TSNARE1

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TSNARE1	ENSG00000171045.14	0.10	1.07	0.59	ENCSR000AEF
HepG2	TSNARE1	ENSG00000171045.14	6.54	1.10	3.82	ENCSR985KAT
K562	TSNARE1	ENSG00000171045.14	3.03	0.98	2.00	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TSNARE1 is not avaliable on ENCORE database.

Proteins bound to RNA

TSNARE1 RNA is bound by 33 proteins.

eCLIP assay for TSNARE1 is not avaliable on ENCORE database.

33 proteins are bound to TSNARE1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	143352361	143352446	-	3'-UTR,intron-Distal	3.70013	5.80161	HepG2	CSTF2T
chr8	143484198	143484295	-	5'-UTR,intron-Distal,intron-Proximal	4.20208	3.70058	K562	CSTF2T
chr8	143484217	143484303	-	5'-UTR,intron-Distal,intron-Proximal	4.07412	3.30705	HepG2	GTF2F1
chr8	143484212	143484297	-	5'-UTR,intron-Distal,intron-Proximal	5.94399	15.39233	HepG2	CSTF2T
chr8	143484206	143484294	-	5'-UTR,intron-Distal,intron-Proximal	4.87219	12.92243	HepG2	FAM120A
chr8	143484144	143484212	-	5'-UTR,intron-Distal	3.87809	6.03429	HepG2	CSTF2T
chr8	143484212	143484302	-	5'-UTR,intron-Distal,intron-Proximal	3.80716	6.48632	HepG2	PRPF4
chr8	143484195	143484259	-	5'-UTR,intron-Distal,intron-Proximal	3.08778	3.12311	K562	DROSHA
chr8	143484198	143484285	-	5'-UTR,intron-Distal,intron-Proximal	4.59977	3.26683	HepG2	FASTKD2
chr8	143395750	143395802	-	CDS,intron-Distal,intron-Proximal	4.06436	4.96634	HepG2	PPIG
chr8	143399903	143399970	-	CDS,intron-Distal,intron-Proximal	4.43096	8.09084	HepG2	PPIG
chr8	143436000	143436085	-	CDS,intron-Distal	3.64744	6.54857	HepG2	PPIG
chr8	143396399	143396449	-	CDS,intron-Distal	3.55493	4.41267	HepG2	PPIG
chr8	143382007	143382067	-	CDS,intron-Distal,intron-Proximal	3.42409	4.14880	HepG2	CSTF2T
chr8	143365741	143365837	-	CDS,intron-Distal,intron-Proximal	3.14905	6.89364	HepG2	PPIG
chr8	143412257	143412328	-	CDS,intron-Distal,intron-Proximal	3.40222	6.00907	HepG2	PPIG
chr8	143381914	143381950	-	CDS,intron-Distal	4.46616	3.49905	HepG2	PPIG
chr8	143365732	143365802	-	CDS,intron-Distal,intron-Proximal	3.48755	4.54206	HepG2	PRPF8
chr8	143381846	143381914	-	CDS,intron-Distal,intron-Proximal	3.71132	6.54857	HepG2	PPIG
chr8	143359229	143359299	-	intron-Distal	3.58091	3.28007	HepG2	NKRF
chr8	143400102	143400242	-	intron-Distal	5.15117	13.94191	HepG2	PTBP1
chr8	143479056	143479100	-	intron-Distal	3.62336	4.60046	HepG2	CSTF2T
chr8	143364898	143364949	-	intron-Distal	4.70702	10.60267	HepG2	QKI
chr8	143358498	143358566	-	intron-Distal	3.98993	6.99039	HepG2	CSTF2T
chr8	143408890	143408980	-	intron-Distal	3.24244	3.46580	HepG2	CSTF2T
chr8	143476900	143476963	-	intron-Distal	3.91898	3.28464	K562	EWSR1
chr8	143394520	143394625	-	intron-Distal	4.35497	10.71488	K562	HNRNPL
