ZDHHC21

General Information

Gene Name       : ZDHHC21
Gene ID             : ENSG00000175893.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZDHHC21)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZDHHC21ENSG00000175893.119.237.378.30ENCSR000AEF
HepG2ZDHHC21ENSG00000175893.111.223.642.43ENCSR985KAT
K562ZDHHC21ENSG00000175893.110.520.670.59ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZDHHC21 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZDHHC21 RNA is bound by 8 proteins.  







eCLIP assay for ZDHHC21 is not avaliable on ENCORE database.





8 proteins are bound to ZDHHC21 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr91461681914616906-3'-UTR,intron-Distal3.275685.60662HepG2PCBP2
chr91467434214674403-5'-UTR,intron-Distal,intron-Proximal4.164806.98930HepG2U2AF2
chr91466221214662294-CDS,intron-Distal,intron-Proximal3.606215.86107HepG2PPIG
chr91467420214674245-CDS,intron-Distal3.991343.06595HepG2BCLAF1
chr91467281914672917-CDS,intron-Distal,intron-Proximal3.741304.93978HepG2BCLAF1
chr91466221214662330-CDS,intron-Distal,intron-Proximal3.653765.97823HepG2BCLAF1
chr91463993514640018-CDS,intron-Distal,intron-Proximal4.908865.95026HepG2U2AF2
chr91465834814658451-intron-Distal6.2426215.78113HepG2QKI
chr91467563314675703-intron-Distal3.496963.51714HepG2QKI
chr91467572414675786-intron-Distal5.8406510.79727HepG2QKI
chr91465492614655012-intron-Distal3.551284.60009HepG2SUGP2
chr91463446414634520-intron-Distal3.958653.27946HepG2HNRNPM
chr91465470914654787-intron-Distal4.8367520.88239HepG2QKI
chr91463443314634504-intron-Distal4.123654.10336HepG2SUGP2
chr91465406114654150-intron-Distal4.801125.02084HepG2HNRNPM
chr91467595314675994-intron-Distal4.745035.85495HepG2QKI
chr91465834414658441-intron-Distal5.332385.97591K562QKI
chr91467599414676076-intron-Distal5.5892812.57135HepG2QKI
chr91465470614654785-intron-Distal4.602046.10779K562QKI
chr91467579514675863-intron-Distal4.4947715.35029HepG2QKI
chr91463443614634567-intron-Distal4.264973.20480HepG2EXOSC5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZDHHC21 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZDHHC21 is not available on ENCORE database.

  • 58 RBPs can affect the levels of ZDHHC21.  








The Knockdown/knockout RNA-Seq assay for ZDHHC21 is not available on ENCORE database.





