TAF12

General Information

Gene Name       : TAF12
Gene ID             : ENSG00000120656.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TAF12)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TAF12ENSG00000120656.1117.8618.3818.12ENCSR000AEF
HepG2TAF12ENSG00000120656.119.3815.1612.27ENCSR985KAT
K562TAF12ENSG00000120656.1131.9235.6533.78ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TAF12 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TAF12 RNA is bound by 6 proteins.  







eCLIP assay for TAF12 is not avaliable on ENCORE database.





6 proteins are bound to TAF12 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12892963228929720-3'-UTR,intron-Distal3.350647.69244K562FAM120A
chr12894848128948570-CDS,intron-Distal3.658389.11324K562IGF2BP2
chr12893980628939836-CDS,intron-Distal3.7796914.13725K562YBX3
chr12894849528948583-CDS,intron-Distal3.611724.47973K562YBX3
chr12893983628939853-CDS,intron-Distal3.418147.59425K562YBX3
chr12893978828939859-CDS,intron-Distal3.510247.25501K562LIN28B
chr12894842728948481-CDS,intron-Distal4.038337.43791K562IGF2BP2
chr12894847728948580-CDS,intron-Distal3.995096.71517K562IGF2BP1
chr12893629628936405-intron-Distal3.982793.57189K562ILF3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TAF12 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TAF12 is not available on ENCORE database.

  • 58 RBPs can affect the levels of TAF12.  








The Knockdown/knockout RNA-Seq assay for TAF12 is not available on ENCORE database.