chr8	143359408	143359483	-	intron-Distal	5.19345	7.38471	HepG2	NKRF
chr8	143477407	143477521	-	intron-Distal	4.72034	6.54349	K562	CSTF2T
chr8	143431262	143431365	-	intron-Distal	5.01675	4.92687	K562	PCBP1
chr8	143465654	143465693	-	intron-Distal	3.97753	3.54208	HepG2	SUGP2
chr8	143460570	143460650	-	intron-Distal	3.80393	3.07008	K562	NONO
chr8	143442400	143442446	-	intron-Distal	4.19437	4.36133	HepG2	CSTF2T
chr8	143359402	143359475	-	intron-Distal	5.69379	5.80550	HepG2	SLTM
chr8	143394890	143394921	-	intron-Distal	4.99090	4.24565	HepG2	HNRNPL
chr8	143396454	143396552	-	intron-Distal,intron-Proximal	3.80784	4.84286	HepG2	PRPF4
chr8	143450000	143450073	-	intron-Distal	4.54218	5.58061	HepG2	SUGP2
chr8	143355269	143355324	-	intron-Distal	3.65696	3.15816	HepG2	PRPF4
chr8	143394267	143394415	-	intron-Distal	4.80105	8.70712	HepG2	XPO5
chr8	143401615	143401703	-	intron-Distal	4.38130	5.40707	K562	CSTF2T
chr8	143394578	143394662	-	intron-Distal	6.40943	15.69497	K562	AGGF1
chr8	143373277	143373331	-	intron-Distal	3.27728	3.96999	HepG2	CSTF2T
chr8	143374617	143374658	-	intron-Distal	3.97754	3.87340	HepG2	CSTF2T
chr8	143358123	143358182	-	intron-Distal	4.44235	4.10564	HepG2	CSTF2T
chr8	143401369	143401428	-	intron-Distal	3.43496	4.33898	HepG2	FAM120A
chr8	143479257	143479365	-	intron-Distal	4.11021	7.71647	HepG2	FAM120A
chr8	143439034	143439093	-	intron-Distal	3.25211	4.14880	HepG2	CSTF2T
chr8	143441939	143442001	-	intron-Distal	3.91393	6.26465	HepG2	CSTF2T
chr8	143460958	143461016	-	intron-Distal	4.08091	4.03786	HepG2	NKRF
chr8	143354201	143354286	-	intron-Distal	4.29518	11.84375	HepG2	XPO5
chr8	143475663	143475696	-	intron-Distal	3.87179	3.44758	HepG2	CSTF2T
chr8	143396595	143396628	-	intron-Distal	4.02585	3.40229	HepG2	CSTF2T
chr8	143401614	143401704	-	intron-Distal	3.30344	4.41542	HepG2	FAM120A
chr8	143406150	143406240	-	intron-Distal	4.68973	6.08348	HepG2	CSTF2T
chr8	143445467	143445543	-	intron-Distal	4.01408	3.16310	HepG2	CSTF2T
chr8	143483304	143483358	-	intron-Distal	4.05916	5.89423	HepG2	HNRNPM
chr8	143451081	143451128	-	intron-Distal	4.03948	3.27829	HepG2	MATR3
chr8	143358757	143358816	-	intron-Distal	3.39531	5.12571	HepG2	CSTF2T
chr8	143363228	143363320	-	intron-Distal	3.16275	3.48042	HepG2	NKRF
chr8	143442933	143442993	-	intron-Distal	3.40189	5.36249	HepG2	CSTF2T
chr8	143436194	143436232	-	intron-Distal,intron-Proximal	3.92911	3.19526	HepG2	CSTF2T
chr8	143377704	143377794	-	intron-Distal	4.61137	4.83379	HepG2	HNRNPK
chr8	143363513	143363580	-	intron-Distal	3.38154	3.35377	HepG2	QKI
chr8	143356746	143356795	-	intron-Distal	4.40189	4.86859	HepG2	CSTF2T
chr8	143463080	143463123	-	intron-Distal	3.35810	4.37279	HepG2	CSTF2T
chr8	143359405	143359488	-	intron-Distal	3.36767	6.41767	HepG2	FAM120A