58 RBPs can affect the gene expression of ZDHHC21 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZDHHC21ENSG00000175893.7950.88600408.115501.2202011.0317010.03820HepG2AKAP1
ZDHHC21ENSG00000175893.7440.54470290.590000.600203.818802.18170HepG2ATP5C1
ZDHHC21ENSG00000175893.7274.09310434.03980-0.663202.489001.60260HepG2BCCIP
ZDHHC21ENSG00000175893.7502.33430377.213600.413202.569501.70220HepG2BCLAF1
ZDHHC21ENSG00000175893.7356.79090591.19760-0.7286010.390309.09580HepG2DAZAP1
ZDHHC21ENSG00000175893.7264.50210390.96030-0.563702.914202.27410HepG2DDX3X
ZDHHC21ENSG00000175893.7978.84160690.876700.502506.326305.47920HepG2ETF1
ZDHHC21ENSG00000175893.7543.54510325.162500.741103.690802.80990HepG2FIP1L1
ZDHHC21ENSG00000175893.7267.76260153.803300.799804.776503.75960HepG2FUBP3
ZDHHC21ENSG00000175893.7510.41680333.937500.612003.993903.20260HepG2G3BP1
ZDHHC21ENSG00000175893.7237.44180469.21070-0.982703.468702.75820HepG2GPKOW
ZDHHC21ENSG00000175893.7254.67370398.64370-0.646403.253302.48100HepG2HNRNPF
ZDHHC21ENSG00000175893.7354.70570538.55800-0.602507.000905.97410HepG2HNRNPL
ZDHHC21ENSG00000175893.7252.07430392.54590-0.639004.422903.52550HepG2IGF2BP1
ZDHHC21ENSG00000175893.7233.91960339.45070-0.537202.640001.97850HepG2IGF2BP2
ZDHHC21ENSG00000175893.7506.23600341.409700.568203.003201.95250HepG2KHSRP
ZDHHC21ENSG00000175893.7193.11990362.10140-0.906905.745504.86240HepG2MATR3
ZDHHC21ENSG00000175893.7244.09150396.98570-0.701701.978501.34080HepG2NSUN2
ZDHHC21ENSG00000175893.7577.82890330.111900.807605.019204.05860HepG2PABPC4
ZDHHC21ENSG00000175893.7533.25860292.490000.8663011.4368010.33930HepG2PCBP1
ZDHHC21ENSG00000175893.7245.24780326.31170-0.412002.279501.60370HepG2PPIL4
ZDHHC21ENSG00000175893.7490.38810329.365900.574104.081503.12400HepG2PRPF8
ZDHHC21ENSG00000175893.7552.85080297.641000.8932012.0326011.05070HepG2PTBP1
ZDHHC21ENSG00000175893.7428.97650559.58390-0.383502.465301.89840HepG2PUF60
ZDHHC21ENSG00000175893.7679.79200322.306801.0766016.1391014.80760HepG2QKI
ZDHHC21ENSG00000175893.7743.92130429.237700.793304.414403.53480HepG2RAVER1
ZDHHC21ENSG00000175893.7797.71990292.531401.4472027.3030025.33960HepG2RBM25
ZDHHC21ENSG00000175893.7623.62520331.228000.9128012.4218011.43130HepG2NELFE
ZDHHC21ENSG00000175893.7321.35270429.50180-0.418502.575201.91260HepG2RPLP0
ZDHHC21ENSG00000175893.7499.23310325.829600.615504.259503.30660HepG2RRP9
ZDHHC21ENSG00000175893.7601.76800309.844200.9576013.6264012.46840HepG2SF3B4
ZDHHC21ENSG00000175893.7443.24520536.50470-0.275501.943801.33720HepG2SLBP
ZDHHC21ENSG00000175893.7725.18770493.171500.556202.335101.62020HepG2SNRNP70
ZDHHC21ENSG00000175893.71020.96760652.195000.6465010.694209.88300HepG2SRFBP1
ZDHHC21ENSG00000175893.7567.70920323.426000.811609.870309.10040HepG2SRSF1
ZDHHC21ENSG00000175893.7294.78190391.66920-0.410002.785902.08830HepG2SRSF7
ZDHHC21ENSG00000175893.7457.30980263.137800.797309.335008.42620HepG2SRSF9
ZDHHC21ENSG00000175893.7472.40920566.25120-0.261401.736101.30680HepG2SSB
ZDHHC21ENSG00000175893.7524.01920628.34530-0.261901.924901.38830HepG2SUCLG1
ZDHHC21ENSG00000175893.7149.05390219.56380-0.558802.467901.57670HepG2SUPT6H
ZDHHC21ENSG00000175893.7524.50700290.751500.851109.914108.95750HepG2TAF15
ZDHHC21ENSG00000175893.7367.73510267.114800.461102.855402.00660HepG2TIA1
ZDHHC21ENSG00000175893.7253.28010355.45960-0.489002.947902.43470HepG2TIAL1
ZDHHC21ENSG00000175893.7238.69000358.67670-0.587504.521203.83590HepG2TRIM56
ZDHHC21ENSG00000175893.7427.51850278.154400.620003.486302.78600HepG2U2AF1
ZDHHC21ENSG00000175893.7661.83480421.933200.649403.737302.25310HepG2XRCC5
ZDHHC21ENSG00000175893.7211.67420418.21100-0.982404.419603.51060HepG2XRN2
ZDHHC21ENSG00000175893.7281.65080380.59650-0.434403.106102.53670HepG2ZNF622
ZDHHC21ENSG00000175893.7132.83010188.20900-0.502801.834401.35290K562AGGF1
ZDHHC21ENSG00000175893.7137.00810195.84240-0.515401.873901.33170K562AKAP8L
ZDHHC21ENSG00000175893.7109.37610165.31800-0.595902.068601.54670K562AQR
ZDHHC21ENSG00000175893.7147.20130210.72540-0.517602.260801.48000K562DKC1
ZDHHC21ENSG00000175893.758.08380105.44010-0.860202.970902.12180K562EIF4A3
ZDHHC21ENSG00000175893.7173.53290101.969000.767001.906001.33190K562G3BP2
ZDHHC21ENSG00000175893.741.4731081.04580-0.966602.358901.50280K562HNRNPM
ZDHHC21ENSG00000175893.759.94360111.85610-0.900003.158102.27320K562PPIG
ZDHHC21ENSG00000175893.781.37120131.96420-0.697602.675402.02060K562PTBP1
ZDHHC21ENSG00000175893.771.94190126.56360-0.815003.096302.20240K562RBM22
ZDHHC21ENSG00000175893.7142.8590084.047700.765202.539401.75790K562RPS19
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZDHHC21 is not available on ENCORE database.





2 RBPs can affect the splicing of ZDHHC21 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZDHHC21ENSG00000175893.7chr9-146225381462268914619636146196801463989314640010-0.377000.000000.00002excludedHepG2AKAP1
SEZDHHC21ENSG00000175893.7chr9-146225381462268914619636146196801463989314640010-0.347000.000450.03764excludedHepG2IGF2BP3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZDHHC21 is not avaliable on ENCORE database.