ARHGAP6

General Information

Gene Name       : ARHGAP6
Gene ID             : ENSG00000047648.21
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ARHGAP6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ARHGAP6ENSG00000047648.211.011.001.00ENCSR000AEF
HepG2ARHGAP6ENSG00000047648.210.040.020.03ENCSR985KAT
K562ARHGAP6ENSG00000047648.2137.9137.5537.73ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ARHGAP6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ARHGAP6 RNA is bound by 26 proteins.  







eCLIP assay for ARHGAP6 is not avaliable on ENCORE database.





26 proteins are bound to ARHGAP6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX1116207011162188-3'-UTR,CDS,intron-Distal,intron-Proximal4.248598.62696K562RBM15
chrX1116228611162331-3'-UTR,CDS,intron-Distal3.434015.15749K562YBX3
chrX1115583811155966-3'-UTR,intron-Distal3.168104.66232K562FAM120A
chrX1116225111162286-3'-UTR,CDS,intron-Distal3.384245.11155K562YBX3
chrX1115599411156059-3'-UTR,intron-Distal4.259516.42251K562FAM120A
chrX1116038211160449-3'-UTR,CDS,intron-Distal,intron-Proximal3.805324.77019K562BUD13
chrX1144573011445909-5'-UTR,intron-Distal,intron-Proximal3.606573.24636K562DDX3X
chrX1119748511197572-CDS,intron-Distal4.045443.66349K562LIN28B
chrX1120703211207107-CDS,intron-Distal,intron-Proximal4.144587.51551K562UCHL5
chrX1119751511197571-CDS,intron-Distal3.713114.82082K562ZNF622
chrX1120444511204534-CDS,intron-Distal3.918753.44423K562BUD13
chrX1119750611197561-CDS,intron-Distal4.089619.22606K562YBX3
chrX1119746411197564-CDS,intron-Distal3.059624.30396K562UCHL5
chrX1120698011207090-CDS,intron-Distal3.782484.00952K562ZNF800
chrX1120695711207032-CDS,intron-Distal3.750035.57819K562UCHL5
chrX1141909811419161-intron-Distal3.453664.79863K562TARDBP
chrX1139548311395600-intron-Distal3.131913.40400K562HNRNPL
chrX1120319311203244-intron-Distal4.064457.57220K562HNRNPL
chrX1138506611385159-intron-Distal4.3292521.75498K562PTBP1
chrX1139410511394156-intron-Distal5.6693531.09651K562PTBP1
chrX1138898011389102-intron-Distal4.253854.58794K562KHSRP
chrX1142699411427084-intron-Distal5.377967.68107K562EIF4G2
chrX1135309711353214-intron-Distal3.398014.08075K562SAFB2
chrX1120322611203313-intron-Distal3.242663.41960K562GTF2F1
chrX1140967311409796-intron-Distal3.473114.56067K562ILF3
chrX1134811211348214-intron-Distal3.062553.29251K562KHSRP
chrX1140531111405383-intron-Distal5.541649.53650K562ILF3
chrX1131682511316959-intron-Distal7.4076623.55471K562DROSHA
chrX1142697911427044-intron-Distal3.762204.60942K562TARDBP
chrX1140797911408076-intron-Distal3.544226.43389K562ILF3
chrX1131665111316777-intron-Distal4.382146.26242K562RBFOX2
chrX1136479111364811-intron-Distal6.5417728.42750K562PTBP1
