AL356356.1

General Information

Gene Name       : AL356356.1
Gene ID             : ENSG00000237781.3
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AL356356.1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878AL356356.1ENSG00000237781.30.000.000.00ENCSR000AEF
HepG2AL356356.1ENSG00000237781.30.000.000.00ENCSR985KAT
K562AL356356.1ENSG00000237781.30.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AL356356.1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • AL356356.1 RNA is bound by 16 proteins.  







eCLIP assay for AL356356.1 is not avaliable on ENCORE database.





16 proteins are bound to AL356356.1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1150523476150523535+3'-UTR,CDS,intron-Distal4.1007039.84224K562SF3B4
chr1150523525150523602+3'-UTR,CDS,intron-Distal3.1643410.33009K562UCHL5
chr1150524075150524116+3'-UTR,intron-Distal4.0539024.91360K562SF3B4
chr1150523542150523589+3'-UTR,intron-Distal3.9596426.86835K562SF3B4
chr1150522454150522474+5'-UTR,intron-Distal,intron-Proximal4.4765710.65187K562DDX24
chr1150522426150522463+5'-UTR,intron-Proximal3.9697920.71166K562AQR
chr1150522449150522492+5'-UTR,intron-Distal,intron-Proximal3.236094.43672K562XRN2
chr1150522300150522320+5'-UTR3.569254.30624HepG2SUB1
chr1150522490150522516+5'-UTR,intron-Distal3.2218310.82874K562AQR
chr1150522435150522453+5'-UTR,intron-Proximal3.467597.17953K562RBM15
chr1150522408150522421+5'-UTR,intron-Proximal4.8957952.49584K562AQR
chr1150522374150522408+5'-UTR,intron-Proximal5.1671856.33820K562AQR
chr1150521937150521973+5'-UTR3.1563612.64180K562UCHL5
chr1150521974150521991+5'-UTR,intron-Proximal3.9206920.31650K562AQR
chr1150521934150522119+5'-UTR,intron-Distal,intron-Proximal5.641798.08771HepG2EFTUD2
chr1150522661150522667+5'-UTR,intron-Distal3.171313.34231K562RBM15
chr1150522352150522414+5'-UTR,intron-Proximal3.1629819.58746K562SF3B4
chr1150522350150522403+5'-UTR,intron-Proximal4.0806824.66043K562DDX24
chr1150521955150521972+5'-UTR3.6176710.52099K562DDX24
chr1150521894150521978+5'-UTR,intron-Proximal4.2038823.82200K562DDX3X
chr1150522441150522482+5'-UTR,intron-Distal,intron-Proximal3.7576118.95928K562BUD13
chr1150522300150522316+5'-UTR3.239576.05977K562UCHL5
chr1150522297150522317+5'-UTR,intron-Proximal3.236547.11857K562GEMIN5
chr1150522586150522650+5'-UTR,intron-Distal3.7272618.34024K562AQR
chr1150522431150522527+5'-UTR,intron-Distal,intron-Proximal4.3555550.23287K562EFTUD2
chr1150522616150522654+5'-UTR,intron-Distal4.2320920.86126K562EFTUD2
chr1150522466150522502+5'-UTR,intron-Distal,intron-Proximal3.9950721.33674K562SF3B4
chr1150522463150522490+5'-UTR,intron-Distal,intron-Proximal4.8490021.33558K562AQR
chr1150522370150522374+5'-UTR,intron-Proximal5.7615049.34223K562AQR
chr1150522551150522588+5'-UTR,intron-Distal3.5686216.85158K562EFTUD2
chr1150521955150521973+5'-UTR3.170006.10047K562GEMIN5
chr1150523118150523150+CDS,intron-Distal4.554817.79386K562SMNDC1
chr1150523067150523130+CDS,intron-Distal,intron-Proximal3.3197034.61357K562BUD13
chr1150523335150523357+CDS,intron-Distal3.2846912.15545K562SF3B4
chr1150523062150523113+CDS,intron-Distal,intron-Proximal4.2073421.40234K562AQR
chr1150523160150523194+CDS,intron-Distal3.1865215.06440K562EFTUD2
chr1150523154150523164+CDS,intron-Distal3.4372312.30615K562SF3B4
chr1150523476150523496+CDS,intron-Distal3.0652912.77721K562DDX24
chr1150523037150523102+CDS,intron-Distal,intron-Proximal3.8005910.37647K562SMNDC1
chr1150523033150523126+CDS,intron-Distal,intron-Proximal3.7243520.61161K562GPKOW
chr1150523058150523128+CDS,intron-Distal,intron-Proximal5.75755400.00000K562SF3B4
chr1150523022150523119+CDS,intron-Distal,intron-Proximal4.5945449.24806K562EFTUD2
chr1150522840150522913+intron-Distal,intron-Proximal3.0414712.18841K562PRPF8
chr1150522959150522993+intron-Distal,intron-Proximal4.9607522.71150K562SF3B4
chr1150522848150522895+intron-Distal,intron-Proximal4.046233.60936K562FUS
chr1150522143150522265+intron-Distal,intron-Proximal5.203835.05197K562HNRNPK
chr1150522837150522906+intron-Distal,intron-Proximal3.8480450.80099K562SF3B4
chr1150522840150522898+intron-Distal,intron-Proximal3.079355.68603K562XRN2
chr1150522835150522907+intron-Distal,intron-Proximal4.2544380.03059K562EFTUD2
chr1150522954150522992+intron-Distal,intron-Proximal4.1338615.60270K562EFTUD2
chr1150522004150522112+intron-Distal,intron-Proximal5.366317.37220K562HNRNPK
chr1150522039150522102+intron-Distal,intron-Proximal3.5363526.19871K562EFTUD2
chr1150522839150522900+intron-Distal,intron-Proximal4.080955.72723HepG2EFTUD2
chr1150522162150522205+intron-Distal,intron-Proximal3.062648.89904K562PRPF8
chr1150521991150522017+intron-Proximal3.8333721.25836K562AQR
chr1150523021150523032+intron-Distal,intron-Proximal4.3674318.09000K562SF3B4
chr1150522262150522294+intron-Proximal5.5625713.75908K562AQR
chr1150523032150523058+intron-Distal,intron-Proximal6.4958679.40995K562SF3B4
chr1150523043150523072+intron-Distal,intron-Proximal3.709293.64169K562XRN2
chr1150523041150523067+intron-Distal,intron-Proximal3.2242013.45985K562BUD13
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AL356356.1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AL356356.1 is not available on ENCORE database.

