SLC25A21

General Information

Gene Name       : SLC25A21
Gene ID             : ENSG00000183032.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC25A21)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC25A21ENSG00000183032.110.000.040.02ENCSR000AEF
HepG2SLC25A21ENSG00000183032.110.921.161.04ENCSR985KAT
K562SLC25A21ENSG00000183032.1114.5414.4514.49ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC25A21 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC25A21 RNA is bound by 18 proteins.  







eCLIP assay for SLC25A21 is not avaliable on ENCORE database.





18 proteins are bound to SLC25A21 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr143764173937641854-5'-UTR,intron-Distal3.323226.73521K562DDX3X
chr143764162637641704-5'-UTR,intron-Distal,intron-Proximal4.904145.51215K562RBM15
chr143719871137198759-CDS,intron-Distal,intron-Proximal3.691293.25175K562YBX3
chr143762334537623496-intron-Distal3.515273.09339K562MATR3
chr143727994637280108-intron-Distal3.524604.12870K562PTBP1
chr143750992837510001-intron-Distal3.898839.17512K562PTBP1
chr143748831537488397-intron-Distal3.983283.22483K562SAFB2
chr143747431437474421-intron-Distal4.8059311.48607K562TARDBP
chr143760231037602390-intron-Distal3.741184.06709K562EIF4G2
chr143750949737509544-intron-Distal4.928286.19339K562PTBP1
chr143763012337630200-intron-Distal5.195196.57498HepG2PCBP2
chr143752593037526026-intron-Distal3.739835.94848K562TARDBP
chr143752975737529833-intron-Distal4.197943.69425K562TARDBP
chr143746329037463354-intron-Distal4.359336.10779K562QKI
chr143762727137627369-intron-Distal3.630954.56666K562HNRNPM
chr143757852537578614-intron-Distal4.757544.51355HepG2PTBP1
chr143728156037281640-intron-Distal3.038093.31830K562KHSRP
chr143761266637612857-intron-Distal4.0174511.01982K562HNRNPL
chr143757488837575012-intron-Distal5.8618032.08517K562QKI
chr143757292037573008-intron-Distal4.529665.08344K562TARDBP
chr143763010337630182-intron-Distal4.4628613.69296K562PTBP1
chr143755035937550438-intron-Distal3.856053.49896K562KHDRBS1
chr143757851637578556-intron-Distal5.8677634.60767K562PTBP1
chr143726757537267587-intron-Distal5.516749.20299K562NSUN2
chr143762602337626084-intron-Distal4.965795.76606K562EXOSC5
chr143750039337500489-intron-Distal4.553669.39320K562TARDBP
chr143762331137623358-intron-Distal4.428794.80466K562EXOSC5
chr143762309737623145-intron-Distal3.129574.19275K562EXOSC5
chr143762620137626258-intron-Distal4.169585.50856K562EXOSC5
chr143763490737635008-intron-Distal3.118666.34887K562DGCR8
chr143762671737626747-intron-Distal3.476323.43829K562EXOSC5
chr143723001637230111-intron-Distal6.2293014.59132K562PTBP1
chr143762971137629801-intron-Distal3.699549.50007K562PTBP1
chr143746600037466081-intron-Distal3.522375.09606K562PTBP1
chr143762340937623449-intron-Distal4.709726.09831K562HNRNPM
chr143757783437577929-intron-Distal5.1428210.67463K562HNRNPL
chr143755555837555699-intron-Distal4.101103.80954K562HNRNPL
chr143762238037622432-intron-Distal3.919573.23532K562MATR3
chr143763485437634902-intron-Distal3.796086.72972K562DGCR8
chr143762563237625703-intron-Distal3.803115.56048K562KHSRP
chr143722952137229558-intron-Distal5.259767.34317K562PTBP1
