RP11-499P20.2

General Information

Gene Name : RP11-499P20.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-499P20.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-499P20.2 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-499P20.2 RNA is bound by 5 proteins.

eCLIP assay for RP11-499P20.2 is not avaliable on ENCORE database.

5 proteins are bound to RP11-499P20.2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	18831543	18831661	-	intron-Distal	3.56723	4.66833	HepG2	HNRNPL
chr10	18831064	18831121	-	intron-Distal,intron-Proximal	5.00643	4.90235	K562	SF3B4
chr10	18833600	18833680	-	intron-Distal	4.22415	3.21162	HepG2	HNRNPC
chr10	18829607	18829721	-	intron-Distal	4.29571	24.66683	HepG2	HNRNPL
chr10	18817189	18817256	-	intron-Distal	4.00536	3.50031	HepG2	HNRNPL
chr10	18831031	18831119	-	intron-Distal,intron-Proximal	3.04641	3.56062	K562	U2AF2
chr10	18834509	18834569	-	3'-UTR,intron-Distal	3.25885	6.67026	K562	KHSRP
chr10	18823946	18824048	-	intron-Distal	3.85589	3.60879	K562	HNRNPL
chr10	18829645	18829711	-	intron-Distal	4.02291	13.37908	K562	HNRNPL
chr10	18829866	18829972	-	intron-Distal	5.68752	13.94923	K562	HNRNPL
chr10	18831057	18831118	-	intron-Distal,intron-Proximal	4.52091	8.31636	HepG2	U2AF2
chr10	18834401	18834469	-	intron-Distal,intron-Proximal	3.70134	7.12906	HepG2	U2AF2
chr10	18829912	18829975	-	intron-Distal	3.72181	8.74341	HepG2	HNRNPL
chr10	18833037	18833106	-	intron-Distal	4.11859	3.37631	K562	HNRNPL
chr10	18829601	18829645	-	intron-Distal	3.67350	9.02719	K562	HNRNPL
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-499P20.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-499P20.2 is not available on ENCORE database.
55 RBPs can affect the levels of RP11-499P20.2.

The Knockdown/knockout RNA-Seq assay for RP11-499P20.2 is not available on ENCORE database.

