ZNF384

General Information

Gene Name : ZNF384
Gene ID : ENSG00000126746.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ZNF384)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ZNF384	ENSG00000126746.17	41.17	55.46	48.31	ENCSR000AEF
HepG2	ZNF384	ENSG00000126746.17	48.01	37.76	42.88	ENCSR985KAT
K562	ZNF384	ENSG00000126746.17	44.87	43.58	44.22	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ZNF384 is not avaliable on ENCORE database.

Proteins bound to RNA

ZNF384 RNA is bound by 20 proteins.

eCLIP assay for ZNF384 is not avaliable on ENCORE database.

20 proteins are bound to ZNF384 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	6776484	6776582	-	3'-UTR,intron-Distal	3.87548	4.39142	HepG2	PCBP2
chr12	6776438	6776548	-	3'-UTR,intron-Distal	4.81000	5.84761	K562	FAM120A
chr12	6797385	6797451	-	5'-UTR,intron-Distal,intron-Proximal	5.12977	16.10260	HepG2	SF3B4
chr12	6798039	6798088	-	5'-UTR,intron-Distal,intron-Proximal	4.84809	14.76135	HepG2	PRPF4
chr12	6797998	6798107	-	5'-UTR,intron-Distal,intron-Proximal	5.12168	8.23441	K562	GTF2F1
chr12	6797832	6797937	-	5'-UTR,intron-Distal,intron-Proximal	4.83964	8.13169	HepG2	PRPF4
chr12	6797848	6797956	-	5'-UTR,intron-Distal,intron-Proximal	3.95110	3.81373	HepG2	DROSHA
chr12	6797973	6798075	-	5'-UTR,intron-Distal,intron-Proximal	3.23400	3.73797	K562	CSTF2T
chr12	6797331	6797398	-	5'-UTR,intron-Distal,intron-Proximal	3.08872	3.99259	HepG2	PPIG
chr12	6797970	6798039	-	5'-UTR,intron-Distal,intron-Proximal	3.74536	10.63195	HepG2	PRPF4
chr12	6797960	6798093	-	5'-UTR,intron-Distal,intron-Proximal	4.05406	8.45395	HepG2	NCBP2
chr12	6798022	6798082	-	5'-UTR,intron-Distal,intron-Proximal	4.11421	7.45939	HepG2	GTF2F1
chr12	6787384	6787434	-	CDS,intron-Distal,intron-Proximal	3.09887	3.02345	K562	ZNF622
chr12	6787381	6787442	-	CDS,intron-Distal,intron-Proximal	3.31796	6.70384	HepG2	PPIG
chr12	6788066	6788170	-	CDS,intron-Distal,intron-Proximal	3.55185	7.75193	HepG2	GRWD1
chr12	6782517	6782586	-	CDS,intron-Distal,intron-Proximal	3.35418	4.08171	K562	YBX3
chr12	6782378	6782427	-	CDS,intron-Distal,intron-Proximal	3.21035	3.63043	HepG2	GRWD1
chr12	6782573	6782655	-	CDS,intron-Distal,intron-Proximal	4.96943	4.90235	K562	SF3B4
chr12	6788616	6788662	-	CDS,intron-Distal,intron-Proximal	3.48523	3.05161	HepG2	PPIG
chr12	6787250	6787321	-	CDS,intron-Distal,intron-Proximal	3.30004	4.22621	HepG2	PRPF8
chr12	6782380	6782425	-	CDS,intron-Distal,intron-Proximal	4.21006	3.06406	HepG2	IGF2BP1
chr12	6787386	6787472	-	CDS,intron-Distal,intron-Proximal	4.49404	4.72880	HepG2	GRWD1
chr12	6777266	6777329	-	CDS,intron-Distal	3.47028	3.32861	HepG2	U2AF2
chr12	6778324	6778369	-	CDS,intron-Distal,intron-Proximal	3.45874	4.18806	HepG2	U2AF2
chr12	6787286	6787348	-	CDS,intron-Distal,intron-Proximal	4.06436	8.74774	HepG2	PPIG
chr12	6779882	6779953	-	CDS,intron-Distal,intron-Proximal	3.11199	6.74002	HepG2	PRPF8
chr12	6787484	6787530	-	CDS,intron-Distal,intron-Proximal	3.58915	4.65237	HepG2	U2AF2
chr12	6778318	6778378	-	CDS,intron-Distal,intron-Proximal	3.69413	4.77019	K562	BUD13
chr12	6788108	6788150	-	CDS,intron-Distal,intron-Proximal	3.43894	5.58370	HepG2	PPIG
chr12	6788008	6788149	-	CDS,intron-Distal,intron-Proximal	4.46956	11.40635	HepG2	PRPF8
chr12	6787588	6787656	-	CDS,intron-Distal,intron-Proximal	4.42441	6.01372	K562	AQR
chr12	6788578	6788623	-	CDS,intron-Distal,intron-Proximal	5.11860	6.22530	K562	AQR
chr12	6787291	6787384	-	CDS,intron-Distal,intron-Proximal	3.66750	9.28015	HepG2	GRWD1
chr12	6779875	6779935	-	CDS,intron-Distal,intron-Proximal	3.32312	3.78727	K562	PRPF8
chr12	6796281	6796368	-	intron-Distal	4.20480	4.31871	HepG2	HNRNPM
chr12	6782340	6782354	-	intron-Distal,intron-Proximal	5.56086	8.03507	K562	AQR
chr12	6784786	6784882	-	intron-Distal	4.93887	10.82244	HepG2	XPO5
chr12	6796266	6796326	-	intron-Distal	3.96094	3.78162	K562	HNRNPM
chr12	6782374	6782381	-	intron-Distal,intron-Proximal	5.31211	6.04760	K562	AQR
chr12	6781780	6781828	-	intron-Distal,intron-Proximal	4.00459	3.28989	K562	RBM15
chr12	6782354	6782374	-	intron-Distal,intron-Proximal	5.49660	7.63570	K562	AQR
chr12	6787785	6787825	-	intron-Distal,intron-Proximal	3.89579	4.52312	K562	AQR
chr12	6779879	6779926	-	intron-Distal,intron-Proximal	4.46454	7.15298	K562	AQR
chr12	6788061	6788111	-	intron-Distal,intron-Proximal	4.06086	4.98250	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for ZNF384 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ZNF384 is not available on ENCORE database.
39 RBPs can affect the levels of ZNF384.