58 RBPs can affect the gene expression of TAF12 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TAF12ENSG00000120656.7282.29170190.559500.566803.432902.76800HepG2ACO1
TAF12ENSG00000120656.7439.38610256.359900.777204.677904.00890HepG2AKAP1
TAF12ENSG00000120656.7364.36410212.111200.780504.981603.94160HepG2ASCC1
TAF12ENSG00000120656.7546.55900393.653100.473402.305801.42410HepG2CCAR1
TAF12ENSG00000120656.7297.45930201.521900.561702.680301.91910HepG2CIRBP
TAF12ENSG00000120656.7262.23240390.74290-0.575403.270102.52850HepG2CPSF6
TAF12ENSG00000120656.7294.92020170.996200.786304.862103.98960HepG2DDX21
TAF12ENSG00000120656.7199.44880443.71650-1.153607.075905.55060HepG2DDX59
TAF12ENSG00000120656.7323.73170212.846800.604902.933101.98690HepG2EEF2
TAF12ENSG00000120656.7128.81120202.78400-0.654702.591302.01710HepG2EIF2S1
TAF12ENSG00000120656.7258.69960172.791500.582102.814901.90530HepG2EIF3D
TAF12ENSG00000120656.7400.38230224.087700.837205.559004.65400HepG2EIF4A3
TAF12ENSG00000120656.7194.63490284.00880-0.545202.552001.76790HepG2EIF4G2
TAF12ENSG00000120656.7254.66320337.94480-0.408202.247001.69590HepG2ETF1
TAF12ENSG00000120656.7161.09690334.70260-1.055006.917805.75770HepG2FIP1L1
TAF12ENSG00000120656.7310.41400442.94360-0.512902.643802.01550HepG2GPKOW
TAF12ENSG00000120656.7179.85930276.17900-0.618703.526102.48970HepG2HNRNPA2B1
TAF12ENSG00000120656.7281.49450203.196300.470101.951601.35790HepG2HNRNPC
TAF12ENSG00000120656.7267.10480353.71590-0.405202.411101.73840HepG2HNRNPF
TAF12ENSG00000120656.7100.61830212.43860-1.078205.810304.82680HepG2HNRNPK
TAF12ENSG00000120656.7246.80200422.70870-0.776305.397304.54840HepG2HNRNPLL
TAF12ENSG00000120656.7247.89210348.30910-0.490702.983402.23420HepG2IGF2BP1
TAF12ENSG00000120656.7344.13980226.211900.605203.136102.43810HepG2MAGOH
TAF12ENSG00000120656.7436.48330227.471800.940105.589404.71780HepG2MATR3
TAF12ENSG00000120656.7292.10740180.847000.691602.271701.31670HepG2METAP2
TAF12ENSG00000120656.7158.56170232.82510-0.554202.118201.56090HepG2NCBP2
TAF12ENSG00000120656.7113.94930207.32310-0.863504.209703.33080HepG2PABPC4
TAF12ENSG00000120656.780.25380211.30600-1.396708.350606.64660HepG2PCBP2
TAF12ENSG00000120656.7134.66420284.44860-1.078807.909006.96970HepG2PUF60
TAF12ENSG00000120656.7382.43570282.459300.437102.629802.12180HepG2RBM22
TAF12ENSG00000120656.7128.61800225.53830-0.810304.522803.67770HepG2RBM25
TAF12ENSG00000120656.7353.32460255.359300.468402.534802.01390HepG2NELFE
TAF12ENSG00000120656.7274.89420168.127200.709204.026003.29870HepG2RPS19
TAF12ENSG00000120656.7279.54910418.40170-0.581803.529302.74180HepG2SF3B1
TAF12ENSG00000120656.7235.86520347.51460-0.559103.933403.12490HepG2SRSF7
TAF12ENSG00000120656.7295.27950224.100800.397801.904701.42410HepG2TAF15
TAF12ENSG00000120656.7299.73420411.99390-0.458902.416701.73270HepG2TARDBP
TAF12ENSG00000120656.7185.12610286.30090-0.629003.172902.50270HepG2U2AF1
TAF12ENSG00000120656.7312.50380209.715600.575303.638402.96760HepG2UTP3
TAF12ENSG00000120656.7318.07950238.898200.412902.480601.95470HepG2ZNF622
TAF12ENSG00000120656.7795.96520583.534100.447804.565902.25160K562DDX24
TAF12ENSG00000120656.72039.843301518.943100.425306.025705.11660K562DDX47
TAF12ENSG00000120656.7392.22150624.44320-0.670905.645004.31480K562EFTUD2
TAF12ENSG00000120656.7962.01370591.903100.700604.032702.79300K562EIF3A
TAF12ENSG00000120656.7733.72380575.372800.350602.320101.56690K562EIF4A3
TAF12ENSG00000120656.71306.042601571.88840-0.267302.436801.55160K562EIF4G2
TAF12ENSG00000120656.7732.292501189.42930-0.699808.560206.97460K562FIP1L1
TAF12ENSG00000120656.71161.77330817.915400.506202.614601.52490K562FKBP4
TAF12ENSG00000120656.71465.378301125.438200.380703.441202.59980K562GRSF1
TAF12ENSG00000120656.71233.11350942.288900.388002.804702.20400K562HNRNPC
TAF12ENSG00000120656.7538.67240774.10110-0.523103.918402.41390K562HNRNPK
TAF12ENSG00000120656.71809.306901372.635400.398403.118101.98940K562HNRNPL
TAF12ENSG00000120656.71622.85900978.304200.730108.076806.34530K562HNRNPM
TAF12ENSG00000120656.72234.188501612.639300.470204.935903.88260K562HSPD1
TAF12ENSG00000120656.71448.406001173.908800.303004.460003.53800K562NSUN2
TAF12ENSG00000120656.7326.46920724.76580-1.1506016.2727013.79140K562PCBP2
TAF12ENSG00000120656.71985.858201228.080500.693307.986906.57470K562PCBP3
TAF12ENSG00000120656.71463.19080941.975800.635309.659208.20020K562POLR2G
TAF12ENSG00000120656.7615.92040791.43350-0.361702.813302.14400K562PTBP1
TAF12ENSG00000120656.71379.382301715.05120-0.314202.357401.60450K562PUF60
TAF12ENSG00000120656.7856.97670618.979300.469303.021002.16730K562RPS19
TAF12ENSG00000120656.71169.98620839.335100.479104.786103.35850K562SAFB
TAF12ENSG00000120656.7525.36230737.48850-0.489304.668703.54680K562SF3B4
TAF12ENSG00000120656.7515.72990687.47380-0.414702.379201.37700K562U2AF1
TAF12ENSG00000120656.7500.07820710.03680-0.505704.743503.69630K562U2AF2
TAF12ENSG00000120656.71023.770701244.72260-0.281903.008802.25960K562UPF1
TAF12ENSG00000120656.7996.550601274.85260-0.355302.911302.02250K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TAF12 is not available on ENCORE database.





4 RBPs can affect the splicing of TAF12 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSTAF12ENSG00000120656.7chr1-2894446428944620289444642894454228948425289485710.093000.000000.00000longerK562AQR
MXETAF12ENSG00000120656.7chr1-28944464289445422894842528948677289397582893987328969503289695780.136000.001030.034791includedK562UCHL5
MXETAF12ENSG00000120656.7chr1-28931883289319722894446428944563289296122893008628948425289486770.083000.000000.000001includedK562AQR
MXETAF12ENSG00000120656.7chr1-28944464289445422894842528948677289397582893987328969503289695780.146000.001260.063711includedK562LARP7
MXETAF12ENSG00000120656.7chr1-28944464289445422894842528948677289397582893987328969503289695780.165000.000900.047611includedK562PHF6

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TAF12 is not avaliable on ENCORE database.