chr143764087537640990-intron-Distal3.756393.39089K562KHDRBS1
chr143762304037623097-intron-Distal4.653416.08869K562EXOSC5
chr143757480037574861-intron-Distal4.996284.17759HepG2QKI
chr143723319737233254-intron-Distal5.393085.43236K562PTBP1
chr143752339037523459-intron-Distal3.851993.69113K562LIN28B
chr143762681937626848-intron-Distal4.783296.41216K562EXOSC5
chr143762670437626747-intron-Distal3.693543.97268K562PTBP1
chr143730604837306139-intron-Distal3.428283.30744K562PTBP1
chr143757725337577319-intron-Distal3.996874.27660K562HNRNPL
chr143726758737267599-intron-Distal5.516749.20299K562NSUN2
chr143762333537623376-intron-Distal5.3673219.68761K562HNRNPM
chr143762636937626407-intron-Distal3.451505.57520K562EXOSC5
chr143757480937574866-intron-Distal5.6020419.33988K562QKI
chr143750935937509407-intron-Distal6.030219.66407K562PTBP1
chr143762290937622983-intron-Distal4.296108.04287K562HNRNPM
chr143761495737615019-intron-Distal4.130488.23610K562TARDBP
chr143756381737563887-intron-Distal4.474574.38266K562TARDBP
chr143728296437283081-intron-Distal,intron-Proximal4.107853.25538K562KHSRP
chr143748597137486088-intron-Distal3.241186.55120K562SAFB2
chr143757855637578615-intron-Distal5.6282439.23549K562PTBP1
chr143762728337627386-intron-Distal6.1922215.98693K562EXOSC5
chr143761459737614667-intron-Distal4.739305.30489K562TARDBP
chr143744189537441975-intron-Distal3.582343.27944K562PTBP1
chr143762600637626120-intron-Distal3.264036.04536K562KHSRP
chr143762747137627539-intron-Distal3.083353.43871K562MATR3
chr143742782037427904-intron-Distal3.194014.96728K562TARDBP
chr143756205737562149-intron-Distal5.078866.71516K562TARDBP
chr143760229537602385-intron-Distal6.1990616.27819K562TARDBP
chr143762670837626771-intron-Distal4.497564.49973K562MATR3
chr143756373537563817-intron-Distal5.114947.20766K562TARDBP
chr143746319637463269-intron-Distal6.4335211.26038K562QKI
chr143763567737635775-intron-Distal3.191645.80260K562HNRNPL
chr143762336737623480-intron-Distal3.997168.47592K562EXOSC5
chr143762304737623113-intron-Distal4.526669.03730K562HNRNPM
chr143762864437628706-intron-Distal5.118218.36828K562EXOSC5
chr143760821637608347-intron-Distal3.588784.98593K562KHSRP
chr143762726037627401-intron-Distal4.385067.19049K562MATR3
chr143762367737623780-intron-Distal4.676607.01496K562KHSRP
chr143763873337638811-intron-Distal4.1098911.95656K562TARDBP
chr143748576837485832-intron-Distal3.846473.12651K562SAFB2
chr143756526237565383-intron-Distal4.125204.37030K562KHSRP
chr143762337637623400-intron-Distal6.2194917.94894K562HNRNPM
chr143762679837626847-intron-Distal3.896753.33944K562MATR3
chr143762684837626920-intron-Distal5.5812111.66247K562EXOSC5
chr143755259837552701-intron-Distal4.752835.44709K562KHSRP
chr143762545637625514-intron-Distal3.793723.26999K562KHSRP
chr143759757137597668-intron-Distal3.322904.48570K562HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC25A21 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC25A21 is not available on ENCORE database.

  • 60 RBPs can affect the levels of SLC25A21.  








The Knockdown/knockout RNA-Seq assay for SLC25A21 is not available on ENCORE database.