chr8	143367012	143367143	-	intron-Distal	5.91837	12.92204	K562	AGGF1
chr8	143384310	143384356	-	intron-Distal	4.19437	4.36133	HepG2	CSTF2T
chr8	143437639	143437718	-	intron-Distal	4.66608	5.84605	HepG2	CSTF2T
chr8	143401382	143401423	-	intron-Distal	4.06976	3.87340	HepG2	CSTF2T
chr8	143478888	143478933	-	intron-Distal	3.24015	4.88713	HepG2	CSTF2T
chr8	143458384	143458510	-	intron-Distal	4.63829	5.64992	HepG2	NKRF
chr8	143442736	143442783	-	intron-Distal	3.19437	3.69530	HepG2	CSTF2T
chr8	143459424	143459493	-	intron-Distal	3.99892	3.34098	HepG2	HNRNPM
chr8	143383530	143383577	-	intron-Distal	4.45856	4.61649	HepG2	CSTF2T
chr8	143440079	143440158	-	intron-Distal	3.61631	4.69054	HepG2	CSTF2T
chr8	143406145	143406235	-	intron-Distal	3.80392	3.93915	K562	EWSR1
chr8	143402132	143402214	-	intron-Distal	3.11631	5.12571	HepG2	CSTF2T
chr8	143378112	143378200	-	intron-Distal	4.99452	8.83237	HepG2	CSTF2T
chr8	143466533	143466632	-	intron-Distal	3.72405	5.32485	HepG2	SUGP2
chr8	143359413	143359487	-	intron-Distal	3.37220	3.91614	K562	BUD13
chr8	143478824	143478873	-	intron-Distal	3.83279	6.26465	HepG2	CSTF2T
chr8	143463425	143463458	-	intron-Distal	3.97754	3.94684	HepG2	CSTF2T
chr8	143424250	143424365	-	intron-Distal	4.05952	3.71028	HepG2	NKRF
chr8	143359407	143359494	-	intron-Distal	3.74415	6.67731	HepG2	PRPF4
chr8	143461149	143461209	-	intron-Distal	3.40112	4.88713	HepG2	CSTF2T
chr8	143396811	143396892	-	intron-Distal	3.46289	4.48585	K562	NONO
chr8	143479229	143479301	-	intron-Distal	5.88234	16.94336	HepG2	CSTF2T
chr8	143460865	143460901	-	intron-Distal	3.72159	3.16310	HepG2	CSTF2T
chr8	143479514	143479614	-	intron-Distal	5.92245	14.41880	HepG2	FAM120A
chr8	143354255	143354326	-	intron-Distal	4.04130	4.10323	HepG2	PRPF4
chr8	143459529	143459594	-	intron-Distal	4.30112	4.38558	HepG2	HNRNPM
chr8	143355238	143355310	-	intron-Distal	4.24867	3.36882	K562	SLTM
chr8	143363261	143363298	-	intron-Distal	3.98685	3.19526	HepG2	CSTF2T
chr8	143359213	143359274	-	intron-Distal	4.10395	3.30336	K562	EWSR1
chr8	143402053	143402115	-	intron-Distal	4.26205	5.07081	HepG2	XPO5
chr8	143424214	143424337	-	intron-Distal	3.12938	6.38100	HepG2	CSTF2T
chr8	143398803	143398924	-	intron-Distal	3.93345	3.06347	K562	NONO
chr8	143479530	143479600	-	intron-Distal	4.11416	11.98634	HepG2	CSTF2T
chr8	143479413	143479506	-	intron-Distal	3.99908	11.16643	HepG2	CSTF2T
chr8	143479434	143479500	-	intron-Distal	3.78518	6.00449	HepG2	FAM120A
chr8	143364988	143365053	-	intron-Distal	3.99628	5.08047	HepG2	QKI
chr8	143384665	143384716	-	intron-Distal	3.22493	3.00221	HepG2	CSTF2T
chr8	143478665	143478677	-	intron-Distal	3.83660	3.44758	HepG2	CSTF2T
chr8	143468110	143468196	-	intron-Distal	3.87354	3.29248	HepG2	SUGP2
