VASH1

General Information

Gene Name       : VASH1
Gene ID             : ENSG00000071246.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: VASH1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878VASH1ENSG00000071246.100.620.830.72ENCSR000AEF
HepG2VASH1ENSG00000071246.100.400.250.33ENCSR985KAT
K562VASH1ENSG00000071246.100.080.020.05ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for VASH1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on VASH1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for VASH1 is not avaliable on ENCORE database.






NO known proteins are bound to VASH1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for VASH1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for VASH1 is not available on ENCORE database.

  • 70 RBPs can affect the levels of VASH1.  








The Knockdown/knockout RNA-Seq assay for VASH1 is not available on ENCORE database.





70 RBPs can affect the gene expression of VASH1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
VASH1ENSG00000071246.615.2569043.92150-1.525502.285001.42430HepG2ABCF1
VASH1ENSG00000071246.613.9189040.91100-1.555402.943001.91630HepG2ADAR
VASH1ENSG00000071246.6163.8352015.171203.4327020.2874018.98400HepG2AKAP1
VASH1ENSG00000071246.636.103508.125002.151603.593601.70300HepG2APOBEC3C
VASH1ENSG00000071246.6161.3536012.554103.6839025.8088023.76410HepG2ASCC1
VASH1ENSG00000071246.6168.2302063.982901.394609.212508.08090HepG2AUH
VASH1ENSG00000071246.677.8974032.906401.243103.648602.24350HepG2BUD13
VASH1ENSG00000071246.6103.3634041.908101.302305.551004.66900HepG2CKAP4
VASH1ENSG00000071246.635.109208.707202.011503.090902.27940HepG2CNOT7
VASH1ENSG00000071246.611.8639033.22150-1.485501.980401.38760HepG2CPSF6
VASH1ENSG00000071246.611.8369040.41680-1.771703.446202.25820HepG2CSTF2
VASH1ENSG00000071246.614.8869048.73610-1.710903.345901.81210HepG2DDX28
VASH1ENSG00000071246.6163.9765014.535503.4957023.3107021.68040HepG2DDX3X
VASH1ENSG00000071246.6130.4633012.480203.3858018.6390017.22810HepG2DDX6
VASH1ENSG00000071246.6114.5143026.618302.104909.657607.70390HepG2AGO1
VASH1ENSG00000071246.644.8152012.003601.900403.710803.03090HepG2EIF2S1
VASH1ENSG00000071246.657.4678012.912902.153804.805803.91410HepG2EIF4B
VASH1ENSG00000071246.620.6232052.63260-1.351702.951502.11120HepG2EIF4G2
VASH1ENSG00000071246.679.4731013.378302.570509.054307.86760HepG2FXR1
VASH1ENSG00000071246.694.6203012.415002.9300013.1677011.77690HepG2G3BP1
VASH1ENSG00000071246.655.9623025.573601.129702.075401.30460HepG2GEMIN5
VASH1ENSG00000071246.643.133308.053002.421105.056103.54640HepG2GRSF1
VASH1ENSG00000071246.6112.4883040.014101.491107.679406.15140HepG2HDGF
VASH1ENSG00000071246.616.2529046.26140-1.509102.750302.05900HepG2HNRNPC
VASH1ENSG00000071246.631.1011074.94680-1.268903.812002.98250HepG2HNRNPF
VASH1ENSG00000071246.623.6637050.74610-1.100602.435401.79910HepG2HNRNPL
VASH1ENSG00000071246.63.2591035.93650-3.462905.850404.97040HepG2HNRNPLL
VASH1ENSG00000071246.675.0337045.955500.707201.799401.30120HepG2HNRNPU
VASH1ENSG00000071246.667.5981023.713101.511203.937402.46270HepG2HSPD1
