00000145349.12949.993401292.82820-0.444506.067805.18580HepG2CELF1
CAMK2DENSG00000145349.121108.87090933.390800.248402.590501.78160HepG2DDX19B
CAMK2DENSG00000145349.121232.59430856.194600.525605.955704.61870HepG2DDX24
CAMK2DENSG00000145349.12919.286701501.67950-0.708006.759505.82810HepG2DDX6
CAMK2DENSG00000145349.12669.89390870.94590-0.378704.610303.80400HepG2DNAJC2
CAMK2DENSG00000145349.12311.259701443.74800-2.2136054.8491052.53870HepG2EIF2S1
CAMK2DENSG00000145349.12542.044401595.58240-1.5576028.4971026.48190HepG2EIF4A3
CAMK2DENSG00000145349.121089.236301493.30940-0.455203.428202.69160HepG2G3BP1
CAMK2DENSG00000145349.121544.744501234.853100.322902.044501.48920HepG2GPKOW
CAMK2DENSG00000145349.12713.766501052.67240-0.560503.191701.49790HepG2GTF2F1
CAMK2DENSG00000145349.12721.05830986.81060-0.452703.743402.94690HepG2HNRNPC
CAMK2DENSG00000145349.121038.742501511.84660-0.541505.522404.56160HepG2HNRNPK
CAMK2DENSG00000145349.121006.608901266.43500-0.331304.699603.83750HepG2HNRNPL
CAMK2DENSG00000145349.121524.091201178.434600.371002.875502.23510HepG2HNRNPLL
CAMK2DENSG00000145349.12958.672501517.95660-0.663007.028406.00010HepG2IGF2BP2
CAMK2DENSG00000145349.12739.577401001.33520-0.437206.238405.18120HepG2ILF2
CAMK2DENSG00000145349.121317.267601689.37560-0.358902.092901.37830HepG2LARP4
CAMK2DENSG00000145349.12757.41070998.74840-0.399002.673001.48530HepG2LIN28B
CAMK2DENSG00000145349.121082.174101610.22150-0.573305.448104.53670HepG2MAGOH
CAMK2DENSG00000145349.121069.505701657.44000-0.632006.261405.32460HepG2NCBP2
CAMK2DENSG00000145349.12994.793701378.54630-0.470706.221705.08200HepG2NOL12
CAMK2DENSG00000145349.121099.480901476.18920-0.425103.173002.40160HepG2PABPC4
CAMK2DENSG00000145349.12718.13790970.34340-0.434205.196804.08270HepG2PARN
CAMK2DENSG00000145349.121066.791701390.48560-0.382305.182104.39320HepG2PCBP1
CAMK2DENSG00000145349.121155.53640972.637100.248502.235801.53340HepG2PRPF4
CAMK2DENSG00000145349.121256.01290706.918300.8291010.013008.59720HepG2PRPF8
CAMK2DENSG00000145349.121712.068201414.857600.275003.150902.57470HepG2PTBP1
CAMK2DENSG00000145349.121186.953201395.85860-0.233901.891501.33100HepG2PUM2
CAMK2DENSG00000145349.121692.454501027.950700.7192019.0948017.73750HepG2PUS1
CAMK2DENSG00000145349.122252.387101532.354500.555609.486208.42980HepG2QKI
CAMK2DENSG00000145349.121693.867501020.627700.730804.629503.73000HepG2RAVER1
CAMK2DENSG00000145349.121797.557801390.699300.370103.666502.89710HepG2RBM25
CAMK2DENSG00000145349.121345.440201574.61190-0.226902.215801.72080HepG2NELFE
CAMK2DENSG00000145349.12522.78140755.65720-0.531504.845404.05760HepG2RPS19
CAMK2DENSG00000145349.12758.573301040.34120-0.455702.627501.69570HepG2SMNDC1
CAMK2DENSG00000145349.12742.174901297.88480-0.806305.999004.84240HepG2SNRNP70
CAMK2DENSG00000145349.122322.913401691.939400.457209.652108.87150HepG2SRFBP1
CAMK2DENSG00000145349.122387.066301537.560000.6345016.5861015.63450HepG2SRSF1
CAMK2DENSG00000145349.12764.663001299.21830-0.7647016.8466015.48660HepG2SRSF5
CAMK2DENSG00000145349.121056.950401250.87850-0.243002.490901.96110HepG2SRSF9
CAMK2DENSG00000145349.121745.804401469.005900.249002.947902.42250HepG2SSB
CAMK2DENSG00000145349.121697.878601477.611300.200401.949701.41080HepG2SUCLG1
CAMK2DENSG00000145349.12893.232401381.99150-0.6296010.849309.85480HepG2TAF15
CAMK2DENSG00000145349.12683.05080952.61140-0.479905.143404.50530HepG2TIAL1
CAMK2DENSG00000145349.12677.40140961.04270-0.504607.202706.36690HepG2TRIM56
CAMK2DENSG00000145349.121593.624301057.443700.591606.836405.86120HepG2U2AF1
CAMK2DENSG00000145349.12820.185701360.65790-0.730307.370905.97920HepG2UBE2L3
CAMK2DENSG00000145349.121109.10010959.863000.208401.885501.31650HepG2ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CAMK2D is not available on ENCORE database.





5 RBPs can affect the splicing of CAMK2D :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECAMK2DENSG00000145349.12chr4-1146005581146006521145828681145829281146804751146805700.278000.001450.05917includedHepG2SFPQ
SECAMK2DENSG00000145349.12chr4-1143768811143769771143721871143756711143784901143787190.267000.002280.07946includedHepG2HNRNPU
SECAMK2DENSG00000145349.12chr4-1143768811143769771143721871143756711143784901143787190.628000.000000.00001includedHepG2HNRNPC
A5SSCAMK2DENSG00000145349.12chr4-1143784461143787191143784901143787191143721871143756710.291000.000050.01770longerHepG2IGF2BP3
MXECAMK2DENSG00000145349.12chr4-114468799114468872114469812114469885114458496114458599114473186114473252-0.162000.000020.000962includedHepG2FTO

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CAMK2D is not avaliable on ENCORE database.