RP11-242C19.2

General Information

Gene Name : RP11-242C19.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-242C19.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-242C19.2 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-242C19.2 RNA is bound by 15 proteins.

eCLIP assay for RP11-242C19.2 is not avaliable on ENCORE database.

15 proteins are bound to RP11-242C19.2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	30738833	30738858	+	3'-UTR,CDS,intron-Distal	3.55112	4.52024	HepG2	PPIG
chrX	30718783	30718845	+	intron-Distal	5.79705	34.60374	HepG2	QKI
chrX	30736652	30736665	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.37147	3.80065	HepG2	PPIG
chrX	30737575	30737626	+	3'-UTR,CDS,intron-Distal	3.94196	31.44670	HepG2	BCLAF1
chrX	30718522	30718575	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.83877	21.32533	HepG2	U2AF2
chrX	30718996	30719021	+	3'-UTR,CDS,intron-Distal	3.48402	8.43208	HepG2	BCLAF1
chrX	30732401	30732467	+	intron-Distal	3.18450	5.59399	HepG2	SUGP2
chrX	30737580	30737645	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.68306	5.50142	HepG2	ZNF800
chrX	30737633	30737649	+	intron-Distal,intron-Proximal	4.39905	10.24470	HepG2	BCLAF1
chrX	30726219	30726253	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.77000	3.93645	HepG2	PPIG
chrX	30727599	30727643	+	intron-Distal	3.23054	3.12255	HepG2	XPO5
chrX	30736635	30736686	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.05735	14.02005	HepG2	U2AF2
chrX	30738176	30738213	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.57736	4.99842	HepG2	PPIG
chrX	30738735	30738750	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.10886	5.73400	HepG2	PPIG
chrX	30718561	30718604	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.49362	5.75540	HepG2	AQR
chrX	30738853	30738859	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.35279	12.39807	HepG2	BCLAF1
chrX	30724867	30724971	+	intron-Distal	3.11168	8.00552	HepG2	HNRNPK
chrX	30733538	30733645	+	intron-Distal	4.04986	3.14375	HepG2	RBFOX2
chrX	30718751	30718783	+	intron-Distal	6.52543	20.80237	HepG2	QKI
chrX	30718579	30718658	+	intron-Distal,intron-Proximal	3.52500	4.81289	HepG2	RBM22
chrX	30726214	30726251	+	3'-UTR,CDS,intron-Distal	4.84609	11.55759	HepG2	BCLAF1
chrX	30737649	30737696	+	intron-Distal,intron-Proximal	3.37568	9.57541	HepG2	BCLAF1
chrX	30738736	30738757	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.01287	8.81299	HepG2	BCLAF1
chrX	30718526	30718579	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.57120	13.28834	HepG2	PRPF8
chrX	30718260	30718293	+	intron-Distal	5.36961	80.47352	HepG2	QKI
chrX	30735563	30735633	+	intron-Distal	3.69078	5.14763	HepG2	HNRNPK
chrX	30718939	30718996	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.83857	19.03886	HepG2	U2AF2
chrX	30736722	30736744	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.37282	7.74581	HepG2	BCLAF1
chrX	30718293	30718318	+	intron-Distal	6.91390	88.81749	HepG2	QKI
chrX	30736653	30736691	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.42611	13.23699	HepG2	BCLAF1
chrX	30732478	30732518	+	intron-Distal	3.68931	4.92676	HepG2	XPO5
chrX	30718218	30718256	+	intron-Distal	3.58949	20.14388	HepG2	QKI
chrX	30738170	30738213	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.38876	10.49889	HepG2	BCLAF1
chrX	30731361	30731426	+	intron-Distal	3.07781	3.47356	HepG2	HNRNPK
chrX	30726302	30726397	+	intron-Distal,intron-Proximal	3.74503	3.35377	HepG2	QKI
chrX	30718163	30718218	+	intron-Distal	4.53061	18.87170	HepG2	QKI
chrX	30718318	30718391	+	intron-Distal	4.87987	50.21392	HepG2	QKI
chrX	30718522	30718605	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.11293	18.14978	HepG2	EFTUD2
chrX	30737535	30737555	+	3'-UTR,CDS,intron-Distal,intron-Proximal	5.63161	11.17302	HepG2	BCLAF1
chrX	30724208	30724263	+	intron-Distal	3.69368	3.53952	HepG2	KHSRP
chrX	30721706	30721761	+	intron-Distal	3.60316	9.91062	HepG2	HNRNPM
chrX	30720558	30720595	+	intron-Distal	5.19504	6.93116	HepG2	QKI
chrX	30736691	30736722	+	3'-UTR,CDS,intron-Distal	3.73551	10.26109	HepG2	BCLAF1
chrX	30738813	30738853	+	3'-UTR,CDS,intron-Distal	3.13266	12.86369	HepG2	BCLAF1
chrX	30735570	30735631	+	intron-Distal	4.68694	5.81617	HepG2	QKI
chrX	30734098	30734210	+	intron-Distal	5.21125	13.93225	HepG2	QKI
chrX	30725647	30725713	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.92086	12.91218	HepG2	U2AF2
chrX	30718895	30718980	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.20076	3.30959	HepG2	AQR
chrX	30729547	30729616	+	intron-Distal	4.15979	10.13167	HepG2	U2AF2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-242C19.2 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for RP11-242C19.2 is not available on ENCORE database.
63 RBPs can affect the levels of RP11-242C19.2.