chr8	143475949	143475992	-	intron-Distal	3.19089	3.48399	HepG2	CSTF2T
chr8	143431193	143431378	-	intron-Distal	6.14280	17.46247	HepG2	RBFOX2
chr8	143473790	143473958	-	intron-Distal	3.36244	4.25264	K562	NONO
chr8	143372831	143372874	-	intron-Distal	4.19437	4.68055	HepG2	CSTF2T
chr8	143401349	143401414	-	intron-Distal	3.48386	3.04054	K562	GTF2F1
chr8	143378121	143378170	-	intron-Distal	4.58916	4.73643	HepG2	DDX59
chr8	143372388	143372432	-	intron-Distal	3.17682	3.00221	HepG2	CSTF2T
chr8	143394211	143394273	-	intron-Distal	4.37139	4.02199	K562	HNRNPL
chr8	143431231	143431364	-	intron-Distal	4.46644	4.59677	K562	DROSHA
chr8	143477045	143477078	-	intron-Distal	4.21713	4.10339	HepG2	CSTF2T
chr8	143378598	143378653	-	intron-Distal	4.27314	4.36133	HepG2	CSTF2T
chr8	143394357	143394407	-	intron-Distal	3.94593	11.26881	HepG2	HNRNPL
chr8	143358625	143358669	-	intron-Distal	3.28139	3.23466	HepG2	CSTF2T
chr8	143394857	143394929	-	intron-Distal	4.16413	3.58932	HepG2	AGGF1
chr8	143450533	143450628	-	intron-Distal	3.20482	5.59399	HepG2	SUGP2
chr8	143394549	143394659	-	intron-Distal	4.06770	9.18037	HepG2	HNRNPL
chr8	143376670	143376714	-	intron-Distal	3.10593	3.46580	HepG2	CSTF2T
chr8	143394738	143394851	-	intron-Distal	3.70755	5.27540	HepG2	HNRNPL
chr8	143375332	143375434	-	intron-Distal	3.97699	3.65412	HepG2	HNRNPK
chr8	143460621	143460670	-	intron-Distal	3.17405	5.12571	HepG2	CSTF2T
chr8	143477422	143477497	-	intron-Distal	4.30952	8.66215	HepG2	CSTF2T
chr8	143463270	143463355	-	intron-Distal	3.96741	8.38969	HepG2	CSTF2T
chr8	143360217	143360267	-	intron-Distal	3.68036	5.80161	HepG2	CSTF2T
chr8	143440320	143440421	-	intron-Distal	3.65696	3.15816	HepG2	PRPF4
chr8	143359415	143359481	-	intron-Distal	3.74711	8.83513	HepG2	CSTF2T
chr8	143475053	143475090	-	intron-Distal	3.90535	3.44758	HepG2	CSTF2T
chr8	143477488	143477594	-	intron-Distal	4.64825	4.19739	K562	EIF4G2
chr8	143372113	143372177	-	intron-Distal	3.52162	4.88713	HepG2	CSTF2T
chr8	143359423	143359467	-	intron-Distal	4.67999	3.59041	K562	DROSHA
chr8	143359413	143359498	-	intron-Distal	3.53973	3.07152	HepG2	HLTF
chr8	143406791	143406897	-	intron-Distal	4.34548	4.62179	HepG2	HNRNPK
chr8	143440323	143440398	-	intron-Distal	5.31760	9.60672	HepG2	CSTF2T
chr8	143431222	143431370	-	intron-Distal	3.46731	3.00103	HepG2	DROSHA
chr8	143466537	143466623	-	intron-Distal	4.86896	7.15419	HepG2	MATR3
chr8	143359412	143359471	-	intron-Distal	4.01584	3.28841	HepG2	PTBP1
chr8	143440674	143440766	-	intron-Distal	3.46211	5.59719	HepG2	CSTF2T
chr8	143359416	143359474	-	intron-Distal	4.20277	4.14056	K562	EWSR1
chr8	143462505	143462560	-	intron-Distal	4.01899	3.57893	K562	EWSR1
chr8	143359427	143359495	-	intron-Distal	4.52062	3.20137	K562	DDX52
chr8	143394269	143394357	-	intron-Distal	4.98524	13.08520	HepG2	HNRNPL