The Knockdown/knockout RNA-Seq assay for ZNF384 is not available on ENCORE database.

39 RBPs can affect the gene expression of ZNF384 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ZNF384	ENSG00000126746.13	592.60230	1218.75920	-1.04030	12.23300	11.19340	HepG2	AKAP1
ZNF384	ENSG00000126746.13	1275.50180	971.99490	0.39190	5.96740	5.05880	HepG2	CKAP4
ZNF384	ENSG00000126746.13	850.03680	1167.48030	-0.45780	3.37750	2.69550	HepG2	DDX3X
ZNF384	ENSG00000126746.13	648.10880	857.83970	-0.40450	2.40990	1.68290	HepG2	DDX55
ZNF384	ENSG00000126746.13	593.26790	1002.88700	-0.75740	6.79390	5.86030	HepG2	DDX6
ZNF384	ENSG00000126746.13	988.84990	1277.01740	-0.36900	4.27960	3.28150	HepG2	EIF4G1
ZNF384	ENSG00000126746.13	1924.69300	1524.89630	0.33580	4.60460	3.86470	HepG2	ETF1
ZNF384	ENSG00000126746.13	841.77400	641.78990	0.39120	2.59400	1.73130	HepG2	GEMIN5
ZNF384	ENSG00000126746.13	1029.44970	777.72520	0.40440	2.40850	1.46280	HepG2	GNB2L1
ZNF384	ENSG00000126746.13	718.62690	910.84520	-0.34200	3.49830	2.82450	HepG2	HNRNPU
ZNF384	ENSG00000126746.13	1344.45200	1090.94550	0.30130	3.31320	2.47360	HepG2	PRPF4
ZNF384	ENSG00000126746.13	931.26060	1102.35830	-0.24330	1.84890	1.32310	HepG2	QKI
ZNF384	ENSG00000126746.13	1633.92760	1274.53150	0.35830	4.42580	3.81050	HepG2	RBM22
ZNF384	ENSG00000126746.13	2152.19270	1558.67370	0.46540	2.58070	1.92880	HepG2	SF3A3
ZNF384	ENSG00000126746.13	1608.54800	1249.85990	0.36390	5.35960	4.69250	HepG2	SSB
ZNF384	ENSG00000126746.13	624.98670	853.93390	-0.45030	2.90660	2.21590	HepG2	SUPV3L1
ZNF384	ENSG00000126746.13	1907.72370	1260.59550	0.59760	2.54190	1.51520	HepG2	TBRG4
ZNF384	ENSG00000126746.13	1875.00080	1262.04680	0.57100	6.38790	5.45100	HepG2	U2AF1
ZNF384	ENSG00000126746.13	1513.71910	773.30010	0.96890	3.04540	2.00810	HepG2	U2AF2
ZNF384	ENSG00000126746.13	850.25590	1076.64350	-0.34060	4.15510	3.35680	HepG2	ZC3H8
ZNF384	ENSG00000126746.13	3213.38880	1398.05480	1.20060	29.68100	27.96150	K562	AQR
ZNF384	ENSG00000126746.13	1048.34410	787.49900	0.41270	3.18510	2.20080	K562	EFTUD2
ZNF384	ENSG00000126746.13	750.27650	550.43280	0.44680	4.17370	3.20390	K562	EIF3G
ZNF384	ENSG00000126746.13	1142.22340	683.59540	0.74050	9.51990	7.98820	K562	EIF4A3
ZNF384	ENSG00000126746.13	872.56580	710.90430	0.29550	2.28680	1.72800	K562	FXR1
ZNF384	ENSG00000126746.13	1204.79760	1551.50930	-0.36490	3.13470	2.33190	K562	GRSF1
ZNF384	ENSG00000126746.13	1137.92300	867.57970	0.39120	3.38290	2.73220	K562	HNRNPC
ZNF384	ENSG00000126746.13	1101.04760	840.30810	0.38980	3.19840	1.67880	K562	LARP7
ZNF384	ENSG00000126746.13	984.30270	798.94910	0.30090	2.16670	1.41840	K562	MAGOH
ZNF384	ENSG00000126746.13	1108.67970	847.07070	0.38820	3.19670	1.64670	K562	PHF6
ZNF384	ENSG00000126746.13	1203.72030	766.32680	0.65140	6.89420	5.70900	K562	PRPF8
ZNF384	ENSG00000126746.13	926.35240	744.21980	0.31570	2.10360	1.37490	K562	RBM22
ZNF384	ENSG00000126746.13	923.26930	709.80150	0.37920	3.09620	2.04040	K562	RCC2
ZNF384	ENSG00000126746.13	1324.86040	1057.75160	0.32470	2.60430	1.55680	K562	SAFB
ZNF384	ENSG00000126746.13	873.15520	576.74180	0.59820	5.72520	4.46540	K562	SF3B4
ZNF384	ENSG00000126746.13	910.80390	672.86500	0.43670	3.42340	2.25110	K562	SRFBP1
ZNF384	ENSG00000126746.13	909.30640	710.93610	0.35490	2.54350	1.54060	K562	SRSF4
ZNF384	ENSG00000126746.13	1458.32590	1190.62930	0.29250	2.56540	1.77660	K562	SYNCRIP
ZNF384	ENSG00000126746.13	976.82900	770.13410	0.34290	2.26800	1.62340	K562	TARDBP
ZNF384	ENSG00000126746.13	1012.76380	794.94270	0.34930	2.57930	1.67260	K562	TRIM56
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ZNF384 is not available on ENCORE database.