chrX1142454011424645-intron-Distal5.0261221.77353K562TARDBP
chrX1120320011203250-intron-Distal4.7503817.19718K562AGGF1
chrX1136913111369253-intron-Distal3.683445.36040K562EIF4G2
chrX1139634511396470-intron-Distal5.4734413.30269K562KHSRP
chrX1133895811339030-intron-Distal5.393899.32163K562TARDBP
chrX1136481111364860-intron-Distal6.7529534.33595K562PTBP1
chrX1143881811438945-intron-Distal4.6193217.82173K562TARDBP
chrX1133764111337801-intron-Distal3.389804.13620K562KHSRP
chrX1138440411384498-intron-Distal4.238777.29464K562TARDBP
chrX1140560311405656-intron-Distal3.971073.84723K562ILF3
chrX1140483711404914-intron-Distal4.148565.39628K562PTBP1
chrX1139395611394018-intron-Distal4.8623814.94628K562PTBP1
chrX1138458011384663-intron-Distal5.2236210.97098K562PTBP1
chrX1126425511264380-intron-Distal3.881466.71321K562HNRNPL
chrX1137761011377686-intron-Distal4.509025.44433K562EXOSC5
chrX1137731711377415-intron-Distal3.406333.99385K562CSTF2T
chrX1140699311407077-intron-Distal3.673834.68595K562ILF3
chrX1140983411409966-intron-Distal3.261457.96098K562ILF3
chrX1139116711391235-intron-Distal3.991923.46495K562TARDBP
chrX1137470211374769-intron-Distal3.749493.18722K562KHDRBS1
chrX1120327011203317-intron-Distal3.309336.72040K562AGGF1
chrX1136910711369204-intron-Distal4.691194.85626K562TARDBP
chrX1120324411203319-intron-Distal4.1031116.49785K562HNRNPL
chrX1131691811317000-intron-Distal4.807854.14162K562RBFOX2
chrX1131689111316990-intron-Distal4.864203.80336K562DDX6
chrX1139406311394105-intron-Distal5.8608124.50495K562PTBP1
chrX1138510711385175-intron-Distal3.960803.23532K562MATR3
chrX1140718611407300-intron-Distal3.445694.81290K562ILF3
chrX1131676611316882-intron-Distal4.078623.83202K562DDX6
chrX1142821411428297-intron-Distal3.304656.21100K562TARDBP
chrX1139180911391912-intron-Distal4.1191511.51516K562QKI
chrX1138494811385066-intron-Distal4.4083310.77763K562PTBP1
chrX1140542111405594-intron-Distal3.6903110.25091K562ILF3
chrX1139385511393940-intron-Distal4.2045515.40793K562PTBP1
chrX1120333511203381-intron-Distal4.528376.32746K562HNRNPL
chrX1133963711339703-intron-Distal3.779915.94848K562TARDBP
chrX1133883311338901-intron-Distal4.258093.88340K562TARDBP
chrX1120332811203380-intron-Distal4.2977610.58265K562AGGF1
chrX1131679111316890-intron-Distal5.607106.81444K562RBFOX2
chrX1137553611375643-intron-Distal3.872483.82060K562KHDRBS1
chrX1139415611394179-intron-Distal4.874825.89856K562PTBP1
chrX1132068911320760-intron-Distal3.959145.50595K562TARDBP
chrX1136662711366664-intron-Distal4.292704.48296K562LIN28B
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ARHGAP6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ARHGAP6 is not available on ENCORE database.