60 RBPs can affect the gene expression of SLC25A21 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC25A21ENSG00000183032.6210.5322048.599702.1149013.6079012.52060HepG2AKAP1
SLC25A21ENSG00000183032.668.2498023.111401.562104.365803.63430HepG2BOP1
SLC25A21ENSG00000183032.671.6884039.115300.873902.130901.46770HepG2DAZAP1
SLC25A21ENSG00000183032.652.9089022.925601.206502.437101.58460HepG2DDX24
SLC25A21ENSG00000183032.6156.7256046.565001.750809.354908.26290HepG2DDX3X
SLC25A21ENSG00000183032.615.6081038.45400-1.300801.955201.44690HepG2EIF2S1
SLC25A21ENSG00000183032.664.5449033.512000.945502.187601.44510HepG2EWSR1
SLC25A21ENSG00000183032.63.9170027.13190-2.792203.360502.51940HepG2FIP1L1
SLC25A21ENSG00000183032.686.4591035.191001.296704.262303.61500HepG2PTBP1
SLC25A21ENSG00000183032.6133.8100048.992501.449506.964606.23100HepG2RBM22
SLC25A21ENSG00000183032.675.7081039.171300.950601.913601.44490HepG2NELFE
SLC25A21ENSG00000183032.679.4301036.653701.115602.897402.29520HepG2SF3B4
SLC25A21ENSG00000183032.6220.1594055.336001.9922018.0719017.08830HepG2SRFBP1
SLC25A21ENSG00000183032.691.4220038.252301.256903.801703.26960HepG2SRSF1
SLC25A21ENSG00000183032.6118.5190048.046301.302506.241505.52830HepG2SSB
SLC25A21ENSG00000183032.613.9052036.15960-1.378802.169501.40170HepG2TUFM
SLC25A21ENSG00000183032.653.7162020.001501.425102.661002.00110HepG2ZC3H8
SLC25A21ENSG00000183032.6442.56980611.18670-0.465704.251203.57380K562AGGF1
SLC25A21ENSG00000183032.6397.01870635.95470-0.679706.429505.40280K562AKAP8L
SLC25A21ENSG00000183032.6553.033901087.81020-0.9760013.2973012.14650K562AQR
SLC25A21ENSG00000183032.6430.71570547.08850-0.345002.547101.62920K562BCLAF1
SLC25A21ENSG00000183032.6296.43580522.70510-0.818306.493504.26780K562BUD13
SLC25A21ENSG00000183032.6155.09390250.27880-0.690403.750102.48490K562CCAR1
SLC25A21ENSG00000183032.6544.69170730.44320-0.423303.659702.27690K562CCDC124
SLC25A21ENSG00000183032.6393.31980724.06250-0.880402.243201.30560K562CNOT7
SLC25A21ENSG00000183032.6222.36870336.42170-0.597303.694902.79030K562CPSF6
SLC25A21ENSG00000183032.6310.47620415.04830-0.418802.590601.57250K562CSTF2
SLC25A21ENSG00000183032.6852.43920719.256500.245001.918301.35710K562DDX47
SLC25A21ENSG00000183032.6312.51550439.62780-0.492403.786702.19040K562DDX6
SLC25A21ENSG00000183032.6702.78860447.944500.649704.456202.79770K562EEF2
SLC25A21ENSG00000183032.6257.49020432.80270-0.749205.492904.18040K562EFTUD2
SLC25A21ENSG00000183032.6535.82370729.74270-0.445602.777602.05720K562EIF2S2
SLC25A21ENSG00000183032.6282.89210395.42940-0.483202.929501.59310K562EWSR1
SLC25A21ENSG00000183032.6262.82930382.51320-0.541403.560202.09950K562EXOSC5
SLC25A21ENSG00000183032.6391.08640539.43470-0.464002.979002.09700K562FIP1L1
SLC25A21ENSG00000183032.6191.59200345.10080-0.849005.579503.87600K562FKBP4
SLC25A21ENSG00000183032.6217.25770342.29250-0.655803.948602.92370K562FMR1
SLC25A21ENSG00000183032.6394.34490536.77750-0.444903.444502.17250K562GLRX3