28 RBPs can affect the splicing of ZNF384 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ZNF384	ENSG00000126746.13	chr12	-	6786332	6786425			6782381	6782606	6787292	6787626	-0.11400	0.00001	0.00023	excluded	K562	SRSF1
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.37000	0.00001	0.00043	excluded	K562	SF3B4
SE	ZNF384	ENSG00000126746.13	chr12	-	6786332	6786425			6782381	6782606	6787292	6787626	-0.06800	0.00418	0.06458	excluded	K562	SF3B4
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.36700	0.00000	0.00038	excluded	K562	PRPF8
SE	ZNF384	ENSG00000126746.13	chr12	-	6781515	6781698			6779925	6780004	6782381	6782606	-0.14900	0.00000	0.00022	excluded	K562	PRPF8
SE	ZNF384	ENSG00000126746.13	chr12	-	6786332	6786425			6782381	6782606	6787292	6787626	-0.09400	0.00052	0.02257	excluded	K562	PRPF8
SE	ZNF384	ENSG00000126746.13	chr12	-	6786332	6786425			6782381	6782606	6787292	6787626	-0.09700	0.00034	0.02619	excluded	HepG2	RBM22
SE	ZNF384	ENSG00000126746.13	chr12	-	6785952	6786017			6782225	6782606	6786332	6786425	0.39100	0.00081	0.01731	included	HepG2	U2AF1
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.37400	0.00000	0.00000	excluded	HepG2	U2AF1
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.32400	0.00006	0.00923	excluded	HepG2	PRPF8
SE	ZNF384	ENSG00000126746.13	chr12	-	6781515	6781698			6779925	6780004	6782381	6782606	-0.19800	0.00011	0.01440	excluded	HepG2	PRPF8
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.23500	0.00011	0.00570	excluded	K562	AKAP8L
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.30000	0.00001	0.00194	excluded	HepG2	HNRNPM
SE	ZNF384	ENSG00000126746.13	chr12	-	6781515	6781698			6779925	6780004	6782381	6782606	-0.16300	0.00046	0.01409	excluded	HepG2	HNRNPK
SE	ZNF384	ENSG00000126746.13	chr12	-	6786332	6786425			6782381	6782606	6787292	6787626	0.05600	0.00001	0.00320	included	HepG2	DDX59
SE	ZNF384	ENSG00000126746.13	chr12	-	6781515	6781698			6779925	6780004	6782381	6782606	0.14600	0.00073	0.05770	included	HepG2	TBRG4
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.54600	0.00000	0.00002	excluded	HepG2	U2AF2
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.33000	0.00000	0.00000	excluded	K562	AQR
SE	ZNF384	ENSG00000126746.13	chr12	-	6786332	6786425			6782381	6782606	6787292	6787530	-0.05100	0.00077	0.00981	excluded	K562	AQR
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.25400	0.00338	0.09690	excluded	K562	FXR1
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.28700	0.00010	0.00234	excluded	K562	PUS1
SE	ZNF384	ENSG00000126746.13	chr12	-	6781515	6781698			6779925	6780004	6782381	6782606	-0.11300	0.00007	0.00181	excluded	K562	PUS1
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787967			6787366	6787626	6788111	6788349	-0.27000	0.00150	0.07514	excluded	HepG2	NCBP2
SE	ZNF384	ENSG00000126746.13	chr12	-	6781515	6781698			6779925	6780004	6782381	6782606	0.23300	0.00002	0.04496	included	K562	DHX30
SE	ZNF384	ENSG00000126746.13	chr12	-	6786332	6786425			6782381	6782606	6787292	6787626	-0.05100	0.00016	0.03323	excluded	K562	NSUN2
SE	ZNF384	ENSG00000126746.13	chr12	-	6781515	6781698			6779925	6780004	6782381	6782606	0.23800	0.00000	0.00029	included	HepG2	HNRNPA1