The Knockdown/knockout RNA-Seq assay for RP11-242C19.2 is not available on ENCORE database.

63 RBPs can affect the gene expression of RP11-242C19.2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-242C19.2	ENSG00000241886.1	28.89420	60.50430	-1.06630	2.24380	1.39170	HepG2	ABCF1
RP11-242C19.2	ENSG00000241886.1	15.13070	47.80150	-1.65960	2.99650	2.44530	HepG2	AKAP1
RP11-242C19.2	ENSG00000241886.1	67.24150	165.65210	-1.30070	4.55160	2.33850	HepG2	APOBEC3C
RP11-242C19.2	ENSG00000241886.1	167.68670	47.64020	1.81540	13.16630	11.86500	HepG2	AUH
RP11-242C19.2	ENSG00000241886.1	80.53040	177.38540	-1.13930	4.88360	3.86270	HepG2	CNOT7
RP11-242C19.2	ENSG00000241886.1	39.05160	14.64310	1.41510	2.29150	1.65800	HepG2	CPSF6
RP11-242C19.2	ENSG00000241886.1	12.33210	49.59970	-2.00790	4.75320	3.89070	HepG2	DDX21
RP11-242C19.2	ENSG00000241886.1	10.33590	45.79350	-2.14750	4.53240	3.74680	HepG2	DDX3X
RP11-242C19.2	ENSG00000241886.1	56.21920	16.62870	1.75730	3.70840	2.58010	HepG2	DDX59
RP11-242C19.2	ENSG00000241886.1	98.45600	39.32990	1.32380	4.15180	3.40680	HepG2	DDX6
RP11-242C19.2	ENSG00000241886.1	30.32290	69.26850	-1.19180	3.13360	2.41980	HepG2	DKC1
RP11-242C19.2	ENSG00000241886.1	5.24430	35.49630	-2.75890	4.82710	3.64060	HepG2	EEF2
RP11-242C19.2	ENSG00000241886.1	132.66600	37.81640	1.81060	8.81500	7.79500	HepG2	EIF2S1
RP11-242C19.2	ENSG00000241886.1	104.40640	55.24160	0.91830	2.72650	1.89460	HepG2	EIF4G1
RP11-242C19.2	ENSG00000241886.1	87.81620	47.31320	0.89210	2.57570	1.46790	HepG2	FASTKD2
RP11-242C19.2	ENSG00000241886.1	22.40940	61.08550	-1.44670	3.13950	2.32500	HepG2	FIP1L1
RP11-242C19.2	ENSG00000241886.1	21.75930	68.89200	-1.66270	4.80060	3.35610	HepG2	FUS
RP11-242C19.2	ENSG00000241886.1	102.44540	39.11410	1.38900	5.14470	4.24930	HepG2	G3BP1
RP11-242C19.2	ENSG00000241886.1	0.91580	25.65000	-4.80780	6.56020	5.18130	HepG2	GEMIN5
RP11-242C19.2	ENSG00000241886.1	2.22810	36.41410	-4.03060	6.96870	6.01160	HepG2	HNRNPA1
RP11-242C19.2	ENSG00000241886.1	93.21750	51.46700	0.85690	2.35740	1.48620	HepG2	HNRNPA2B1
RP11-242C19.2	ENSG00000241886.1	47.10260	21.30890	1.14420	2.31330	1.65320	HepG2	HNRNPF
RP11-242C19.2	ENSG00000241886.1	208.08300	39.59290	2.39370	10.59980	9.31170	HepG2	HNRNPK
RP11-242C19.2	ENSG00000241886.1	86.85580	51.02990	0.76720	2.05690	1.46500	HepG2	HNRNPL
RP11-242C19.2	ENSG00000241886.1	53.43010	15.83850	1.75410	3.79640	3.06940	HepG2	HNRNPLL
RP11-242C19.2	ENSG00000241886.1	10.47110	42.12060	-2.00810	4.29010	3.13050	HepG2	HNRNPM
RP11-242C19.2	ENSG00000241886.1	52.53340	117.01260	-1.15540	3.98920	2.50140	HepG2	HSPD1
RP11-242C19.2	ENSG00000241886.1	87.05430	39.98850	1.12220	2.91460	1.88110	HepG2	KHSRP
RP11-242C19.2	ENSG00000241886.1	56.95310	116.92940	-1.03780	3.43270	2.03760	HepG2	KRR1
RP11-242C19.2	ENSG00000241886.1	14.82720	42.41100	-1.51620	2.51480	1.91060	HepG2	MATR3
RP11-242C19.2	ENSG00000241886.1	14.28990	49.39770	-1.78940	4.06940	3.09530	HepG2	MSI2
RP11-242C19.2	ENSG00000241886.1	36.11530	14.04580	1.36240	1.95130	1.31800	HepG2	NSUN2
RP11-242C19.2	ENSG00000241886.1	96.57960	38.66750	1.32050	4.56390	3.64830	HepG2	PABPC4
RP11-242C19.2	ENSG00000241886.1	61.91850	30.67270	1.01330	2.49050	1.90790	HepG2	PCBP1