  • 49 RBPs can affect the levels of ARHGAP6.  








The Knockdown/knockout RNA-Seq assay for ARHGAP6 is not available on ENCORE database.





49 RBPs can affect the gene expression of ARHGAP6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ARHGAP6ENSG00000047648.1710.162100.935903.440602.144601.67840HepG2SSB
ARHGAP6ENSG00000047648.171737.966601096.089100.664909.357507.19180K562AARS
ARHGAP6ENSG00000047648.17758.018901005.44400-0.407504.595802.61520K562AKAP1
ARHGAP6ENSG00000047648.172143.353302743.44200-0.356103.494302.35760K562AKAP8
ARHGAP6ENSG00000047648.17637.232201931.82490-1.6001040.4952038.46790K562AQR
ARHGAP6ENSG00000047648.171601.781401330.636800.267502.148501.44860K562CPSF6
ARHGAP6ENSG00000047648.172532.522703155.50380-0.317303.488302.39070K562CELF1
ARHGAP6ENSG00000047648.171581.340301018.776100.634209.426207.39140K562DDX3X
ARHGAP6ENSG00000047648.17597.30810948.34330-0.666903.569501.55520K562DNAJC2
ARHGAP6ENSG00000047648.171802.235601388.470300.376205.106104.17190K562EIF2S2
ARHGAP6ENSG00000047648.172014.423402566.54980-0.349504.870503.64170K562EIF4G2
ARHGAP6ENSG00000047648.171222.514501512.33370-0.306902.329501.55190K562FIP1L1
ARHGAP6ENSG00000047648.171617.521201041.395400.635206.683904.80140K562FKBP4
ARHGAP6ENSG00000047648.171789.187001353.880100.402103.562802.58820K562FMR1
ARHGAP6ENSG00000047648.17902.155901106.90210-0.295102.660002.06470K562FXR1
ARHGAP6ENSG00000047648.171146.405101609.97020-0.489907.114505.34200K562GLRX3
ARHGAP6ENSG00000047648.171077.674901850.28040-0.7798013.2673011.59320K562GRSF1
ARHGAP6ENSG00000047648.17875.661301268.29040-0.534406.425404.83200K562HNRNPA1
ARHGAP6ENSG00000047648.171338.050601965.50660-0.554803.411001.64520K562HNRNPAB
ARHGAP6ENSG00000047648.17774.409401199.12180-0.630807.813206.85770K562HNRNPC
ARHGAP6ENSG00000047648.17806.377001070.91410-0.409303.502902.20650K562HNRNPF
ARHGAP6ENSG00000047648.17542.11970869.10770-0.680905.458403.36320K562ILF3
ARHGAP6ENSG00000047648.172193.493802757.14600-0.329903.359402.44020K562KIF1C
ARHGAP6ENSG00000047648.171672.845301161.483500.526206.000903.84480K562LARP7
ARHGAP6ENSG00000047648.171751.281601398.297300.324602.944502.07750K562MAGOH
ARHGAP6ENSG00000047648.17960.407101692.69160-0.8176022.2152020.24270K562MTPAP
ARHGAP6ENSG00000047648.171551.621201062.836200.545807.569205.56520K562NCBP2
ARHGAP6ENSG00000047648.171506.429601880.63200-0.320105.646304.63590K562NSUN2
ARHGAP6ENSG00000047648.171928.701401366.808300.496706.695704.54000K562PCBP1
ARHGAP6ENSG00000047648.171588.261801244.147300.352203.017701.99820K562PCBP2
ARHGAP6ENSG00000047648.171033.104301720.18620-0.735608.551507.09220K562PCBP3
ARHGAP6ENSG00000047648.17852.334701319.48050-0.630508.729107.33950K562POLR2G
ARHGAP6ENSG00000047648.17660.83000913.61720-0.467303.491102.64760K562PRPF8
ARHGAP6ENSG00000047648.171122.063601358.52970-0.275902.209301.60540K562PTBP1
ARHGAP6ENSG00000047648.171984.029602800.33380-0.497206.253405.03070K562PUF60
ARHGAP6ENSG00000047648.172374.085202978.35190-0.327103.668002.42740K562PUM1
ARHGAP6ENSG00000047648.172385.292602918.44260-0.291003.446302.37280K562PUM2
ARHGAP6ENSG00000047648.171840.25270973.118400.919107.755505.31630K562RAVER1
ARHGAP6ENSG00000047648.172106.845002510.38260-0.252802.674802.09050K562RBM15
ARHGAP6ENSG00000047648.171647.852001269.858200.375802.925901.49270K562RBM34
ARHGAP6ENSG00000047648.172579.660601540.009400.744102.714601.52960K562SF1
ARHGAP6ENSG00000047648.171422.901301060.625500.423804.509203.40790K562SF3B4
ARHGAP6ENSG00000047648.17663.02700916.45140-0.467002.982001.66510K562SLBP
ARHGAP6ENSG00000047648.171109.394001331.80650-0.263601.956901.34930K562SRSF1
ARHGAP6ENSG00000047648.171703.902501323.419300.364503.356502.45280K562SYNCRIP
ARHGAP6ENSG00000047648.17694.433301034.11340-0.574504.937303.65450K562TIAL1
ARHGAP6ENSG00000047648.171279.07180988.740600.371302.378601.37670K562U2AF1
ARHGAP6ENSG00000047648.171161.343301706.26000-0.555007.455305.97690K562WDR3
ARHGAP6ENSG00000047648.171504.204002176.34350-0.532906.777205.33150K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ARHGAP6 is not available on ENCORE database.





6 RBPs can affect the splicing of ARHGAP6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEARHGAP6ENSG00000047648.17chrX-1116674911166839111620991116236811174648111747460.134000.000000.00161includedK562WDR3
SEARHGAP6ENSG00000047648.17chrX-1116674911166839111620991116236811174648111747460.106000.000530.00711includedK562AQR
SEARHGAP6ENSG00000047648.17chrX-1127292911272984112726671127282711445667114458930.063000.009890.08052includedK562AQR
SEARHGAP6ENSG00000047648.17chrX-111620991116236811160352111604331117464811174746-0.180000.000200.00446excludedK562PUS1
SEARHGAP6ENSG00000047648.17chrX-1116674911166839111620991116236811174648111747460.077000.000120.02686includedK562UPF1
SEARHGAP6ENSG00000047648.17chrX-1116674911166839111620991116236811174648111747460.243000.000000.00050includedK562HNRNPU
SEARHGAP6ENSG00000047648.17chrX-111620991116236811160352111604331117464811174746-0.143000.000970.02671excludedK562RBM15
A3SSARHGAP6ENSG00000047648.17chrX-1119621911196450111962191119636811197421111975720.071000.000010.00014longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ARHGAP6 is not avaliable on ENCORE database.