SE	ZNF384	ENSG00000126746.13	chr12	-	6781515	6781698			6779925	6780004	6782381	6782606	-0.14500	0.00000	0.00044	excluded	K562	EFTUD2
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.22300	0.00049	0.05417	excluded	HepG2	LARP4
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	0.23000	0.00004	0.01237	included	HepG2	RBM15
SE	ZNF384	ENSG00000126746.13	chr12	-	6781515	6781698			6779925	6780004	6782381	6782606	0.26800	0.00008	0.00312	included	HepG2	SRSF1
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.29400	0.00001	0.00051	excluded	HepG2	SRSF1
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.21600	0.00166	0.06897	excluded	HepG2	SF3B4
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.21200	0.00020	0.00997	excluded	K562	UTP18
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.20700	0.00038	0.01269	excluded	K562	RBM15
SE	ZNF384	ENSG00000126746.13	chr12	-	6781515	6781698			6779925	6780004	6782381	6782606	-0.09200	0.00097	0.02671	excluded	K562	RBM15
SE	ZNF384	ENSG00000126746.13	chr12	-	6781515	6781698			6779925	6780004	6782381	6782606	-0.08400	0.00225	0.05168	excluded	K562	AGGF1
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.30800	0.00001	0.00092	excluded	K562	SF3B1
SE	ZNF384	ENSG00000126746.13	chr12	-	6781515	6781698			6779925	6780004	6782381	6782606	0.23800	0.00000	0.00008	included	HepG2	HNRNPU
SE	ZNF384	ENSG00000126746.13	chr12	-	6786332	6786425			6782381	6782606	6787292	6787626	0.13200	0.00014	0.00907	included	HepG2	HNRNPU
SE	ZNF384	ENSG00000126746.13	chr12	-	6781515	6781698			6779925	6780004	6782381	6782606	0.18900	0.00005	0.00363	included	HepG2	HNRNPC
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.32300	0.00007	0.00447	excluded	HepG2	HNRNPC
SE	ZNF384	ENSG00000126746.13	chr12	-	6785952	6786017			6782225	6782606	6787292	6787708	0.13200	0.00005	0.01947	included	HepG2	FUS
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.24800	0.00008	0.02357	excluded	HepG2	PRPF4
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876			6787292	6787626	6788111	6788349	-0.33200	0.00000	0.00000	excluded	K562	HNRNPC
SE	ZNF384	ENSG00000126746.13	chr12	-	6786332	6786425			6782381	6782606	6787292	6787626	-0.06900	0.00006	0.00181	excluded	K562	HNRNPC
A3SS	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787985			6787828	6787876	6788111	6788349	0.28300	0.00000	0.00000	longer	K562	AQR
MXE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876	6788111	6788349	6787292	6787626	6788620	6788691	0.18800	0.00016	0.00534	1included	K562	PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ZNF384

General Information

Functions

Localization

Domains (AlphaFold: ZNF384)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ZNF384 is not avaliable on ENCORE database.

20 proteins are bound to ZNF384 RNA:

eCLIP assay for ZNF384 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ZNF384 is not available on ENCORE database.

39 RBPs can affect the gene expression of ZNF384 :

The Knockdown/knockout RNA-Seq assay for ZNF384 is not available on ENCORE database.

28 RBPs can affect the splicing of ZNF384 :

The Knockdown/knockout RNA-Seq assay for ZNF384 is not avaliable on ENCORE database.