55 RBPs can affect the gene expression of RP11-499P20.2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-499P20.2	ENSG00000240291.1	42.71550	89.27610	-1.06350	3.68060	2.99820	HepG2	ACO1
RP11-499P20.2	ENSG00000240291.1	34.77990	78.20960	-1.16910	2.77300	2.24100	HepG2	AKAP1
RP11-499P20.2	ENSG00000240291.1	107.42320	65.80940	0.70680	1.98980	1.47450	HepG2	BOP1
RP11-499P20.2	ENSG00000240291.1	150.20300	92.99320	0.69160	2.42740	1.70140	HepG2	CALR
RP11-499P20.2	ENSG00000240291.1	33.41970	89.25530	-1.41720	5.63730	4.74950	HepG2	CKAP4
RP11-499P20.2	ENSG00000240291.1	94.84910	214.11150	-1.17470	4.28010	3.32370	HepG2	CNOT7
RP11-499P20.2	ENSG00000240291.1	241.76910	142.38250	0.76380	4.87840	3.93570	HepG2	DAZAP1
RP11-499P20.2	ENSG00000240291.1	48.85190	82.56700	-0.75710	2.30520	1.53930	HepG2	DDX19B
RP11-499P20.2	ENSG00000240291.1	114.63620	64.37290	0.83240	2.32700	1.75640	HepG2	DDX6
RP11-499P20.2	ENSG00000240291.1	136.66470	61.85820	1.14350	4.60580	3.85140	HepG2	EIF2S1
RP11-499P20.2	ENSG00000240291.1	245.05950	140.42760	0.80320	4.09410	3.11300	HepG2	EIF4G1
RP11-499P20.2	ENSG00000240291.1	40.85360	83.58500	-1.03280	2.20450	1.51370	HepG2	FIP1L1
RP11-499P20.2	ENSG00000240291.1	145.26180	60.51970	1.26310	3.49540	2.34910	HepG2	FTO
RP11-499P20.2	ENSG00000240291.1	107.09150	54.14540	0.98380	3.20110	2.35970	HepG2	FUBP3
RP11-499P20.2	ENSG00000240291.1	108.77090	63.98590	0.76540	2.20640	1.60940	HepG2	G3BP1
RP11-499P20.2	ENSG00000240291.1	129.37410	64.83650	0.99660	3.48950	2.70990	HepG2	HNRNPK
RP11-499P20.2	ENSG00000240291.1	129.35710	204.18960	-0.65850	2.67460	1.50840	HepG2	KHDRBS1
RP11-499P20.2	ENSG00000240291.1	127.04490	65.42540	0.95730	3.04580	1.98600	HepG2	KHSRP
RP11-499P20.2	ENSG00000240291.1	140.18100	66.65590	1.07240	2.55640	1.62850	HepG2	MTPAP
RP11-499P20.2	ENSG00000240291.1	211.96680	141.18360	0.58620	2.51100	1.78680	HepG2	NOL12
RP11-499P20.2	ENSG00000240291.1	84.13630	42.55920	0.98320	3.02200	2.21850	HepG2	PRPF4
RP11-499P20.2	ENSG00000240291.1	76.77070	134.75880	-0.81180	3.18410	2.55120	HepG2	PUF60
RP11-499P20.2	ENSG00000240291.1	84.46270	143.03670	-0.76000	3.12440	2.50400	HepG2	PUM1
RP11-499P20.2	ENSG00000240291.1	174.20150	75.73440	1.20160	6.70350	5.79320	HepG2	QKI
RP11-499P20.2	ENSG00000240291.1	119.58670	68.74070	0.79870	2.76870	2.09380	HepG2	RBM25
RP11-499P20.2	ENSG00000240291.1	119.47290	215.16510	-0.84880	3.84570	2.90150	HepG2	RPS3A
RP11-499P20.2	ENSG00000240291.1	107.52290	64.69390	0.73280	1.96810	1.36710	HepG2	SF3B1
RP11-499P20.2	ENSG00000240291.1	40.73540	71.01020	-0.80170	1.88740	1.33860	HepG2	SMN1
RP11-499P20.2	ENSG00000240291.1	25.96100	76.00080	-1.54970	4.56760	3.99790	HepG2	SRSF1
RP11-499P20.2	ENSG00000240291.1	76.24620	133.03590	-0.80310	3.39620	2.71500	HepG2	SRSF5
RP11-499P20.2	ENSG00000240291.1	119.79920	61.83610	0.95400	4.11720	3.46900	HepG2	SRSF9
RP11-499P20.2	ENSG00000240291.1	105.32530	151.31450	-0.52270	2.06510	1.51280	HepG2	SUCLG1
RP11-499P20.2	ENSG00000240291.1	83.37820	170.82110	-1.03470	3.35550	2.18200	HepG2	TBRG4
RP11-499P20.2	ENSG00000240291.1	119.98430	62.76740	0.93470	3.90320	2.91910	HepG2	TIA1
RP11-499P20.2	ENSG00000240291.1	69.36400	131.62800	-0.92420	3.70090	2.67540	HepG2	TUFM