chr8	143462754	143462819	-	intron-Distal	3.39803	5.82968	HepG2	CSTF2T
chr8	143425020	143425155	-	intron-Distal	5.19852	4.97123	HepG2	PCBP2
chr8	143396794	143396873	-	intron-Distal	4.28524	4.42197	K562	EWSR1
chr8	143360435	143360515	-	intron-Distal	3.42465	6.83379	HepG2	CSTF2T
chr8	143405810	143405893	-	intron-Distal	3.03456	3.12257	HepG2	CSTF2T
chr8	143385121	143385167	-	intron-Distal	4.70431	3.85055	HepG2	XPO5
chr8	143364840	143364874	-	intron-Distal	3.99628	3.30440	HepG2	QKI
chr8	143363536	143363622	-	intron-Distal	4.20142	4.03786	HepG2	NKRF
chr8	143438848	143438918	-	intron-Distal	3.47832	3.92299	HepG2	CSTF2T
chr8	143462498	143462651	-	intron-Distal	4.73346	11.88189	HepG2	CSTF2T
chr8	143476603	143476677	-	intron-Distal	5.00511	6.05659	HepG2	CSTF2T
chr8	143364736	143364789	-	intron-Distal	5.33000	7.94700	HepG2	QKI
chr8	143479301	143479339	-	intron-Distal	5.08673	8.98373	HepG2	CSTF2T
chr8	143382388	143382461	-	intron-Distal	4.25496	4.28089	HepG2	FAM120A
chr8	143378947	143379005	-	intron-Distal	3.20127	3.27222	HepG2	CSTF2T
chr8	143400071	143400226	-	intron-Distal,intron-Proximal	3.60260	5.09606	K562	PTBP1
chr8	143400797	143400849	-	intron-Distal	4.71825	5.84605	HepG2	CSTF2T
chr8	143404309	143404468	-	intron-Distal	4.07544	3.98095	HepG2	HNRNPL
chr8	143397022	143397089	-	intron-Distal	5.01408	7.09999	HepG2	CSTF2T
chr8	143477437	143477500	-	intron-Distal	4.38876	4.14056	K562	EWSR1
chr8	143382216	143382292	-	intron-Distal	4.34603	4.10564	HepG2	CSTF2T
chr8	143389805	143389941	-	intron-Distal	3.70613	3.07274	HepG2	SRSF9
chr8	143445028	143445092	-	intron-Distal	4.58539	5.60609	HepG2	CSTF2T
chr8	143396800	143396890	-	intron-Distal	4.00378	9.96838	HepG2	CSTF2T
chr8	143459922	143459991	-	intron-Distal	5.64879	9.29959	HepG2	XPO5
chr8	143377527	143377603	-	intron-Distal	4.06728	3.31570	HepG2	HNRNPK
chr8	143377344	143377397	-	intron-Distal	3.90921	4.74496	HepG2	DDX59
chr8	143394291	143394436	-	intron-Distal	4.56673	12.08621	HepG2	AGGF1
chr8	143474997	143475046	-	intron-Distal	4.48685	4.86859	HepG2	CSTF2T
chr8	143353358	143353464	-	intron-Distal	3.32590	4.35431	HepG2	PRPF4
chr8	143359226	143359284	-	intron-Distal	4.50371	3.99130	HepG2	FAM120A
chr8	143478786	143478867	-	intron-Distal	4.39068	3.58113	K562	EWSR1
chr8	143364503	143364538	-	intron-Distal	4.33380	3.80778	HepG2	QKI
chr8	143411589	143411658	-	intron-Distal	3.61373	5.08839	HepG2	CSTF2T
chr8	143468144	143468205	-	intron-Distal	4.39745	5.02084	HepG2	HNRNPM
chr8	143355241	143355334	-	intron-Distal	3.80606	5.08839	HepG2	CSTF2T
chr8	143431378	143431501	-	intron-Distal	4.83815	11.15227	HepG2	RBFOX2
chr8	143380825	143380900	-	intron-Distal	4.15721	3.14014	K562	EIF4G2
chr8	143394465	143394658	-	intron-Distal	3.03328	5.85072	HepG2	AGGF1