VASH1ENSG00000071246.624.9081073.80180-1.567004.804303.87500HepG2IGF2BP1
VASH1ENSG00000071246.666.1869012.621202.390606.139905.17120HepG2IGF2BP2
VASH1ENSG00000071246.684.7372037.951801.158703.566501.72550HepG2CCAR2
VASH1ENSG00000071246.633.1148066.43580-1.004502.082201.36960HepG2LARP4
VASH1ENSG00000071246.663.6094013.459202.240505.813504.92410HepG2MATR3
VASH1ENSG00000071246.698.1559030.058101.707204.518003.19360HepG2METAP2
VASH1ENSG00000071246.6160.4454055.234401.538309.683408.28400HepG2NOL12
VASH1ENSG00000071246.625.6887059.08980-1.201802.329301.33420HepG2NONO
VASH1ENSG00000071246.610.2953031.86650-1.630102.056101.40710HepG2NSUN2
VASH1ENSG00000071246.6117.410609.642503.6059022.6389021.18030HepG2PCBP1
VASH1ENSG00000071246.617.5975040.98870-1.219902.274601.59970HepG2PPIL4
VASH1ENSG00000071246.6112.6210047.935801.232203.331901.39110HepG2PSIP1
VASH1ENSG00000071246.6135.993409.814903.7923025.6424024.29950HepG2PTBP1
VASH1ENSG00000071246.6169.4969055.923601.599609.894308.66770HepG2PUM2
VASH1ENSG00000071246.6128.0257061.396801.060104.446903.83050HepG2RBM22
VASH1ENSG00000071246.628.261209.643501.551102.172201.56940HepG2RBM25
VASH1ENSG00000071246.610.3300041.13050-1.993402.484001.48010HepG2RCC2
VASH1ENSG00000071246.669.9491010.920302.679208.084807.24700HepG2NELFE
VASH1ENSG00000071246.664.5043010.175702.664208.479807.48990HepG2RECQL
VASH1ENSG00000071246.614.5126080.72710-2.475709.019707.89620HepG2RPLP0
VASH1ENSG00000071246.630.073908.705501.788402.334401.59680HepG2RPS3A
VASH1ENSG00000071246.618.1902040.92550-1.169802.098301.52470HepG2SAFB2
VASH1ENSG00000071246.685.0206027.353801.636003.141801.67710HepG2SF1
VASH1ENSG00000071246.617.6526040.83850-1.210102.183601.58370HepG2SF3A3
VASH1ENSG00000071246.658.5996010.212602.520407.165706.28560HepG2SF3B4
VASH1ENSG00000071246.624.7611050.54150-1.029402.133301.50370HepG2SLBP
VASH1ENSG00000071246.687.0705047.726300.867302.613201.98450HepG2SMN1
VASH1ENSG00000071246.611.0610038.27620-1.791002.587101.62260HepG2SRSF3
VASH1ENSG00000071246.6113.1452052.048901.120104.481703.71950HepG2SRSF5
VASH1ENSG00000071246.628.7026073.63070-1.359104.281303.44400HepG2SRSF7
VASH1ENSG00000071246.626.890008.676301.631802.479501.95050HepG2SRSF9
VASH1ENSG00000071246.66.4736060.21280-3.2174010.345509.47560HepG2SSB
VASH1ENSG00000071246.68.2828029.62220-1.838502.553301.35720HepG2STAU1
VASH1ENSG00000071246.6144.1869059.199201.284206.723305.82830HepG2SUCLG1
VASH1ENSG00000071246.619.0451044.65510-1.229402.479702.00150HepG2TIAL1
VASH1ENSG00000071246.613.5501037.83380-1.481402.637701.89830HepG2UCHL5
VASH1ENSG00000071246.626.7571063.04880-1.236502.679401.96630HepG2XRN2
VASH1ENSG00000071246.612.5974039.83250-1.660803.425302.83510HepG2ZNF622
VASH1ENSG00000071246.622.780606.528101.803002.104201.46290K562EIF2S2
VASH1ENSG00000071246.625.028106.715901.897802.279401.50060K562FMR1
VASH1ENSG00000071246.625.294604.417302.517503.259501.94820K562UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for VASH1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of VASH1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for VASH1 is not avaliable on ENCORE database.