RP11-598P20.5

General Information

Gene Name : RP11-598P20.5
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-598P20.5)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-598P20.5 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-598P20.5 RNA is bound by 25 proteins.

eCLIP assay for RP11-598P20.5 is not avaliable on ENCORE database.

25 proteins are bound to RP11-598P20.5 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	42924639	42924700	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.73016	4.40745	K562	SF3B4
chr8	42914180	42914268	+	5'-UTR,CDS,intron-Distal,intron-Proximal	6.16015	14.18173	K562	SF3B4
chr8	42924791	42924842	+	5'-UTR,CDS,intron-Proximal	4.45624	4.62947	HepG2	AQR
chr8	42914187	42914252	+	5'-UTR,CDS,intron-Distal,intron-Proximal	4.55347	11.16049	K562	KHSRP
chr8	42914198	42914260	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.72004	3.77017	HepG2	CSTF2
chr8	42873500	42873576	+	3'-UTR,CDS,intron-Proximal	3.71566	6.39464	HepG2	BCLAF1
chr8	42873548	42873669	+	3'-UTR,CDS,intron-Proximal	3.19883	4.24070	HepG2	GRWD1
chr8	42932358	42932530	+	3'-UTR,CDS,intron-Proximal	3.65955	6.20035	HepG2	BCLAF1
chr8	42924733	42924774	+	3'-UTR,5'-UTR,CDS	3.86741	3.38114	HepG2	GRWD1
chr8	42924753	42924806	+	5'-UTR,CDS,intron-Proximal	3.37282	3.28366	HepG2	BCLAF1
chr8	42927317	42927391	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.72304	5.23259	HepG2	BCLAF1
chr8	42914153	42914256	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.65253	8.53988	HepG2	KHSRP
chr8	42919262	42919364	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.43770	3.59112	HepG2	PPIG
chr8	42874061	42874133	+	3'-UTR,intron-Distal	3.99246	3.92684	K562	KHSRP
chr8	42878586	42878651	+	3'-UTR,intron-Distal	3.88621	12.40547	K562	PCBP1
chr8	42913241	42913286	+	intron-Distal	3.17260	3.90146	K562	KHSRP
chr8	42911475	42911554	+	5'-UTR,CDS,intron-Distal	5.62344	4.56463	K562	GEMIN5
chr8	42873844	42873956	+	3'-UTR,intron-Distal	3.30010	9.74899	K562	PUM2
chr8	42917202	42917276	+	intron-Distal	4.20134	3.35169	HepG2	U2AF2
chr8	42878598	42878675	+	3'-UTR,intron-Distal	5.32289	17.91501	HepG2	PCBP2
chr8	42874597	42874685	+	3'-UTR,intron-Distal	5.13481	26.37577	K562	QKI
chr8	42911655	42911716	+	CDS,intron-Distal,intron-Proximal	3.97515	3.48187	K562	RBM15
chr8	42914582	42914639	+	intron-Distal	3.96339	7.27961	HepG2	CSTF2
chr8	42911786	42911864	+	5'-UTR,intron-Distal,intron-Proximal	3.24331	4.04108	HepG2	XPO5
chr8	42878912	42878957	+	3'-UTR,intron-Distal	3.46822	3.61097	K562	ILF3
chr8	42878553	42878674	+	3'-UTR,intron-Distal	4.43213	24.88137	K562	U2AF2
