WARS2

General Information

Gene Name       : WARS2
Gene ID             : ENSG00000116874.11
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: WARS2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878WARS2ENSG00000116874.1111.8610.9711.41ENCSR000AEF
HepG2WARS2ENSG00000116874.119.7911.4610.62ENCSR985KAT
K562WARS2ENSG00000116874.1111.3711.3711.37ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for WARS2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • WARS2 RNA is bound by 2 proteins.  







eCLIP assay for WARS2 is not avaliable on ENCORE database.





2 proteins are bound to WARS2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1119658744119658887-intron-Distal5.9313113.28301HepG2QKI
chr1119678294119678384-intron-Distal5.588107.91717K562PTBP1
chr1119678281119678386-intron-Distal5.464557.79427HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for WARS2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for WARS2 is not available on ENCORE database.

  • 68 RBPs can affect the levels of WARS2.  








The Knockdown/knockout RNA-Seq assay for WARS2 is not available on ENCORE database.





68 RBPs can affect the gene expression of WARS2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
WARS2ENSG00000116874.7495.84830753.75480-0.604204.001803.37920HepG2AKAP1
WARS2ENSG00000116874.7372.67220560.67150-0.589205.810104.87700HepG2AUH
WARS2ENSG00000116874.7195.05950300.20880-0.622102.673901.75490HepG2BCCIP
WARS2ENSG00000116874.7169.81130253.35970-0.577302.607102.02410HepG2BOP1
WARS2ENSG00000116874.7268.73680422.22520-0.651803.024502.22160HepG2CNOT7
WARS2ENSG00000116874.7342.31420460.10480-0.426603.417402.60940HepG2DAZAP1
WARS2ENSG00000116874.7429.95590722.06340-0.747906.438905.52570HepG2DDX3X
WARS2ENSG00000116874.7167.55160620.21240-1.8882025.8131024.21110HepG2DDX6
WARS2ENSG00000116874.7170.21700596.27980-1.8086025.6425023.97000HepG2EIF2S1
WARS2ENSG00000116874.7158.53160250.94600-0.662602.987502.05300HepG2EIF3D
WARS2ENSG00000116874.7313.99230641.56460-1.030908.157907.00750HepG2EIF4B
WARS2ENSG00000116874.7589.37920453.931900.376602.935802.07750HepG2EIF4G1
WARS2ENSG00000116874.7424.25830298.155900.508802.685101.60850HepG2ESF1
WARS2ENSG00000116874.7532.22460643.72780-0.274401.881501.36520HepG2ETF1
WARS2ENSG00000116874.7385.89290664.80900-0.784706.977805.91220HepG2FXR1
WARS2ENSG00000116874.7313.47540616.74990-0.976309.427908.23630HepG2G3BP1
WARS2ENSG00000116874.7263.28470390.84390-0.570002.601601.52590HepG2GRSF1
WARS2ENSG00000116874.7467.93510624.41710-0.416202.479701.81620HepG2HNRNPK
WARS2ENSG00000116874.7358.65700251.646300.511102.573401.96240HepG2HNRNPLL
WARS2ENSG00000116874.7339.54010626.92770-0.884708.158407.06250HepG2IGF2BP2
WARS2ENSG00000116874.7356.05670588.28440-0.724402.484301.55880HepG2IGF2BP3
WARS2ENSG00000116874.7238.29590306.64810-0.363802.022801.38470HepG2ILF2
WARS2ENSG00000116874.7287.60140425.60220-0.565402.665801.44420HepG2KRR1
WARS2ENSG00000116874.7358.39830665.04080-0.891908.395407.26710HepG2MAGOH
WARS2ENSG00000116874.7306.23510668.77590-1.1269011.5298010.30630HepG2MATR3
WARS2ENSG00000116874.7148.77290262.64030-0.820003.006301.90830HepG2METAP2
WARS2ENSG00000116874.7397.40810684.53990-0.784506.693605.72750HepG2NCBP2
WARS2ENSG00000116874.7242.81320403.63940-0.733204.032902.31550HepG2NKRF
WARS2ENSG00000116874.7342.58430456.23960-0.413302.669701.92050HepG2NOL12
WARS2ENSG00000116874.7293.50360609.67600-1.0547010.944809.53550HepG2PABPC4
WARS2ENSG00000116874.7421.50730606.40770-0.524705.425904.62280HepG2PCBP1
WARS2ENSG00000116874.7458.53450329.980900.474503.730302.84380HepG2PRPF4
WARS2ENSG00000116874.7318.41030617.02630-0.9544014.3519013.29720HepG2PTBP1
WARS2ENSG00000116874.7157.68050435.52390-1.4657017.8061016.47380HepG2PUF60
WARS2ENSG00000116874.7386.00930668.28940-0.791809.606908.54320HepG2QKI
WARS2ENSG00000116874.7456.14570606.50250-0.411002.870502.18600HepG2RBM25
WARS2ENSG00000116874.7378.74470686.70450-0.8585012.1434011.16270HepG2NELFE
WARS2ENSG00000116874.7502.89710639.54740-0.346802.710202.09950HepG2RECQL
WARS2ENSG00000116874.7145.10940244.17890-0.750804.134503.39850HepG2RPS19
WARS2ENSG00000116874.7208.44120324.98320-0.640703.604402.69460HepG2RPS2
WARS2ENSG00000116874.7264.82450423.90720-0.678703.781002.84580HepG2RPS3A
WARS2ENSG00000116874.7331.01850642.43320-0.9566014.2393013.05790HepG2SF3B4
WARS2ENSG00000116874.7210.60870311.77520-0.565903.936103.19130HepG2SMN1
WARS2ENSG00000116874.789.99720347.12360-1.9475011.484209.47260HepG2SMNDC1
WARS2ENSG00000116874.7473.06770670.54920-0.503305.019104.43130HepG2SRSF1
WARS2ENSG00000116874.7303.25270430.02100-0.503903.774403.06450HepG2SRSF5
WARS2ENSG00000116874.7391.49360545.51730-0.478604.518203.84510HepG2SRSF9
WARS2ENSG00000116874.7249.89110368.72840-0.561302.865701.74370HepG2STIP1
WARS2ENSG00000116874.7212.13440291.71860-0.459602.426501.95280HepG2TIAL1
WARS2ENSG00000116874.7183.44080294.30990-0.682005.072904.35570HepG2TRIM56
WARS2ENSG00000116874.7114.39160173.57950-0.601602.232901.55080HepG2UCHL5
WARS2ENSG00000116874.7229.19280338.80240-0.563904.032203.21360HepG2UPF1
WARS2ENSG00000116874.7264.16660372.61760-0.496203.769503.15720HepG2ZNF622
WARS2ENSG00000116874.7524.08350677.37330-0.370202.097901.57360K562AQR
WARS2ENSG00000116874.7223.56530313.51330-0.487802.242301.46210K562BOP1
WARS2ENSG00000116874.7343.43100458.29360-0.416302.696001.50330K562DDX21
WARS2ENSG00000116874.7284.91130395.83750-0.474403.201901.77150K562DDX6
WARS2ENSG00000116874.7269.04280428.84530-0.672606.352604.49100K562EIF2S1
WARS2ENSG00000116874.7570.47170407.895800.483903.461202.54720K562EIF4A3
WARS2ENSG00000116874.7366.45600491.19220-0.422602.474201.67380K562FIP1L1
WARS2ENSG00000116874.7222.72900339.19140-0.606803.330302.38710K562FMR1
WARS2ENSG00000116874.7251.02850408.12630-0.701205.043004.26000K562HNRNPC
WARS2ENSG00000116874.7263.66260364.47270-0.467102.426401.37140K562HNRNPF
WARS2ENSG00000116874.7618.95280483.678900.355702.388201.60480K562MAGOH
WARS2ENSG00000116874.7891.66320669.891500.412503.172802.18690K562MBNL1
WARS2ENSG00000116874.7212.80320403.87050-0.924406.950905.62980K562PCBP3
WARS2ENSG00000116874.7172.97290309.79740-0.840806.111604.92590K562POLR2G
WARS2ENSG00000116874.7208.54540365.93220-0.811205.387104.06910K562PSIP1
WARS2ENSG00000116874.7370.88590469.91350-0.341401.997601.41670K562PTBP1
WARS2ENSG00000116874.7625.88810858.35180-0.455703.184302.31080K562PUF60
WARS2ENSG00000116874.7310.11540474.23980-0.612804.421303.00410K562NELFE
WARS2ENSG00000116874.7254.36830482.41120-0.9233010.974409.42780K562SF3A3
WARS2ENSG00000116874.7187.50490334.18180-0.833703.864001.50260K562SMNDC1
WARS2ENSG00000116874.7295.19000494.24110-0.743608.281506.76020K562SRPK2
WARS2ENSG00000116874.7307.49960408.96660-0.411402.622201.48830K562SRSF7
WARS2ENSG00000116874.7166.19330351.96310-1.082608.287606.59890K562TIAL1
WARS2ENSG00000116874.7264.14680373.93840-0.501502.632501.71510K562TRIM56
WARS2ENSG00000116874.7586.52280409.888200.516904.458403.44450K562U2AF2
WARS2ENSG00000116874.7229.77860365.86780-0.671104.232102.94600K562UCHL5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for WARS2 is not available on ENCORE database.