RP11-499P20.2	ENSG00000240291.1	84.46690	32.18430	1.39190	4.96430	3.94130	HepG2	UCHL5
RP11-499P20.2	ENSG00000240291.1	106.24710	49.89580	1.09030	3.07480	2.01740	HepG2	UPF2
RP11-499P20.2	ENSG00000240291.1	98.19480	53.62670	0.87260	2.27940	1.61570	HepG2	XRN2
RP11-499P20.2	ENSG00000240291.1	73.45060	41.99990	0.80630	2.03030	1.44110	HepG2	ZC3H8
RP11-499P20.2	ENSG00000240291.1	34.00040	100.60110	-1.56500	6.14480	5.35070	K562	AGGF1
RP11-499P20.2	ENSG00000240291.1	46.40720	104.67860	-1.17350	4.23990	3.42760	K562	AKAP8L
RP11-499P20.2	ENSG00000240291.1	258.50510	106.97080	1.27290	8.73170	7.78480	K562	AQR
RP11-499P20.2	ENSG00000240291.1	31.09150	68.88730	-1.14770	2.78780	1.87130	K562	EFTUD2
RP11-499P20.2	ENSG00000240291.1	209.71120	132.56970	0.66160	3.41300	2.37270	K562	EIF4G2
RP11-499P20.2	ENSG00000240291.1	35.76390	87.37070	-1.28860	4.23290	3.16680	K562	FIP1L1
RP11-499P20.2	ENSG00000240291.1	48.34790	108.95790	-1.17220	3.14500	1.82000	K562	HNRNPA2B1
RP11-499P20.2	ENSG00000240291.1	116.88170	46.47000	1.33060	5.27420	4.47520	K562	HNRNPC
RP11-499P20.2	ENSG00000240291.1	71.42940	124.45380	-0.80100	2.53870	1.67350	K562	MBNL1
RP11-499P20.2	ENSG00000240291.1	216.05490	141.31060	0.61240	2.56820	1.48270	K562	MSI2
RP11-499P20.2	ENSG00000240291.1	40.73050	95.31900	-1.22670	2.86010	1.84820	K562	PABPN1
RP11-499P20.2	ENSG00000240291.1	50.00140	113.33510	-1.18060	3.22090	1.60060	K562	PPP1R8
RP11-499P20.2	ENSG00000240291.1	240.44040	144.64720	0.73300	3.68120	2.74260	K562	PUF60
RP11-499P20.2	ENSG00000240291.1	218.85230	153.82890	0.50850	2.25860	1.30480	K562	PUM1
RP11-499P20.2	ENSG00000240291.1	44.22280	103.82230	-1.23130	4.13700	3.49270	K562	PUS1
RP11-499P20.2	ENSG00000240291.1	38.62210	117.26970	-1.60230	4.66730	2.53300	K562	RBM39
RP11-499P20.2	ENSG00000240291.1	41.86320	106.28980	-1.34420	3.66250	2.07430	K562	SFPQ
RP11-499P20.2	ENSG00000240291.1	32.09250	100.10860	-1.64130	4.53530	2.84670	K562	SNRNP200
RP11-499P20.2	ENSG00000240291.1	14.81800	52.32330	-1.82010	4.27190	3.39940	K562	SRSF1
RP11-499P20.2	ENSG00000240291.1	129.97330	71.53020	0.86150	3.41780	2.44780	K562	WDR3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-499P20.2 is not available on ENCORE database.

1 RBPs can affect the splicing of RP11-499P20.2 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	RP11-499P20.2	ENSG00000240291.1	chr10	-	18821965	18822029			18802043	18802589	18828122	18828228	0.18800	0.00754	0.08480	included	K562	PUS1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-499P20.2

General Information

Functions

Localization

Domains (AlphaFold: RP11-499P20.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-499P20.2 is not avaliable on ENCORE database.

5 proteins are bound to RP11-499P20.2 RNA:

eCLIP assay for RP11-499P20.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-499P20.2 is not available on ENCORE database.

55 RBPs can affect the gene expression of RP11-499P20.2 :

The Knockdown/knockout RNA-Seq assay for RP11-499P20.2 is not available on ENCORE database.

1 RBPs can affect the splicing of RP11-499P20.2 :

The Knockdown/knockout RNA-Seq assay for RP11-499P20.2 is not avaliable on ENCORE database.