chr8	42881513	42881578	+	3'-UTR,intron-Distal	4.46689	5.66560	K562	TIA1
chr8	42875564	42875639	+	3'-UTR,intron-Distal	3.84888	3.71997	HepG2	ILF3
chr8	42874629	42874695	+	3'-UTR,intron-Distal	5.40029	18.83782	HepG2	QKI
chr8	42919073	42919129	+	intron-Distal	3.57840	3.02234	K562	KHSRP
chr8	42883347	42883420	+	3'-UTR,intron-Distal	3.58680	9.76503	K562	FAM120A
chr8	42885167	42885260	+	3'-UTR,intron-Distal	4.18971	4.43679	K562	IGF2BP1
chr8	42881760	42881920	+	3'-UTR,intron-Distal	3.51001	4.81657	K562	IGF2BP1
chr8	42878588	42878664	+	3'-UTR,intron-Distal	5.49231	58.59353	K562	PTBP1
chr8	42873901	42873964	+	3'-UTR,intron-Distal	4.39885	6.93714	HepG2	FUBP3
chr8	42921160	42921267	+	intron-Distal	4.07886	10.42483	K562	PTBP1
chr8	42911657	42911730	+	CDS,intron-Distal,intron-Proximal	3.61445	11.94608	HepG2	PRPF8
chr8	42917319	42917374	+	intron-Distal	4.35891	4.92524	K562	TARDBP
chr8	42924576	42924634	+	intron-Distal,intron-Proximal	4.91646	14.19617	K562	KHSRP
chr8	42911679	42911732	+	CDS,intron-Distal,intron-Proximal	3.54298	3.54718	K562	PRPF8
chr8	42885237	42885287	+	3'-UTR,intron-Distal	4.60687	8.61496	K562	PUM2
chr8	42874044	42874119	+	3'-UTR,intron-Distal	4.14893	3.20552	HepG2	KHSRP
chr8	42883632	42883704	+	3'-UTR,intron-Distal	4.88921	12.02341	K562	FAM120A
chr8	42878588	42878683	+	3'-UTR,intron-Distal	4.37128	7.97328	HepG2	PCBP1
chr8	42914460	42914549	+	intron-Distal	5.85681	13.77245	HepG2	CSTF2
chr8	42873823	42873901	+	3'-UTR,intron-Distal	3.60604	7.17745	HepG2	FUBP3
chr8	42911816	42911874	+	5'-UTR,intron-Distal	3.70970	6.49817	K562	RBM15
chr8	42878544	42878669	+	3'-UTR,intron-Distal	4.52304	3.02097	K562	U2AF1
chr8	42878588	42878669	+	3'-UTR,intron-Distal	5.77735	71.38312	HepG2	PTBP1
chr8	42874590	42874629	+	3'-UTR,intron-Distal	5.73856	12.21592	HepG2	QKI
chr8	42879108	42879215	+	3'-UTR,intron-Distal	3.23236	5.64172	K562	FAM120A
chr8	42874074	42874128	+	3'-UTR,intron-Distal	5.12857	7.24158	HepG2	FUBP3
chr8	42878583	42878666	+	3'-UTR,intron-Distal	5.44214	24.07042	HepG2	U2AF2
chr8	42913033	42913092	+	intron-Distal	4.49679	3.85055	HepG2	XPO5
chr8	42878601	42878666	+	3'-UTR,intron-Distal	3.86580	3.17235	HepG2	HNRNPK
chr8	42914072	42914153	+	5'-UTR,intron-Distal,intron-Proximal	3.48556	4.54121	HepG2	KHSRP
chr8	42924635	42924694	+	intron-Proximal	4.68388	17.25513	K562	KHSRP
chr8	42914161	42914187	+	5'-UTR,intron-Distal,intron-Proximal	5.47476	11.62275	K562	KHSRP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-598P20.5 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for RP11-598P20.5 is not available on ENCORE database.
53 RBPs can affect the levels of RP11-598P20.5.

