ST20-MTHFS

General Information

Gene Name       : ST20-MTHFS
Gene ID             : ENSG00000259332.3
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ST20-MTHFS)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ST20-MTHFSENSG00000259332.313.487.2810.38ENCSR000AEF
HepG2ST20-MTHFSENSG00000259332.31.266.513.88ENCSR985KAT
K562ST20-MTHFSENSG00000259332.30.797.143.96ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ST20-MTHFS is not avaliable on ENCORE database.



Proteins bound to RNA
  • ST20-MTHFS RNA is bound by 31 proteins.  







eCLIP assay for ST20-MTHFS is not avaliable on ENCORE database.





31 proteins are bound to ST20-MTHFS RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr158013745280137539-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.1634910.27880K562PABPC4
chr158021598380215998-5'-UTR,intron-Distal3.697544.08412K562RBM15
chr158021595980215983-5'-UTR,intron-Distal4.549176.37184K562RBM15
chr158021581280215859-5'-UTR,intron-Distal3.922547.34424K562CSTF2T
chr158021599880216009-5'-UTR,intron-Distal3.604373.04831K562RBM15
chr158021583580215895-5'-UTR,intron-Distal6.2367114.27145K562RBM15
chr158021598280216063-5'-UTR,intron-Distal,intron-Proximal3.759593.61584HepG2SRSF1
chr158021594580215959-5'-UTR,intron-Distal3.784143.04831K562RBM15
chr158021569380215810-5'-UTR,intron-Distal3.551034.65185K562SRSF1
chr158021583580215890-5'-UTR,intron-Distal5.119387.07194HepG2RBM15
chr158013775380137801-CDS,intron-Distal,intron-Proximal4.300997.29386HepG2U2AF2
chr158013763280137748-CDS,intron-Distal,intron-Proximal4.337923.90287K562LIN28B
chr158018152580181641-3'-UTR,CDS,intron-Distal5.001498.32768HepG2GRWD1
chr158013774480137776-CDS,intron-Distal,intron-Proximal3.689866.44666K562U2AF2
chr158013774480137797-CDS,intron-Distal,intron-Proximal4.500844.52791K562U2AF1
chr158018155480181603-3'-UTR,CDS,intron-Distal3.869373.67607K562YBX3
chr158017724780177309-intron-Distal3.221944.86332HepG2SUGP2
chr158017698480177031-intron-Distal4.016543.39864HepG2SUGP2
chr158017679580176825-intron-Distal4.062503.16028HepG2SUGP2
chr158021509380215228-intron-Distal3.261399.61604K562DROSHA
chr158021541180215477-intron-Distal3.313683.46269K562XRCC6
chr158021550680215567-intron-Distal3.363925.12435HepG2PRPF4
chr158021541580215498-intron-Distal3.343723.65183HepG2XRN2
chr158021243680212489-intron-Distal4.191113.60290K562AKAP8L
chr158018348280183588-intron-Distal3.419616.79980HepG2SUGP2
chr158021538580215513-intron-Distal4.4078318.29963K562DROSHA
chr158021540980215501-intron-Distal3.1162112.65647K562CSTF2T
chr158021540880215495-intron-Distal3.086755.91000HepG2NKRF
chr158017642680176559-intron-Distal4.939566.23638HepG2QKI
chr158018328380183396-intron-Distal3.385023.10640HepG2SUGP2
chr158020973180209906-intron-Distal3.099243.90716K562KHDRBS1
chr158021540280215484-intron-Distal3.625185.57868K562DDX6
chr158021539580215510-intron-Distal3.500658.38945HepG2CSTF2T
chr158021540780215506-intron-Distal4.0368713.05353HepG2PRPF4
chr158021542280215541-intron-Distal3.399894.51419K562FUS
chr158018121280181371-intron-Distal,intron-Proximal3.335758.56786K562KHSRP
chr158018916880189339-5'-UTR,CDS,intron-Distal3.999908.84023K562ZNF622
chr158017739280177442-intron-Distal4.296254.78128HepG2SUGP2
chr158021518580215245-intron-Distal3.481884.01575K562NONO
chr158021491180215002-intron-Distal3.067773.42451K562FUS
chr158021543380215594-intron-Distal3.361935.04221K562XRN2
chr158021489880214982-intron-Distal3.013243.57774K562EWSR1
chr158021520180215285-intron-Distal3.343675.00504HepG2PRPF4
chr158017717480177290-intron-Distal3.498924.61500HepG2HNRNPM
chr158021538680215508-intron-Distal5.800409.60274K562GTF2F1
chr158021515280215296-intron-Distal3.422673.82735K562EWSR1
chr158021503680215152-intron-Distal3.929993.67595K562EWSR1
chr158021513980215251-intron-Distal3.167358.31176K562CSTF2T
chr158020608180206182-intron-Distal4.934627.27974HepG2QKI
chr158018118480181351-intron-Distal,intron-Proximal5.217697.22833HepG2KHSRP
chr158021500280215126-intron-Distal4.218354.16295K562FUS
chr158021517380215245-intron-Distal3.207345.43751K562GTF2F1
chr158021539680215499-intron-Distal3.354404.22029HepG2DROSHA
chr158021549880215558-intron-Distal3.414784.23548HepG2RBM15
chr158021518880215265-intron-Distal4.235093.30705HepG2GTF2F1
chr158013736280137489-3'-UTR,intron-Distal,intron-Proximal3.509036.34584K562PUM2
chr158021526580215342-intron-Distal3.817784.94042K562NONO
chr158021504680215111-intron-Distal3.113163.68953K562NONO
chr158021540080215501-intron-Distal3.594798.09998K562AKAP8L
chr158018919480189359-5'-UTR,CDS,intron-Distal,intron-Proximal3.6999115.13050K562DDX3X
chr158021541280215453-intron-Distal3.909423.80946K562DDX52
chr158017645280176487-intron-Distal3.839983.29248HepG2SUGP2
chr158021528280215363-intron-Distal5.4415211.90376K562CSTF2T
chr158018111380181212-intron-Distal4.885547.91159K562KHSRP
chr158014167180141774-intron-Distal3.386283.98726HepG2RBFOX2
chr158018917480189349-5'-UTR,CDS,intron-Distal,intron-Proximal4.103193.86058K562GRWD1
chr158021530080215318-intron-Distal4.826393.11886K562DROSHA
chr158021541680215503-intron-Distal3.096674.85044HepG2GTF2F1
chr158021502880215130-intron-Distal3.7064211.50274K562CSTF2T
chr158021507680215156-intron-Distal4.040326.02098HepG2PRPF4
chr158021544280215507-intron-Distal3.662037.82518K562GEMIN5
chr158021550480215549-intron-Distal3.372005.87066K562CSTF2T
chr158018913680189277-5'-UTR,CDS,intron-Distal3.599385.58683HepG2GRWD1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ST20-MTHFS is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ST20-MTHFS is not available on ENCORE database.