chr8	143357983	143358086	-	intron-Distal	3.92451	11.16643	HepG2	CSTF2T
chr8	143401373	143401419	-	intron-Distal	3.81684	3.29554	HepG2	GTF2F1
chr8	143394283	143394324	-	intron-Distal	6.27409	13.38324	K562	AGGF1
chr8	143420785	143420848	-	intron-Distal	3.49908	4.69054	HepG2	CSTF2T
chr8	143442299	143442367	-	intron-Distal	3.90232	6.49292	HepG2	CSTF2T
chr8	143402591	143402652	-	intron-Distal	3.30112	3.39857	HepG2	HNRNPM
chr8	143394662	143394748	-	intron-Distal	5.99081	12.00098	K562	AGGF1
chr8	143353598	143353670	-	intron-Distal	4.77286	4.59460	K562	AKAP8L
chr8	143363493	143363629	-	intron-Distal	4.22006	3.38171	K562	TBRG4
chr8	143394273	143394429	-	intron-Distal	6.53054	27.77836	K562	HNRNPL
chr8	143358863	143358917	-	intron-Distal	3.45820	6.96229	HepG2	CSTF2T
chr8	143371651	143371705	-	intron-Distal	4.07523	4.10339	HepG2	CSTF2T
chr8	143416542	143416615	-	intron-Distal	4.00536	3.50031	HepG2	HNRNPL
chr8	143458420	143458497	-	intron-Distal	3.65883	5.56645	HepG2	CSTF2T
chr8	143401375	143401457	-	intron-Distal	5.11926	8.06849	HepG2	PRPF4
chr8	143357298	143357406	-	intron-Distal	3.20142	4.85104	HepG2	NKRF
chr8	143383392	143383475	-	intron-Distal	4.87360	8.08715	HepG2	CSTF2T
chr8	143475407	143475445	-	intron-Distal	4.19437	4.36133	HepG2	CSTF2T
chr8	143422124	143422211	-	intron-Distal	3.07143	4.74807	HepG2	CSTF2T
chr8	143367216	143367317	-	intron-Distal	3.38460	4.04785	HepG2	XPO5
chr8	143443673	143443721	-	intron-Distal	4.19089	4.10339	HepG2	CSTF2T
chr8	143397355	143397391	-	intron-Distal	3.99756	3.40229	HepG2	CSTF2T
chr8	143484094	143484144	-	intron-Distal	3.40879	4.35339	HepG2	CSTF2T
chr8	143378728	143378781	-	intron-Distal	4.07387	4.19345	HepG2	CSTF2T
chr8	143401643	143401740	-	intron-Distal	5.07434	9.34107	HepG2	PRPF4
chr8	143373828	143373871	-	intron-Distal	3.99756	3.40229	HepG2	CSTF2T
chr8	143358917	143358960	-	intron-Distal	3.63913	5.80161	HepG2	CSTF2T
chr8	143475202	143475282	-	intron-Distal	4.07284	6.49292	HepG2	CSTF2T
chr8	143394429	143394479	-	intron-Distal	4.72796	7.01052	K562	HNRNPL
chr8	143401359	143401424	-	intron-Distal	3.86397	3.38470	HepG2	NKRF
chr8	143356505	143356541	-	intron-Distal	3.99756	3.44758	HepG2	CSTF2T
chr8	143484384	143484443	-	intron-Distal	3.57250	5.08839	HepG2	CSTF2T
chr8	143460589	143460666	-	intron-Distal	4.35520	4.46290	K562	EWSR1
chr8	143377688	143377808	-	intron-Distal	4.68883	6.64523	HepG2	AKAP1
chr8	143378827	143378890	-	intron-Distal	4.49456	7.66078	HepG2	XPO5
chr8	143359424	143359485	-	intron-Distal	3.84653	3.17740	K562	CSTF2T
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for TSNARE1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TSNARE1 is not available on ENCORE database.
39 RBPs can affect the levels of TSNARE1.