  • 65 RBPs can affect the levels of AL356356.1.  








The Knockdown/knockout RNA-Seq assay for AL356356.1 is not available on ENCORE database.





65 RBPs can affect the gene expression of AL356356.1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AL356356.1ENSG00000225996.25.3147025.96180-2.288302.695702.17070HepG2AKAP1
AL356356.1ENSG00000225996.21.0148021.48110-4.403804.719403.70610HepG2ASCC1
AL356356.1ENSG00000225996.216.794102.690002.642202.522401.86040HepG2CPSF6
AL356356.1ENSG00000225996.23.9705024.45440-2.622703.754102.51980HepG2CSTF2
AL356356.1ENSG00000225996.29.4331049.46190-2.390504.350603.57720HepG2CELF1
AL356356.1ENSG00000225996.20.0000040.60510-99999.9999912.090109.93880HepG2DDX1
AL356356.1ENSG00000225996.272.1069033.294201.114802.917802.22300HepG2DDX21
AL356356.1ENSG00000225996.24.5715032.68040-2.837702.590901.70950HepG2DDX24
AL356356.1ENSG00000225996.218.043900.0000099999.999905.040403.32180HepG2DDX47
AL356356.1ENSG00000225996.27.0376038.94950-2.468504.226803.29250HepG2DDX55
AL356356.1ENSG00000225996.20.5445039.81510-6.1923011.219809.88270HepG2DNAJC21
AL356356.1ENSG00000225996.218.5025039.46610-1.092901.938601.37510HepG2DNAJC2
AL356356.1ENSG00000225996.27.0707031.09470-2.136704.389203.27010HepG2EIF3D
AL356356.1ENSG00000225996.211.4673056.67980-2.305303.579002.90880HepG2ETF1
AL356356.1ENSG00000225996.27.3495032.32680-2.137003.512002.25470HepG2GRSF1
AL356356.1ENSG00000225996.217.4965044.71210-1.353602.271201.63720HepG2HNRNPC
AL356356.1ENSG00000225996.20.0000021.51080-99999.999995.959204.96420HepG2HNRNPK
AL356356.1ENSG00000225996.29.2114048.46520-2.395504.106803.29800HepG2HNRNPL
AL356356.1ENSG00000225996.253.511300.0000099999.999908.004505.95970HepG2HSPD1
AL356356.1ENSG00000225996.236.268700.0000099999.9999011.538309.10730HepG2NAA15
AL356356.1ENSG00000225996.20.0000023.57820-99999.999997.058406.06940HepG2NCBP2
AL356356.1ENSG00000225996.27.0799043.96350-2.634506.245805.05120HepG2PARN
AL356356.1ENSG00000225996.28.951200.0000099999.999902.775502.00120HepG2PRPF4
AL356356.1ENSG00000225996.22.2612022.01330-3.283202.164301.60000HepG2QKI
AL356356.1ENSG00000225996.21.6932024.94660-3.881004.322503.45130HepG2RAVER1
AL356356.1ENSG00000225996.28.3133047.37380-2.510605.446804.78140HepG2RBM22
AL356356.1ENSG00000225996.23.3159030.25370-3.189605.107704.30250HepG2RPS19
AL356356.1ENSG00000225996.28.6822029.69560-1.774102.444501.70150HepG2RRP9
AL356356.1ENSG00000225996.20.0000030.36880-99999.9999910.089108.34030HepG2SERBP1
AL356356.1ENSG00000225996.222.5058053.50690-1.249402.606402.11440HepG2SRFBP1
AL356356.1ENSG00000225996.213.1286049.70870-1.920802.330001.74980HepG2SRSF5
AL356356.1ENSG00000225996.227.777500.0000099999.999908.188106.16000HepG2SSRP1
AL356356.1ENSG00000225996.211.8932043.54480-1.872402.033901.53610HepG2TRIM56
AL356356.1ENSG00000225996.210.347900.0000099999.999903.142102.43410HepG2ZC3H8
AL356356.1ENSG00000225996.2439.57280982.73280-1.160706.628604.70030K562CIRBP
AL356356.1ENSG00000225996.2504.7032031.725103.9916026.1430022.08830K562CPSF7