The Knockdown/knockout RNA-Seq assay for RP11-598P20.5 is not available on ENCORE database.

53 RBPs can affect the gene expression of RP11-598P20.5 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-598P20.5	ENSG00000254673.1	14.82420	48.52870	-1.71090	3.38520	2.30650	HepG2	DDX59
RP11-598P20.5	ENSG00000254673.1	7.39690	46.32200	-2.64670	2.39850	1.45410	HepG2	DDX5
RP11-598P20.5	ENSG00000254673.1	0.00000	39.02750	-99999.99999	3.21880	2.49810	HepG2	DKC1
RP11-598P20.5	ENSG00000254673.1	0.00000	54.92480	-99999.99999	5.07530	3.99180	HepG2	EIF4G2
RP11-598P20.5	ENSG00000254673.1	45.39730	8.09460	2.48750	5.11340	2.62870	HepG2	GRWD1
RP11-598P20.5	ENSG00000254673.1	0.00000	38.96460	-99999.99999	3.20000	2.15200	HepG2	HDGF
RP11-598P20.5	ENSG00000254673.1	7.14820	46.22380	-2.69300	5.72510	4.85280	HepG2	HNRNPLL
RP11-598P20.5	ENSG00000254673.1	16.31590	66.08990	-2.01810	3.09610	2.45730	HepG2	HNRNPU
RP11-598P20.5	ENSG00000254673.1	16.49580	67.50680	-2.03290	2.69930	1.97460	HepG2	ILF2
RP11-598P20.5	ENSG00000254673.1	0.00000	37.31030	-99999.99999	3.12510	2.04380	HepG2	KIF1C
RP11-598P20.5	ENSG00000254673.1	2.06780	93.14420	-5.49330	24.88920	23.37620	HepG2	PCBP1
RP11-598P20.5	ENSG00000254673.1	0.00000	38.80820	-99999.99999	3.20030	1.34560	HepG2	PES1
RP11-598P20.5	ENSG00000254673.1	34.94010	94.76970	-1.43950	5.53910	4.82070	HepG2	PTBP1
RP11-598P20.5	ENSG00000254673.1	38.00520	102.65500	-1.43350	5.61990	4.77620	HepG2	QKI
RP11-598P20.5	ENSG00000254673.1	7.76010	38.30750	-2.30350	4.03780	1.91860	HepG2	RBM14
RP11-598P20.5	ENSG00000254673.1	52.45020	93.15960	-0.82880	2.38820	1.75670	HepG2	RBM25
RP11-598P20.5	ENSG00000254673.1	0.00000	10.30500	-99999.99999	3.38340	2.28040	HepG2	RBM27
RP11-598P20.5	ENSG00000254673.1	38.11310	105.47630	-1.46860	5.87980	5.13850	HepG2	NELFE
RP11-598P20.5	ENSG00000254673.1	20.49240	98.22470	-2.26100	5.13510	4.32970	HepG2	RECQL
RP11-598P20.5	ENSG00000254673.1	7.68130	36.68080	-2.25560	2.74100	2.07020	HepG2	SF3A3
RP11-598P20.5	ENSG00000254673.1	27.53520	98.68190	-1.84150	7.60570	6.70380	HepG2	SF3B4
RP11-598P20.5	ENSG00000254673.1	29.97710	102.29130	-1.77070	3.96700	2.32870	HepG2	SNRNP200
RP11-598P20.5	ENSG00000254673.1	43.44190	102.99670	-1.24540	4.63740	4.06470	HepG2	SRSF1
RP11-598P20.5	ENSG00000254673.1	11.71020	32.53000	-1.47400	2.34960	1.69770	HepG2	UPF1
RP11-598P20.5	ENSG00000254673.1	7.01950	31.40690	-2.16160	3.40570	2.75300	HepG2	UTP3
RP11-598P20.5	ENSG00000254673.1	0.00000	19.83990	-99999.99999	5.56280	3.82030	K562	AARS
RP11-598P20.5	ENSG00000254673.1	11.90950	49.25950	-2.04830	4.72380	2.92940	K562	BCCIP
RP11-598P20.5	ENSG00000254673.1	15.76550	47.60540	-1.59440	3.37850	2.31270	K562	BCLAF1
RP11-598P20.5	ENSG00000254673.1	0.00000	36.11580	-99999.99999	9.26260	7.18780	K562	CSTF2
RP11-598P20.5	ENSG00000254673.1	145.45530	48.66570	1.57950	3.10960	2.07580	K562	CELF1