The Knockdown/knockout RNA-Seq assay for TSNARE1 is not available on ENCORE database.

39 RBPs can affect the gene expression of TSNARE1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TSNARE1	ENSG00000171045.10	114.45510	66.90940	0.77440	1.99950	1.35380	HepG2	CNOT7
TSNARE1	ENSG00000171045.10	212.82410	149.02790	0.51400	2.73940	1.90920	HepG2	DDX19B
TSNARE1	ENSG00000171045.10	90.17480	51.53110	0.80720	2.38620	1.72730	HepG2	DNAJC21
TSNARE1	ENSG00000171045.10	87.77680	51.08020	0.78100	2.41760	1.80120	HepG2	DNAJC2
TSNARE1	ENSG00000171045.10	365.75090	274.91190	0.41180	2.28780	1.73250	HepG2	ETF1
TSNARE1	ENSG00000171045.10	133.00730	84.11480	0.66100	1.85220	1.32150	HepG2	GPKOW
TSNARE1	ENSG00000171045.10	255.67980	147.90620	0.78960	4.06420	3.23150	HepG2	HNRNPK
TSNARE1	ENSG00000171045.10	114.87920	57.48670	0.99870	4.09140	3.36510	HepG2	HNRNPU
TSNARE1	ENSG00000171045.10	126.07070	84.70820	0.57360	2.05610	1.42580	HepG2	IGF2BP1
TSNARE1	ENSG00000171045.10	191.08650	98.98900	0.94880	5.22500	4.18230	HepG2	NOL12
TSNARE1	ENSG00000171045.10	103.18830	48.80910	1.08000	3.15040	1.60220	HepG2	NOLC1
TSNARE1	ENSG00000171045.10	142.36050	51.27330	1.47320	8.84040	7.56980	HepG2	PPIL4
TSNARE1	ENSG00000171045.10	194.81050	94.48660	1.04380	5.60450	4.79540	HepG2	PUF60
TSNARE1	ENSG00000171045.10	171.97900	100.29340	0.77790	3.77130	3.10180	HepG2	PUM1
TSNARE1	ENSG00000171045.10	226.65230	100.22530	1.17710	3.53040	2.77720	HepG2	PUM2
TSNARE1	ENSG00000171045.10	151.26900	67.23750	1.16970	4.99590	3.92100	HepG2	RPS3A
TSNARE1	ENSG00000171045.10	126.41790	51.19360	1.30410	6.62210	5.68900	HepG2	SAFB2
TSNARE1	ENSG00000171045.10	123.85110	63.31450	0.96790	3.42790	1.98110	HepG2	SART3
TSNARE1	ENSG00000171045.10	140.14890	63.84420	1.13420	4.30680	2.38990	HepG2	SBDS
TSNARE1	ENSG00000171045.10	133.68900	79.44850	0.75070	2.43460	1.77140	HepG2	SF3B1
TSNARE1	ENSG00000171045.10	183.68330	90.58090	1.01980	6.02040	5.04680	HepG2	SLBP
TSNARE1	ENSG00000171045.10	73.54630	186.48110	-1.34230	8.59970	7.87140	HepG2	SRSF1
TSNARE1	ENSG00000171045.10	159.06710	85.50430	0.89550	3.04470	1.98660	HepG2	SRSF3
TSNARE1	ENSG00000171045.10	174.04850	93.28180	0.89970	4.61050	3.83830	HepG2	SRSF5
TSNARE1	ENSG00000171045.10	125.16900	84.50650	0.56660	2.15390	1.53130	HepG2	SRSF7
TSNARE1	ENSG00000171045.10	113.71500	58.50650	0.95870	3.49210	2.24340	HepG2	STIP1