RP11-242C19.2	ENSG00000241886.1	18.88930	68.56090	-1.85980	5.39790	3.73800	HepG2	PRPF6
RP11-242C19.2	ENSG00000241886.1	25.87370	73.74590	-1.51110	5.17470	4.38030	HepG2	PUS1
RP11-242C19.2	ENSG00000241886.1	138.62830	33.79770	2.03610	11.57920	10.43120	HepG2	QKI
RP11-242C19.2	ENSG00000241886.1	8.05970	45.71530	-2.50390	5.62260	4.94990	HepG2	RBM22
RP11-242C19.2	ENSG00000241886.1	71.63810	30.67680	1.22350	3.37410	2.63540	HepG2	RBM25
RP11-242C19.2	ENSG00000241886.1	20.66460	52.13140	-1.33500	2.26980	1.38000	HepG2	RBM27
RP11-242C19.2	ENSG00000241886.1	59.76470	32.35730	0.88510	1.83620	1.31940	HepG2	RECQL
RP11-242C19.2	ENSG00000241886.1	3.53470	28.03850	-2.98780	4.65420	3.87920	HepG2	RPS19
RP11-242C19.2	ENSG00000241886.1	11.04440	48.08590	-2.12230	4.41110	3.41330	HepG2	RPS2
RP11-242C19.2	ENSG00000241886.1	60.16860	178.10160	-1.56560	8.99010	7.57690	HepG2	RPS3A
RP11-242C19.2	ENSG00000241886.1	29.42640	73.52410	-1.32110	4.19340	3.35400	HepG2	SF3A3
RP11-242C19.2	ENSG00000241886.1	78.41550	32.49130	1.27100	3.80420	3.12850	HepG2	SF3B4
RP11-242C19.2	ENSG00000241886.1	104.47870	50.81680	1.03970	3.72810	2.93400	HepG2	SLBP
RP11-242C19.2	ENSG00000241886.1	15.62640	41.78570	-1.41900	2.84430	2.19310	HepG2	SMN1
RP11-242C19.2	ENSG00000241886.1	113.56430	64.15670	0.82370	2.64220	1.70750	HepG2	SMNDC1
RP11-242C19.2	ENSG00000241886.1	98.02610	51.63470	0.92470	3.08850	2.56890	HepG2	SRFBP1
RP11-242C19.2	ENSG00000241886.1	47.19010	20.93580	1.17240	2.39350	1.74260	HepG2	SRSF7
RP11-242C19.2	ENSG00000241886.1	249.91480	27.59560	3.17880	7.06980	6.26100	HepG2	SRSF9
RP11-242C19.2	ENSG00000241886.1	124.16180	58.81780	1.07780	3.08940	1.81380	HepG2	SUB1
RP11-242C19.2	ENSG00000241886.1	28.32240	59.52550	-1.07160	2.53700	1.93670	HepG2	SUCLG1
RP11-242C19.2	ENSG00000241886.1	77.36810	30.49370	1.34310	4.20770	3.53810	HepG2	TAF15
RP11-242C19.2	ENSG00000241886.1	39.91680	15.44500	1.36980	2.24510	1.58240	HepG2	TARDBP
RP11-242C19.2	ENSG00000241886.1	30.52600	114.53170	-1.90760	6.98100	5.37200	HepG2	TBRG4
RP11-242C19.2	ENSG00000241886.1	89.58190	28.01110	1.67710	5.95060	4.73300	HepG2	TIA1
RP11-242C19.2	ENSG00000241886.1	13.27290	39.09460	-1.55850	2.93370	2.42170	HepG2	TIAL1
RP11-242C19.2	ENSG00000241886.1	46.44990	16.92050	1.45680	3.56440	2.70610	HepG2	UCHL5
RP11-242C19.2	ENSG00000241886.1	18.49700	62.95230	-1.76700	4.99340	4.22890	HepG2	UTP3
RP11-242C19.2	ENSG00000241886.1	64.09430	159.52490	-1.31550	6.76810	5.06000	HepG2	XPO5
RP11-242C19.2	ENSG00000241886.1	11.90360	69.21390	-2.53970	8.63840	6.87270	HepG2	XRCC6
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-242C19.2

General Information

Functions

Localization

Domains (AlphaFold: RP11-242C19.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-242C19.2 is not avaliable on ENCORE database.

15 proteins are bound to RP11-242C19.2 RNA:

eCLIP assay for RP11-242C19.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-242C19.2 is not available on ENCORE database.

63 RBPs can affect the gene expression of RP11-242C19.2 :

The Knockdown/knockout RNA-Seq assay for RP11-242C19.2 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP11-242C19.2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-242C19.2 is not avaliable on ENCORE database.