AL356356.1ENSG00000225996.2426.443602.124407.6491068.6195064.55330K562DDX28
AL356356.1ENSG00000225996.2725.788402.153108.3969016.8289013.35650K562DDX51
AL356356.1ENSG00000225996.2701.138602.043008.4228074.3615069.98900K562DDX52
AL356356.1ENSG00000225996.2550.168002.069408.054407.778405.68260K562EEF2
AL356356.1ENSG00000225996.2431.722002.003307.751505.479204.16750K562EFTUD2
AL356356.1ENSG00000225996.2422.248802.151607.6165085.8949081.81760K562EIF3D
AL356356.1ENSG00000225996.2333.4325032.344603.3657027.1663023.11490K562EIF4G1
AL356356.1ENSG00000225996.2366.5873087.506202.066603.381601.88240K562FUS
AL356356.1ENSG00000225996.232.13000631.25100-4.296202.795002.18720K562FXR1
AL356356.1ENSG00000225996.2449.199602.007807.8055096.8532092.47480K562GEMIN5
AL356356.1ENSG00000225996.2184.01210915.60230-2.314904.023002.49560K562HNRNPK
AL356356.1ENSG00000225996.2630.92270933.09810-0.564602.682301.51430K562IGF2BP3
AL356356.1ENSG00000225996.2501.3197031.054404.012804.553102.63300K562ILF3
AL356356.1ENSG00000225996.2495.35590963.68190-0.960103.188502.28320K562MAGOH
AL356356.1ENSG00000225996.2226.549000.0000099999.9999062.1387057.72200K562NOL12
AL356356.1ENSG00000225996.227.15360942.35830-5.1171039.5740035.50170K562PCBP1
AL356356.1ENSG00000225996.2588.288400.0000099999.9999085.7146082.20110K562PNPT1
AL356356.1ENSG00000225996.2359.170000.0000099999.999906.990805.69120K562PUF60
AL356356.1ENSG00000225996.2405.589400.0000099999.999902.884301.79460K562PUM1
AL356356.1ENSG00000225996.2593.8542031.596704.2322011.177807.82050K562QKI
AL356356.1ENSG00000225996.2430.8301031.742003.7626020.9207017.04900K562RBFOX2
AL356356.1ENSG00000225996.2538.53210944.48270-0.810504.843103.35060K562NELFE
AL356356.1ENSG00000225996.2425.7668097.415302.127704.106102.19000K562RPS10
AL356356.1ENSG00000225996.2302.1279029.384103.362006.945705.55140K562SF3B4
AL356356.1ENSG00000225996.2325.0899032.650503.315607.243405.21400K562SLBP
AL356356.1ENSG00000225996.2276.71000918.00630-1.7301012.4692010.96580K562SRSF1
AL356356.1ENSG00000225996.2236.913500.0000099999.999903.236301.96430K562SRSF7
AL356356.1ENSG00000225996.2285.924701.723007.3744018.6772015.21470K562TFIP11
AL356356.1ENSG00000225996.2626.991200.0000099999.99990151.61970147.22360K562TUFM
AL356356.1ENSG00000225996.2462.4186028.241404.033208.168306.77430K562U2AF2
AL356356.1ENSG00000225996.2414.419102.002307.6932017.3433014.80620K562UCHL5
AL356356.1ENSG00000225996.2279.952002.032107.105905.748203.78730K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AL356356.1 is not available on ENCORE database.





2 RBPs can affect the splicing of AL356356.1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A5SSAL356356.1ENSG00000225996.2chr1+150522297150522752150522297150522371150523090150524367-0.082000.006890.09380shorterK562AQR
MXEAL356356.1ENSG00000225996.2chr1+1505222971505223711505225881505227521505218961505219751505230901505243670.206000.000000.000181includedK562PUS1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for AL356356.1 is not avaliable on ENCORE database.