TSNARE1	ENSG00000171045.10	91.39760	167.59080	-0.87470	4.16940	3.50230	HepG2	TAF15
TSNARE1	ENSG00000171045.10	134.90480	55.85390	1.27210	6.20360	5.50820	HepG2	TIAL1
TSNARE1	ENSG00000171045.10	150.77410	56.35870	1.41960	7.13960	6.30700	HepG2	TRIM56
TSNARE1	ENSG00000171045.10	163.26080	92.29580	0.82270	2.36860	1.56550	HepG2	TUFM
TSNARE1	ENSG00000171045.10	189.43170	97.68480	0.95540	3.45780	2.51930	HepG2	UBE2L3
TSNARE1	ENSG00000171045.10	114.52580	60.22760	0.92710	3.16780	1.98700	HepG2	XPO5
TSNARE1	ENSG00000171045.10	79.00400	44.18380	0.83830	2.19980	1.34200	K562	BCLAF1
TSNARE1	ENSG00000171045.10	68.93310	33.52000	1.04010	2.36650	1.40110	K562	CSTF2
TSNARE1	ENSG00000171045.10	21.17440	57.12620	-1.43180	3.30650	2.05430	K562	FKBP4
TSNARE1	ENSG00000171045.10	2.22830	19.07660	-3.09780	3.27810	2.49630	K562	G3BP2
TSNARE1	ENSG00000171045.10	53.72540	99.30540	-0.88630	2.23030	1.45860	K562	NAA15
TSNARE1	ENSG00000171045.10	70.04520	118.20120	-0.75490	2.35720	1.84770	K562	PUS1
TSNARE1	ENSG00000171045.10	90.42630	48.55260	0.89710	2.12590	1.41670	K562	TIA1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TSNARE1 is not available on ENCORE database.

3 RBPs can affect the splicing of TSNARE1 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	TSNARE1	ENSG00000171045.10	chr8	-	143381846	143382008	143381846	143382005	143395744	143395801	-0.47500	0.00039	0.01231	shorter	HepG2	U2AF2
A3SS	TSNARE1	ENSG00000171045.10	chr8	-	143381846	143382008	143381846	143382005	143395744	143395801	-0.52800	0.00020	0.04509	shorter	HepG2	SFPQ
A3SS	TSNARE1	ENSG00000171045.10	chr8	-	143381846	143382008	143381846	143382005	143412261	143412331	-0.62800	0.00087	0.08935	shorter	K562	RBM15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TSNARE1

General Information

Functions

Localization

Domains (AlphaFold: TSNARE1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TSNARE1 is not avaliable on ENCORE database.

33 proteins are bound to TSNARE1 RNA:

eCLIP assay for TSNARE1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TSNARE1 is not available on ENCORE database.

39 RBPs can affect the gene expression of TSNARE1 :

The Knockdown/knockout RNA-Seq assay for TSNARE1 is not available on ENCORE database.

3 RBPs can affect the splicing of TSNARE1 :

The Knockdown/knockout RNA-Seq assay for TSNARE1 is not avaliable on ENCORE database.