RP11-598P20.5	ENSG00000254673.1	51.57970	4.80110	3.42530	7.00720	5.93870	K562	EIF2S2
RP11-598P20.5	ENSG00000254673.1	44.17250	0.92060	5.58430	11.90440	10.16630	K562	EIF4A3
RP11-598P20.5	ENSG00000254673.1	47.12220	7.99020	2.56000	5.40260	2.58160	K562	EIF4G1
RP11-598P20.5	ENSG00000254673.1	0.00000	74.34580	-99999.99999	21.57530	18.95460	K562	FIP1L1
RP11-598P20.5	ENSG00000254673.1	2.23080	18.83710	-3.07800	3.05610	1.85700	K562	FKBP4
RP11-598P20.5	ENSG00000254673.1	63.53220	21.95350	1.53290	3.78940	2.78440	K562	FMR1
RP11-598P20.5	ENSG00000254673.1	43.56720	18.61050	1.22700	2.18870	1.38010	K562	FTO
RP11-598P20.5	ENSG00000254673.1	19.14410	0.86830	4.46250	3.88030	1.73280	K562	FUBP3
RP11-598P20.5	ENSG00000254673.1	58.83260	16.07950	1.87130	2.96460	1.57010	K562	FUS
RP11-598P20.5	ENSG00000254673.1	0.00000	30.50650	-99999.99999	7.38450	5.70240	K562	HNRNPA1
RP11-598P20.5	ENSG00000254673.1	2.87200	21.72380	-2.91910	3.19330	2.55790	K562	HNRNPC
RP11-598P20.5	ENSG00000254673.1	0.00000	33.77370	-99999.99999	8.06780	6.54750	K562	HNRNPU
RP11-598P20.5	ENSG00000254673.1	48.37840	20.10020	1.26710	2.44660	1.62710	K562	METAP2
RP11-598P20.5	ENSG00000254673.1	36.70830	0.92030	5.31770	7.21160	5.26090	K562	NCBP2
RP11-598P20.5	ENSG00000254673.1	0.00000	67.88200	-99999.99999	2.32270	1.43110	K562	PABPN1
RP11-598P20.5	ENSG00000254673.1	2.09980	33.41650	-3.99230	5.42580	3.12480	K562	PKM
RP11-598P20.5	ENSG00000254673.1	35.05110	6.05750	2.53260	4.20530	2.22450	K562	RBM17
RP11-598P20.5	ENSG00000254673.1	0.00000	42.81240	-99999.99999	5.76060	4.49210	K562	RBM22
RP11-598P20.5	ENSG00000254673.1	0.55030	26.85930	-5.60890	6.88450	4.10390	K562	SAFB2
RP11-598P20.5	ENSG00000254673.1	89.20520	16.67810	2.41910	5.96980	3.40820	K562	SND1
RP11-598P20.5	ENSG00000254673.1	1.98770	42.78420	-4.42790	3.85880	2.86980	K562	TIA1
RP11-598P20.5	ENSG00000254673.1	0.00000	21.45990	-99999.99999	6.65600	4.65630	K562	TROVE2
RP11-598P20.5	ENSG00000254673.1	38.57400	1.85070	4.38140	7.64660	6.30690	K562	WDR43
RP11-598P20.5	ENSG00000254673.1	3.25430	30.43900	-3.22550	3.91970	1.95960	K562	XRCC6
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-598P20.5

General Information

Functions

Localization

Domains (AlphaFold: RP11-598P20.5)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-598P20.5 is not avaliable on ENCORE database.

25 proteins are bound to RP11-598P20.5 RNA:

eCLIP assay for RP11-598P20.5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-598P20.5 is not available on ENCORE database.

53 RBPs can affect the gene expression of RP11-598P20.5 :

The Knockdown/knockout RNA-Seq assay for RP11-598P20.5 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP11-598P20.5 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-598P20.5 is not avaliable on ENCORE database.