SLC25A21ENSG00000183032.6681.96530972.58210-0.512102.124701.45690K562GRSF1
SLC25A21ENSG00000183032.6430.36370730.48660-0.763302.749701.53640K562HNRNPA2B1
SLC25A21ENSG00000183032.6260.68060397.80560-0.609803.865603.17490K562HNRNPC
SLC25A21ENSG00000183032.61033.16150623.218800.729206.322204.39530K562HNRNPK
SLC25A21ENSG00000183032.6407.08590668.14830-0.714807.056905.62780K562HNRNPU
SLC25A21ENSG00000183032.6441.07060654.44130-0.569305.219703.90160K562MATR3
SLC25A21ENSG00000183032.6583.13650756.11010-0.374802.938501.99350K562MBNL1
SLC25A21ENSG00000183032.6835.664401225.14670-0.552005.104903.57510K562MSI2
SLC25A21ENSG00000183032.6377.54190564.35220-0.580005.888104.74050K562MTPAP
SLC25A21ENSG00000183032.6309.47690452.37970-0.547704.008702.51110K562NCBP2
SLC25A21ENSG00000183032.6456.67600627.04240-0.457404.839203.89010K562NSUN2
SLC25A21ENSG00000183032.6451.35070640.91920-0.505904.382802.64920K562PCBP1
SLC25A21ENSG00000183032.61007.561101306.97160-0.375403.850302.71430K562PUM2
SLC25A21ENSG00000183032.6499.98430614.52820-0.297601.961901.44770K562RBM15
SLC25A21ENSG00000183032.6368.69820610.97640-0.728707.103205.68180K562RBM22
SLC25A21ENSG00000183032.6263.33000428.37690-0.702003.058001.65260K562RBM25
SLC25A21ENSG00000183032.6626.48980430.626100.540802.965701.58880K562RRP9
SLC25A21ENSG00000183032.6259.15020584.92120-1.174503.718302.25880K562SF1
SLC25A21ENSG00000183032.6401.20150618.73620-0.625006.986405.73590K562SF3A3
SLC25A21ENSG00000183032.6236.79280713.40440-1.591106.363304.05120K562SFPQ
SLC25A21ENSG00000183032.6345.54780671.40500-0.958303.065901.74870K562SNRNP200
SLC25A21ENSG00000183032.6296.85350624.54220-1.0730014.3120012.69990K562SRSF1
SLC25A21ENSG00000183032.6431.78610609.73630-0.497903.960102.95650K562TIA1
SLC25A21ENSG00000183032.6266.35890364.33600-0.451902.311701.45870K562TRIM56
SLC25A21ENSG00000183032.6267.99070431.58600-0.687504.640903.28740K562UCHL5
SLC25A21ENSG00000183032.6544.79420664.86660-0.287402.104801.47130K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC25A21 is not available on ENCORE database.





5 RBPs can affect the splicing of SLC25A21 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESLC25A21ENSG00000183032.6chr14-371539483715413037153032371530853718052237180687-0.150000.001070.02220excludedK562SRSF1
SESLC25A21ENSG00000183032.6chr14-371987113719877137194774371948823720371137203778-0.143000.001490.02912excludedK562SF3B4
SESLC25A21ENSG00000183032.6chr14-371987113719877137194774371948823720371137203778-0.107000.000010.00018excludedK562AQR
SESLC25A21ENSG00000183032.6chr14-371987113719877137194774371948823720371137203778-0.077000.000860.05704excludedK562HNRNPL
SESLC25A21ENSG00000183032.6chr14-371987113719877137194774371948823720371137203778-0.112000.000800.03159excludedK562TARDBP
A3SSSLC25A21ENSG00000183032.6chr14-3715303237153119371530323715308537153948371541300.057000.006180.03483longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SLC25A21 is not avaliable on ENCORE database.