  • 31 RBPs can affect the levels of ST20-MTHFS.  








The Knockdown/knockout RNA-Seq assay for ST20-MTHFS is not available on ENCORE database.





31 RBPs can affect the gene expression of ST20-MTHFS :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ST20-MTHFSENSG00000259332.211.342000.0000099999.999903.083602.05150HepG2CCAR1
ST20-MTHFSENSG00000259332.231.920003.001303.410705.248304.40990HepG2DDX3X
ST20-MTHFSENSG00000259332.220.091502.569002.967203.028602.38530HepG2DDX6
ST20-MTHFSENSG00000259332.223.376202.478703.237303.919903.22140HepG2EIF2S1
ST20-MTHFSENSG00000259332.237.7009014.393001.389102.440601.86930HepG2ETF1
ST20-MTHFSENSG00000259332.220.810602.578603.012603.144502.40090HepG2HNRNPK
ST20-MTHFSENSG00000259332.215.426102.607402.564602.129101.52730HepG2IGF2BP2
ST20-MTHFSENSG00000259332.28.126800.0000099999.999902.127301.40710HepG2LARP4
ST20-MTHFSENSG00000259332.233.272902.755903.593705.978705.02540HepG2MAGOH
ST20-MTHFSENSG00000259332.243.838502.840503.947904.184203.41040HepG2NCBP2
ST20-MTHFSENSG00000259332.219.845904.781002.053402.062101.57720HepG2PTBP1
ST20-MTHFSENSG00000259332.222.017604.980302.144202.266401.72450HepG2SF3B4
ST20-MTHFSENSG00000259332.210.587500.0000099999.999902.467401.99030HepG2TIAL1
ST20-MTHFSENSG00000259332.212.937600.0000099999.999903.724103.09120HepG2TRIM56
ST20-MTHFSENSG00000259332.22.7838015.73400-2.498701.918801.38490HepG2U2AF1
ST20-MTHFSENSG00000259332.217.251501.319203.708903.233901.89750K562ABCF1
ST20-MTHFSENSG00000259332.213.263800.936303.824302.925001.83830K562CSTF2
ST20-MTHFSENSG00000259332.223.257404.811902.272902.580901.88170K562EIF2S2
ST20-MTHFSENSG00000259332.28.002000.0000099999.999902.270601.36700K562IGF2BP2
ST20-MTHFSENSG00000259332.211.881100.0000099999.999903.813202.81810K562MAGOH
ST20-MTHFSENSG00000259332.216.811501.079803.960503.836702.84760K562PPIG
ST20-MTHFSENSG00000259332.28.556400.0000099999.999902.682601.33520K562RBM34
ST20-MTHFSENSG00000259332.214.215500.0000099999.999903.929902.03230K562SBDS
ST20-MTHFSENSG00000259332.216.041800.0000099999.999904.528802.25440K562SMN1
ST20-MTHFSENSG00000259332.27.3354027.30600-1.896302.608201.69440K562SRPK2
ST20-MTHFSENSG00000259332.214.172900.0000099999.999904.208203.34410K562SRSF1
ST20-MTHFSENSG00000259332.219.611900.0000099999.999904.546403.14020K562SRSF4
ST20-MTHFSENSG00000259332.213.578700.0000099999.999902.801201.74440K562SRSF5
ST20-MTHFSENSG00000259332.20.0000031.85540-99999.999994.455901.91770K562SUGP2
ST20-MTHFSENSG00000259332.20.000006.92100-99999.999992.025601.32330K562SYNCRIP
ST20-MTHFSENSG00000259332.214.597800.0000099999.999902.298501.65050K562TARDBP
ST20-MTHFSENSG00000259332.211.101200.0000099999.999902.676901.87370K562TIA1
ST20-MTHFSENSG00000259332.215.972700.0000099999.999904.858003.33360K562TRA2A
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ST20-MTHFS is not available on ENCORE database.






No RBPs affect the alternative splcing events of ST20-MTHFS on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ST20-MTHFS is not avaliable on ENCORE database.