10 RBPs can affect the splicing of WARS2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEWARS2ENSG00000116874.7chr1-119584886119584972119576751119576836119588204119588285-0.248000.001100.02223excludedHepG2U2AF1
SEWARS2ENSG00000116874.7chr1-1196672211196673061196191431196192301196831771196832710.169000.001020.07792includedK562XRCC6
SEWARS2ENSG00000116874.7chr1-119584886119584972119576717119576836119588204119588285-0.216000.000300.00437excludedK562AQR
SEWARS2ENSG00000116874.7chr1-119667221119667306119619143119619230119683177119683271-0.102000.004660.05900excludedK562PUS1
SEWARS2ENSG00000116874.7chr1-1195848861195849721195767511195768361195882041195882850.121000.003060.06116includedHepG2SRSF1
SEWARS2ENSG00000116874.7chr1-119584886119584972119576751119576836119588204119588285-0.177000.002580.06376excludedHepG2SF3A3
SEWARS2ENSG00000116874.7chr1-119667221119667306119619143119619230119683177119683271-0.066000.001530.08663excludedK562HNRNPUL1
SEWARS2ENSG00000116874.7chr1-119667221119667306119619143119619230119683177119683271-0.134000.000160.00836excludedK562UTP18
SEWARS2ENSG00000116874.7chr1-119667221119667306119619143119619230119683177119683271-0.134000.000690.02062excludedK562RBM15
SEWARS2ENSG00000116874.7chr1-119584886119584972119576751119576836119588204119588285-0.217000.004300.06179excludedK562HNRNPC
A3SSWARS2ENSG00000116874.7chr1-1196191431196193311196191431196192301196831771196832710.132000.000010.00007longerK562AQR
A3SSWARS2ENSG00000116874.7chr1-1195767171195769161195767171195768361195848861195849720.101000.000040.00037longerK562AQR
A3SSWARS2ENSG00000116874.7chr1-1195848861195850331195848861195849721195882041195882850.101000.000510.00377longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for WARS2 is not avaliable on ENCORE database.